rplC GENE
rplC - L3 on 50s
Gene type: protein
organism=Escherichia coli str. K-12 substr. MG1655
Gene - Raw genomic sequence with all regulatory regions
β 210 codons, 210 functional, 184 bonds
Pattern Distribution:
Pattern 3 (Structural (Simple)): 13 (6.2%)
Pattern 5 (Flow (Bonding)): 33 (15.7%)
Pattern 20 (Complex (Coordination)): 82 (39.0%)
Pattern 201 (Spiral Threaders (ΟΒΉ Harmonics)): 16 (7.6%)
Pattern 202 (Pentagon Ricochets (ΟΒ² Harmonics)): 21 (10.0%)
Pattern 203 (Fibonacci Pilers (ΟΒ³ Harmonics)): 10 (4.8%)
Pattern 204 (Golden Harmonic Resonators (Οβ΄ Harmonics)): 19 (9.0%)
Pattern 205 (Geometric Controllers (Οβ Harmonics)): 16 (7.6%)
Junk 66 (DNA's Highway - navigating, timing, scaling, control): 0 (0.0%)
rplC - 50S ribosomal subunit protein L3 BETA Escherichia coli str. K-12 substr. MG1655 Gene name 50S ribosomal subunit protein L3 Symbol rplC Gene ID 947817 Locus tag b3320 Organism Escherichia coli str. K-12 substr. MG1655 Gene type protein-coding Synonym ECK3307 Proteins 1 Refseq summary The L3 protein is a component of the 50S subunit of the ribosome. [More information is available at EcoCyc: EG10866].
πβπ βπ° βποΈ βποΈ πΈπ βποΈ ππ ππ βπ βποΈ βπ πΈπ βπ¬ βπͺ βπ΅ βπ β¬π π΅πΌ, β¬π« πΈβ·οΈ πΈπ₯ βπͺ ππ βπ» πΈπ βπ» βπͺ β¬π πΈβ·οΈ β¬π π΅π― π𧬠π΅π πΈβ·οΈ βπ― ππΏ πΈβ·οΈ ππ π΅πΌ, ββ βπ§ π𧬠βπ₯ β¬π« ββ΅ βπ¬ βπ§ βπ° ππΏ βπ πΈπ πΈπ βποΈ βπ§ ππ ππ βπ§ π𧬠βπ¬ βπ πΈπ πππͺοΈ βποΈ β¬π βπ§ β¬π« βπͺ¨ βπ΅ βπ§ ππ βπ§ β¬π« βπ» β¬π βπ§ β¬π« βπ¬ βποΈ ββ πΈπ β¬π βπ΅ π΅π ββ βπ§ β¬π β¬π« β¬π β¬β βπ΅ βπ― βπ» βποΈ ππΏ πβ‘ βπ° πβ‘ πΈβ·οΈ β¬π ββ ππ΅ βπ§ π΅πΌ, πΈβ·οΈ ππ ππ πΈβ·οΈ π΅πΌ, βπ» βπ― β¬π« πΈπ πΈπ₯ ππ βποΈ ππ βποΈ βπ΅ π΅π― βποΈ πΈπ πΈβ·οΈ πππͺοΈ π΅π πΈπ π𧬠βπ΅ βπ¬ πΈπ ππΏ π΅πΌ, βπ§ βπ― βπͺ¨ βποΈ π𧬠πΈπ πΈπ§ πΈπ₯ βπͺ¨ π΅π πΈβ·οΈ ββ°οΈ βποΈ πΈπ₯ βπͺ βποΈ ππΏ π𧬠ππΏ βπ― ββ°οΈ β¬π« ππ βπ βπ΅ ππ β¬π« πππͺοΈ ππ βπ π΅π― βποΈ ππΏ βπ βποΈ π𧬠β¬π βπ¬ βπ» πΈπ πΈβ·οΈ ππΏ πβ‘ βπ π΅πΌ, βπ» βπ» π΅π πΈβ·οΈ π΅πΌ, βπ§ β¬β π΅π π𧬠ββ ββ ββ πΈβ·οΈ ππ βποΈ βπ§ πΈπ ββ°οΈ βποΈ π΅π― πΈπ βποΈ πβ‘ π΅πΌ, ββ βπͺ πΈβ·οΈ ππ ππ βπ§ βπ πππͺοΈ π΅π₯ βπ
Gene Report
π¬ RPLC_GENE
Function: π΅ HARMONIC TUNER (Frequency Coordination)
Total Codons: 210, Functional: 210
Pattern Distribution:
Pattern 3 (Structural (Simple)): 13 (6.2%)
Pattern 5 (Flow (Bonding)): 33 (15.7%)
Pattern 20 (Complex (Coordination)): 82 (39.0%)
Pattern 201 (Spiral Threaders (ΟΒΉ Harmonics)): 16 (7.6%)
Pattern 202 (Pentagon Ricochets (ΟΒ² Harmonics)): 21 (10.0%)
Pattern 203 (Fibonacci Pilers (ΟΒ³ Harmonics)): 10 (4.8%)
Pattern 204 (Golden Harmonic Resonators (Οβ΄ Harmonics)): 19 (9.0%)
Pattern 205 (Geometric Controllers (Οβ Harmonics)): 16 (7.6%)
Junk 66 (DNA's Highway - navigating, timing, scaling, control): 0 (0.0%)
Flow/Structure Ratio: 2.54 - βοΈ Moderate flow structure balance
Folding Strategy: π COMPLEX FOLDING (Multi-domain coordination)
Bonding Sites: 184
Early bonds: 60 (avg distance: 55.0)
Middle bonds: 93 (avg distance: 53.3)
Late bonds: 31 (avg distance: 19.8)
π Protein Folding - Bond/Coordination Candidates:
π’ @1 (20+5 :ATG) πͺ 45 β To @(20+8 TAC) <> π΄ High Energy Collision 11 β To @(20+5 ATG)
π· @3 (20+25 :GGT) πͺ 23 β To @(203+4 CCA) <> π΄ High Energy Collision 6, 10, 53, 78, 93 β To @(20+25 GGT)
π’ @5 (5+6 :GTC) βπͺ Flow Figure8 + Opposites36, 49, 80(-1), 94(-3) β To @(203+2, 5+5 CAG, TGG)
π· @6 (20+25 :GGT) πͺ 23 β To @(203+4 CCA) <> π΄ High Energy Collision 3, 10, 53, 78, 93 β To @(20+25 GGT)
π’ @9 (20+23 :GTG) πͺ 67 β To @(20+13 CAC) <> π΄ High Energy Collision 50, 60 β To @(20+23 GTG)
π· @10 (20+25 :GGT) πͺ 23 β To @(203+4 CCA) <> π΄ High Energy Collision 3, 6, 53, 78, 93 β To @(20+25 GGT)
π’ @11 (20+5 :ATG) πͺ 45(-1) β To @(20+8 TAC) <> π΄ High Energy Collision 1 β To @(20+5 ATG)
π· @13 (20+16 :CGT) πͺ 31 β To @(204+2 GCA) <> π΄ High Energy Collision 46, 59, 77 β To @(20+16 CGT)
π’ @15 (3+7 :TTC) πͺπ Opposites + Structural Lock Key62, 63(-1) β To @(201+1, 3+8 AAG, CCT) <> π΄ High Energy Collision 68, 82, 90 β To @(3+7 TTC)
π· @18 (204+1 :GAC) πͺ 40(-4), 79(-1), 84(-3), 100(-2) β To @(20+1 CTG) <> π΄π‘βοΈ βοΈ High Energy Collision + Medium Energy Guidance + Unknown Coordination 204+1 205+1 + Unknown Coordination 205+1 204+1 7, 8, 33, 38, 39...,106, 108, 114, 116 β To @(204+1, 204+5, 205+1 AAA, CGC, GAC)
π· @23 (203+4 :CCA) πͺ 3, 6, 10, 53(-1), 78, 93(-2), 115, 117, 120(-1) β To @(20+25 GGT)
π· @31 (204+2 :GCA) πͺ 13, 46, 59(-2), 77, 128(-1) β To @(20+16 CGT) <> π΄ High Energy Collision 119 β To @(204+2 GCA)
π’ @36 (203+2 :CAG) πͺ 5 β To @(5+6 GTC) <> π΄ High Energy Collision 49, 94, 130 β To @(203+2 CAG)
π° @39 (204+1 :GAC) πͺ 40, 79(-2), 84(-5), 100(-2) β To @(20+1 CTG) <> π΄π‘βοΈ βοΈ High Energy Collision + Medium Energy Guidance + Unknown Coordination 204+1 205+1 + Unknown Coordination 205+1 204+1 7, 8, 18, 33, 38...,114, 116, 124, 131 β To @(204+1, 204+5, 205+1 AAA, CGC, GAC)
π° @40 (20+1 :CTG) πͺ 18(-4), 39, 103(-5), 108(-5), 131(-6) β To @(204+1 GAC) <> π΄ High Energy Collision 79, 84, 100 β To @(20+1 CTG)
π’ @42 (201+2 :AAC) πͺ 138(-2) β To @(5+3 TTG) <> π΄ High Energy Collision 32, 58, 126, 136 β To @(201+2 AAC)
π’ @44 (202+5 :GGC) πͺ 143 β To @(20+14 CCG) <> π΄ High Energy Collision 19, 66, 72, 76, 87, 111 β To @(202+5 GGC)
π’ @45 (20+8 :TAC) πͺ 1, 11(-1) β To @(20+5 ATG)
π· @46 (20+16 :CGT) πͺ 31, 119 β To @(204+2 GCA) <> π΄ High Energy Collision 13, 59, 77, 128 β To @(20+16 CGT)
π’ @49 (203+2 :CAG) πͺ 5 β To @(5+6 GTC) <> π΄ High Energy Collision 36, 94, 130, 148 β To @(203+2 CAG)
π· @50 (20+23 :GTG) πͺ 67, 134, 140(3) β To @(20+13 CAC) <> π΄ High Energy Collision 9, 60 β To @(20+23 GTG)
π’ @51 (5+8 :ACC) β 137(2) β To @(5+7 TCC) <> π΄ High Energy Collision 12, 25, 52, 61, 112, 121, 129 β To @(5+8 ACC)
π’ @52 (5+8 :ACC) β 137 β To @(5+7 TCC) <> π΄ High Energy Collision 12, 25, 51, 61, 112, 121, 129 β To @(5+8 ACC)
π’ @53 (20+25 :GGT) πͺ 23(-1) β To @(203+4 CCA) <> π΄ High Energy Collision 3, 6, 10, 78, 93...,120, 135, 144, 147 β To @(20+25 GGT)
π’ @58 (201+2 :AAC) πͺ 138 β To @(5+3 TTG) <> π΄ High Energy Collision 32, 42, 126, 136, 149 β To @(201+2 AAC)
π· @59 (20+16 :CGT) πͺ 31(-2), 119 β To @(204+2 GCA) <> π΄ High Energy Collision 13, 46, 77, 128 β To @(20+16 CGT)
π° @60 (20+23 :GTG) πͺ 67(3), 134, 140(4) β To @(20+13 CAC) <> π΄ High Energy Collision 9, 50, 155 β To @(20+23 GTG)
π’ @61 (5+8 :ACC) β 137(4) β To @(5+7 TCC) <> π΄ High Energy Collision 12, 25, 51, 52, 112, 121, 129 β To @(5+8 ACC)
π° @62 (201+1 :AAG) πͺ 15, 68(3), 82(-1), 90(-1), 118(2), 127(-1), 156(-1) β To @(3+7 TTC) <> π΄ High Energy Collision 123, 159 β To @(201+1 AAG)
π° @63 (3+8 :CCT) π 15(-1), 68(1), 82(-2), 90(-3), 118, 127, 156 β To @(3+7 TTC)
π’ @66 (202+5 :GGC) πͺ 143, 152(-2) β To @(20+14 CCG) <> π΄ High Energy Collision 19, 44, 72, 76, 87, 111, 153, 158 β To @(202+5 GGC)
π° @67 (20+13 :CAC) πͺ 9, 50, 60(3), 155(-1) β To @(20+23 GTG) <> π΄ High Energy Collision 134, 140 β To @(20+13 CAC)
π° @68 (3+7 :TTC) πͺπ Opposites + Structural Lock Key62(3), 63(1), 123, 159(-2) β To @(201+1, 3+8 AAG, CCT) <> π΄ High Energy Collision 15, 82, 90, 118, 127, 156 β To @(3+7 TTC)
π’ @72 (202+5 :GGC) πͺ 143, 152(-2) β To @(20+14 CCG) <> π΄ High Energy Collision 19, 44, 66, 76, 87, 111, 153, 158 β To @(202+5 GGC)
π’ @76 (202+5 :GGC) πͺ 143(-1), 152(-2) β To @(20+14 CCG) <> π΄ High Energy Collision 19, 44, 66, 72, 87, 111, 153, 158 β To @(202+5 GGC)
π’ @77 (20+16 :CGT) πͺ 31, 119(-3), 162(-2) β To @(204+2 GCA) <> π΄ High Energy Collision 13, 46, 59, 128, 169 β To @(20+16 CGT)
π’ @78 (20+25 :GGT) πͺ 23 β To @(203+4 CCA) <> π΄ High Energy Collision 3, 6, 10, 53, 93...,144, 147, 163, 166 β To @(20+25 GGT)
π· @79 (20+1 :CTG) πͺ 18(-1), 39(-2), 103, 108, 131, 176 β To @(204+1 GAC) <> π΄ High Energy Collision 40, 84, 100 β To @(20+1 CTG)
π’ @80 (5+5 :TGG) β 5(-1) β To @(5+6 GTC) <> π΄ High Energy Collision 125 β To @(5+5 TGG)
π· @82 (3+7 :TTC) πͺπ Opposites + Structural Lock Key62(-1), 63(-2), 123(-2), 159 β To @(201+1, 3+8 AAG, CCT) <> π΄ High Energy Collision 15, 68, 90, 118, 127, 156 β To @(3+7 TTC)
π· @84 (20+1 :CTG) πͺ 18(-3), 39(-5), 103(-4), 108(-2), 131(-4), 176(-2), 181(-5) β To @(204+1 GAC) <> π΄ High Energy Collision 40, 79, 100 β To @(20+1 CTG)
π’ @87 (202+5 :GGC) πͺ 143, 152(-2) β To @(20+14 CCG) <> π΄ High Energy Collision 19, 44, 66, 72, 76, 111, 153, 158 β To @(202+5 GGC)
π· @90 (3+7 :TTC) πͺπ Opposites + Structural Lock Key62(-1), 63(-3), 123, 159 β To @(201+1, 3+8 AAG, CCT) <> π΄ High Energy Collision 15, 68, 82, 118, 127, 156 β To @(3+7 TTC)
π’ @93 (20+25 :GGT) πͺ 23(-2) β To @(203+4 CCA) <> π΄ High Energy Collision 3, 6, 10, 53, 78...,147, 163, 166, 191 β To @(20+25 GGT)
π’ @94 (203+2 :CAG) πͺ 5(-3), 193(-1) β To @(5+6 GTC) <> π΄ High Energy Collision 36, 49, 130, 148, 150, 164, 173 β To @(203+2 CAG)
π’ @98 (5+4 :GTT) β 138 β To @(5+3 TTG) <> π΄ High Energy Collision 20, 29, 34, 37, 104...,142, 172, 180, 189 β To @(5+4 GTT)
π° @100 (20+1 :CTG) πͺ 18(-2), 39(-2), 103(-1), 108(-1), 131(-1), 176, 181(-3) β To @(204+1 GAC) <> π΄ High Energy Collision 40, 79, 84, 186, 187, 188 β To @(20+1 CTG)
π° @103 (204+1 :GAC) πͺ 40(-5), 79, 84(-4), 100(-1), 186(-2), 187(-1), 188(-4), 201(-4) β To @(20+1 CTG) <> π΄π‘βοΈ βοΈ High Energy Collision + Medium Energy Guidance + Unknown Coordination 204+1 205+1 + Unknown Coordination 205+1 204+1 7, 8, 18, 33, 38...,181, 184, 190, 200 β To @(204+1, 204+5, 205+1 AAA, CGC, GAC)
π’ @104 (5+4 :GTT) β 138 β To @(5+3 TTG) <> π΄ High Energy Collision 20, 29, 34, 37, 98...,172, 180, 189, 203 β To @(5+4 GTT)
π’ @107 (5+4 :GTT) β 138 β To @(5+3 TTG) <> π΄ High Energy Collision 20, 29, 34, 37, 98...,172, 180, 189, 203 β To @(5+4 GTT)
π° @108 (204+1 :GAC) πͺ 40(-5), 79, 84(-2), 100(-1), 186(-2), 187(-1), 188(-4), 201(-4) β To @(20+1 CTG) <> π΄π‘βοΈ βοΈ High Energy Collision + Medium Energy Guidance + Unknown Coordination 204+1 205+1 + Unknown Coordination 205+1 204+1 18, 33, 38, 39, 55...,184, 190, 200, 204 β To @(204+1, 204+5, 205+1 AAA, CGC, GAC)
π’ @111 (202+5 :GGC) πͺ 143, 152(-4), 194 β To @(20+14 CCG) <> π΄ High Energy Collision 19, 44, 66, 72, 76, 87, 153, 158 β To @(202+5 GGC)
π· @112 (5+8 :ACC) β 137(-1) β To @(5+7 TCC) <> π΄ High Energy Collision 25, 51, 52, 61, 121, 129, 171, 197 β To @(5+8 ACC)
π’ @115 (20+25 :GGT) πͺ 23, 205(-4) β To @(203+4 CCA) <> π΄ High Energy Collision 53, 78, 93, 117, 120...,166, 191, 195, 198 β To @(20+25 GGT)
π’ @117 (20+25 :GGT) πͺ 23, 205(-2) β To @(203+4 CCA) <> π΄ High Energy Collision 53, 78, 93, 115, 120...,166, 191, 195, 198 β To @(20+25 GGT)
π° @118 (3+7 :TTC) πͺπ Opposites + Structural Lock Key62(2), 63, 123, 159(-1), 208(3) β To @(201+1, 3+8 AAG, CCT) <> π΄ High Energy Collision 68, 82, 90, 127, 156 β To @(3+7 TTC)
π° @119 (204+2 :GCA) πͺ 46, 59, 77(-3), 128(-3), 169 β To @(20+16 CGT) <> π΄ High Energy Collision 31, 162, 196 β To @(204+2 GCA)
π’ @120 (20+25 :GGT) πͺ 23(-1), 205 β To @(203+4 CCA) <> π΄ High Energy Collision 53, 78, 93, 115, 117...,166, 191, 195, 198 β To @(20+25 GGT)
π· @121 (5+8 :ACC) β 137(3) β To @(5+7 TCC) <> π΄ High Energy Collision 25, 51, 52, 61, 112, 129, 171, 197 β To @(5+8 ACC)
π· @122 (5+4 :GTT) β 138(4) β To @(5+3 TTG) <> π΄ High Energy Collision 29, 34, 37, 98, 104...,172, 180, 189, 203 β To @(5+4 GTT)
π° @123 (201+1 :AAG) πͺ 68, 82(-2), 90, 118, 127, 156 β To @(3+7 TTC) <> π΄ High Energy Collision 62, 159, 208 β To @(201+1 AAG)
π’ @124 (204+5 :CGC) πͺ 209(-2) β To @(204+3 GCG) <> π΄π‘ High Energy Collision + Medium Energy Guidance 33, 39, 83, 103, 108...,179, 181, 184, 200 β To @(204+1, 204+5 CGC, GAC)
π’ @125 (5+5 :TGG) β 193 β To @(5+6 GTC) <> π΄ High Energy Collision 80 β To @(5+5 TGG)
π· @126 (201+2 :AAC) πͺ 138(-2) β To @(5+3 TTG) <> π΄ High Energy Collision 32, 42, 58, 136, 149, 167, 185 β To @(201+2 AAC)
π° @127 (3+7 :TTC) πͺπ Opposites + Structural Lock Key62(-1), 63, 123, 159, 208(2) β To @(201+1, 3+8 AAG, CCT) <> π΄ High Energy Collision 68, 82, 90, 118, 156 β To @(3+7 TTC)
π° @128 (20+16 :CGT) πͺ 31(-1), 119(-3), 162(2), 196(-1) β To @(204+2 GCA) <> π΄ High Energy Collision 46, 59, 77, 169 β To @(20+16 CGT)
π° @129 (5+8 :ACC) β 137(2) β To @(5+7 TCC) <> π΄ High Energy Collision 51, 52, 61, 112, 121, 171, 197 β To @(5+8 ACC)
π’ @130 (203+2 :CAG) πͺ 193(-1) β To @(5+6 GTC) <> π΄ High Energy Collision 36, 49, 94, 148, 150, 164, 173 β To @(203+2 CAG)
π’ @131 (204+1 :GAC) πͺ 40(-6), 79, 84(-4), 100(-1), 186(-2), 187, 188(-2), 201(-2) β To @(20+1 CTG) <> π΄π‘βοΈ βοΈ High Energy Collision + Medium Energy Guidance + Unknown Coordination 204+1 205+1 + Unknown Coordination 205+1 204+1 33, 38, 39, 55, 56...,184, 190, 200, 204 β To @(204+1, 204+5, 205+1 AAA, CGC, GAC)
π· @134 (20+13 :CAC) πͺ 50, 60, 155, 207(2) β To @(20+23 GTG) <> π΄ High Energy Collision 67, 140 β To @(20+13 CAC)
π’ @135 (20+25 :GGT) πͺ 205(3) β To @(203+4 CCA) <> π΄ High Energy Collision 53, 78, 93, 115, 117...,166, 191, 195, 198 β To @(20+25 GGT)
π° @136 (201+2 :AAC) πͺ 138(2) β To @(5+3 TTG) <> π΄ High Energy Collision 42, 58, 126, 149, 167, 185 β To @(201+2 AAC)
π° @137 (5+7 :TCC) β 51(2), 52, 61(4), 112(-1), 121(3), 129(2), 171(4), 197(-1) β To @(5+8 ACC)
π° @138 (5+3 :TTG) βπͺ Flow Figure8 + Opposites42(-2), 58, 98, 104, 107, 122(4), 126(-2), 136(2), 142, 149(-2), 167(-2), 172(4), 180, 185(-2), 189, 203(1) β To @(201+2, 5+4 AAC, GTT)
π· @140 (20+13 :CAC) πͺ 50(3), 60(4), 155, 207(3) β To @(20+23 GTG) <> π΄ High Energy Collision 67, 134 β To @(20+13 CAC)
π’ @141 (204+5 :CGC) πͺ 209(3) β To @(204+3 GCG) <> π΄π‘ High Energy Collision + Medium Energy Guidance 83, 103, 108, 124, 131, 176, 179, 181, 184, 200 β To @(204+1, 204+5 CGC, GAC)
π° @142 (5+4 :GTT) β 138 β To @(5+3 TTG) <> π΄ High Energy Collision 98, 104, 107, 122, 172, 180, 189, 203 β To @(5+4 GTT)
π· @143 (20+14 :CCG) πͺ 44, 66, 72, 76(-1), 87, 111, 153(-1), 158 β To @(202+5 GGC) <> π΄ High Energy Collision 152, 194 β To @(20+14 CCG)
π’ @144 (20+25 :GGT) πͺ 205 β To @(203+4 CCA) <> π΄ High Energy Collision 53, 78, 93, 115, 117...,166, 191, 195, 198 β To @(20+25 GGT)
π’ @147 (20+25 :GGT) πͺ 205 β To @(203+4 CCA) <> π΄ High Energy Collision 53, 78, 93, 115, 117...,166, 191, 195, 198 β To @(20+25 GGT)
π’ @148 (203+2 :CAG) πͺ 193(-2) β To @(5+6 GTC) <> π΄ High Energy Collision 49, 94, 130, 150, 164, 173 β To @(203+2 CAG)
π· @149 (201+2 :AAC) πͺ 138(-2) β To @(5+3 TTG) <> π΄ High Energy Collision 58, 126, 136, 167, 185 β To @(201+2 AAC)
π’ @150 (203+2 :CAG) πͺ 193(-1) β To @(5+6 GTC) <> π΄ High Energy Collision 94, 130, 148, 164, 173 β To @(203+2 CAG)
π° @152 (20+14 :CCG) πͺ 66(-2), 72(-2), 76(-2), 87(-2), 111(-4), 153(4), 158(-3) β To @(202+5 GGC) <> π΄ High Energy Collision 143, 194 β To @(20+14 CCG)
π° @153 (202+5 :GGC) πͺ 143(-1), 152(4), 194 β To @(20+14 CCG) <> π΄ High Energy Collision 66, 72, 76, 87, 111, 158 β To @(202+5 GGC)
π· @155 (20+23 :GTG) πͺ 67(-1), 134, 140 β To @(20+13 CAC) <> π΄ High Energy Collision 60, 207 β To @(20+23 GTG)
π° @156 (3+7 :TTC) πͺπ Opposites + Structural Lock Key62(-1), 63, 123, 159(-3), 208(-2) β To @(201+1, 3+8 AAG, CCT) <> π΄ High Energy Collision 68, 82, 90, 118, 127 β To @(3+7 TTC)
π° @158 (202+5 :GGC) πͺ 143, 152(-3), 194 β To @(20+14 CCG) <> π΄ High Energy Collision 66, 72, 76, 87, 111, 153 β To @(202+5 GGC)
π° @159 (201+1 :AAG) πͺ 68(-2), 82, 90, 118(-1), 127, 156(-3) β To @(3+7 TTC) <> π΄ High Energy Collision 62, 123, 208 β To @(201+1 AAG)
π° @162 (204+2 :GCA) πͺ 77(-2), 128(2), 169 β To @(20+16 CGT) <> π΄ High Energy Collision 119, 196 β To @(204+2 GCA)
π’ @163 (20+25 :GGT) πͺ 205 β To @(203+4 CCA) <> π΄ High Energy Collision 78, 93, 115, 117, 120...,166, 191, 195, 198 β To @(20+25 GGT)
π· @164 (203+2 :CAG) πͺ 193(-2) β To @(5+6 GTC) <> π΄ High Energy Collision 94, 130, 148, 150, 173 β To @(203+2 CAG)
π’ @166 (20+25 :GGT) πͺ 205 β To @(203+4 CCA) <> π΄ High Energy Collision 78, 93, 115, 117, 120...,163, 191, 195, 198 β To @(20+25 GGT)
π· @167 (201+2 :AAC) πͺ 138(-2) β To @(5+3 TTG) <> π΄ High Energy Collision 126, 136, 149, 185 β To @(201+2 AAC)
π° @169 (20+16 :CGT) πͺ 119, 162, 196(-1) β To @(204+2 GCA) <> π΄ High Energy Collision 77, 128 β To @(20+16 CGT)
π’ @171 (5+8 :ACC) β 137(4) β To @(5+7 TCC) <> π΄ High Energy Collision 112, 121, 129, 197 β To @(5+8 ACC)
π’ @172 (5+4 :GTT) β 138(4) β To @(5+3 TTG) <> π΄ High Energy Collision 98, 104, 107, 122, 142, 180, 189, 203 β To @(5+4 GTT)
π· @173 (203+2 :CAG) πͺ 193 β To @(5+6 GTC) <> π΄ High Energy Collision 94, 130, 148, 150, 164 β To @(203+2 CAG)
π· @176 (204+1 :GAC) πͺ 79, 84(-2), 100, 186(-2), 187, 188(-2), 201(-2) β To @(20+1 CTG) <> π΄π‘βοΈ βοΈ High Energy Collision + Medium Energy Guidance + Unknown Coordination 204+1 205+1 + Unknown Coordination 205+1 204+1 83, 103, 105, 106, 108...,184, 190, 200, 204 β To @(204+1, 204+5, 205+1 AAA, CGC, GAC)
π’ @179 (204+5 :CGC) πͺ 209 β To @(204+3 GCG) <> π΄π‘ High Energy Collision + Medium Energy Guidance 83, 103, 108, 124, 131, 141, 176, 181, 184, 200 β To @(204+1, 204+5 CGC, GAC)
π’ @180 (5+4 :GTT) β 138 β To @(5+3 TTG) <> π΄ High Energy Collision 98, 104, 107, 122, 142, 172, 189, 203 β To @(5+4 GTT)
π° @181 (204+1 :GAC) πͺ 84(-5), 100(-3), 186(-2), 187(-1), 188(-4), 201(-4) β To @(20+1 CTG) <> π΄π‘βοΈ βοΈ High Energy Collision + Medium Energy Guidance + Unknown Coordination 204+1 205+1 + Unknown Coordination 205+1 204+1 83, 103, 105, 106, 108...,184, 190, 200, 204 β To @(204+1, 204+5, 205+1 AAA, CGC, GAC)
π· @184 (204+5 :CGC) πͺ 209 β To @(204+3 GCG) <> π΄π‘ High Energy Collision + Medium Energy Guidance 103, 108, 124, 131, 141, 176, 179, 181, 200 β To @(204+1, 204+5 CGC, GAC)
π’ @185 (201+2 :AAC) πͺ 138(-2) β To @(5+3 TTG) <> π΄ High Energy Collision 126, 136, 149, 167 β To @(201+2 AAC)
π° @186 (20+1 :CTG) πͺ 103(-2), 108(-2), 131(-2), 176(-2), 181(-2), 200(-7) β To @(204+1 GAC) <> π΄ High Energy Collision 100, 187, 188, 201 β To @(20+1 CTG)
π° @187 (20+1 :CTG) πͺ 103(-1), 108(-1), 131, 176, 181(-1), 200(-6) β To @(204+1 GAC) <> π΄ High Energy Collision 100, 186, 188, 201 β To @(20+1 CTG)
π° @188 (20+1 :CTG) πͺ 103(-4), 108(-4), 131(-2), 176(-2), 181(-4), 200(-7) β To @(204+1 GAC) <> π΄ High Energy Collision 100, 186, 187, 201 β To @(20+1 CTG)
π’ @189 (5+4 :GTT) β 138 β To @(5+3 TTG) <> π΄ High Energy Collision 98, 104, 107, 122, 142, 172, 180, 203 β To @(5+4 GTT)
π· @191 (20+25 :GGT) πͺ 205(-4) β To @(203+4 CCA) <> π΄ High Energy Collision 93, 115, 117, 120, 135...,163, 166, 195, 198 β To @(20+25 GGT)
π· @193 (5+6 :GTC) βπͺ Flow Figure8 + Opposites94(-1), 125, 130(-1), 148(-2), 150(-1), 164(-2), 173 β To @(203+2, 5+5 CAG, TGG)
π’ @194 (20+14 :CCG) πͺ 111, 153, 158 β To @(202+5 GGC) <> π΄ High Energy Collision 143, 152 β To @(20+14 CCG)
π· @195 (20+25 :GGT) πͺ 205 β To @(203+4 CCA) <> π΄ High Energy Collision 115, 117, 120, 135, 144, 147, 163, 166, 191, 198 β To @(20+25 GGT)
π· @196 (204+2 :GCA) πͺ 128(-1), 169(-1) β To @(20+16 CGT) <> π΄ High Energy Collision 119, 162 β To @(204+2 GCA)
π’ @197 (5+8 :ACC) β 137(-1) β To @(5+7 TCC) <> π΄ High Energy Collision 112, 121, 129, 171 β To @(5+8 ACC)
π° @198 (20+25 :GGT) πͺ 205(-1) β To @(203+4 CCA) <> π΄ High Energy Collision 115, 117, 120, 135, 144, 147, 163, 166, 191, 195 β To @(20+25 GGT)
π° @200 (204+1 :GAC) πͺ 186(-7), 187(-6), 188(-7), 201(4) β To @(20+1 CTG) <> π΄π‘βοΈ βοΈ High Energy Collision + Medium Energy Guidance + Unknown Coordination 204+1 205+1 + Unknown Coordination 205+1 204+1 103, 105, 106, 108, 114...,181, 184, 190, 204 β To @(204+1, 204+5, 205+1 AAA, CGC, GAC)
π° @201 (20+1 :CTG) πͺ 103(-4), 108(-4), 131(-2), 176(-2), 181(-4), 200(4) β To @(204+1 GAC) <> π΄ High Energy Collision 186, 187, 188 β To @(20+1 CTG)
π’ @203 (5+4 :GTT) β 138(1) β To @(5+3 TTG) <> π΄ High Energy Collision 104, 107, 122, 142, 172, 180, 189 β To @(5+4 GTT)
π° @205 (203+4 :CCA) πͺ 115(-4), 117(-2), 120, 135(3), 144, 147, 163, 166, 191(-4), 195, 198(-1) β To @(20+25 GGT)
π’ @207 (20+23 :GTG) πͺ 134(2), 140(3) β To @(20+13 CAC) <> π΄ High Energy Collision 155 β To @(20+23 GTG)
π’ @208 (201+1 :AAG) πͺ 118(3), 127(2), 156(-2) β To @(3+7 TTC) <> π΄ High Energy Collision 123, 159 β To @(201+1 AAG)
π· @209 (204+3 :GCG) πͺ 124(-2), 141(3), 179, 184 β To @(204+5 CGC)
π Inter-Protein Assembly Analysis:
Partners analyzed: 3
Assembly prediction: Tight Assembly
π Inter-Protein Candidates:
π’ @1 (20+5:ATG) πͺ Opposites β rpsD_gene@75, 76, 103, 204 20+8:TAC <> π΄ High Energy Collision 1, 105, 124, 178 20+5:ATG
π’ @3 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @4 (3+1:TTA) π Structural Lock Key β rpsD_gene@140 3+2:AAT <> π΄ High Energy Collision 19 3+1:TTA
π’ @5 (5+6:GTC) βπͺ Flow Figure8 + Opposites β rpsD_gene@40, 54, 71, 116, 136, 152, 164, 170 203+2,5+5:CAG,TGG <> π΄ High Energy Collision 201 5+6:GTC
π’ @6 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @9 (20+23:GTG) πͺ Opposites β rpsD_gene@41, 198 20+13:CAC <> π΄ High Energy Collision 53, 67, 155 20+23:GTG
π’ @10 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @11 (20+5:ATG) πͺ Opposites β rpsD_gene@75, 76, 103, 204 20+8:TAC <> π΄ High Energy Collision 1, 105, 124, 178 20+5:ATG
π’ @12 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π· @13 (20+16:CGT) πͺ Opposites β rpsD_gene@2, 79, 80, 112, 114, 122 204+2:GCA <> π΄ High Energy Collision 13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT
π° @15 (3+7:TTC) πͺπ Opposites + Structural Lock Key β rpsD_gene@7, 8, 10, 22, 31...,177, 183, 185, 206 201+1,3+8:AAG,CCT <> π΄ High Energy Collision 20, 72, 107 3+7:TTC
π· @16 (20+19:ACA) πͺ Opposites β rpsD_gene@32 5+2:TGT <> Opposites :
π° @18 (204+1:GAC) πͺ Opposites β rpsD_gene@11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG <> π΄π‘βοΈ Opposites 18, 26, 33, 45, 50...,148, 154, 156, 194 204+1,204+5,205+1:AAA,CGC,GAC
π· @19 (202+5:GGC) πͺ Opposites β rpsD_gene@46, 139, 186 20+14:CCG <> π΄ High Energy Collision 16, 24, 39, 84, 106, 176 202+5:GGC
π· @20 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π· @21 (5+1:TCT) βπͺ Flow Figure8 + Opposites β rpsD_gene@3, 32 201+3,5+2:AGA,TGT <> π΄ High Energy Collision 23, 49, 134, 153, 189, 192 5+1:TCT
π· @23 (203+4:CCA) πͺ Opposites β rpsD_gene@6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT <> π΄ High Energy Collision 168 203+4:CCA
π’ @24 (20+22:GTA) πͺ Opposites β rpsD_gene@120 20+2:CAT <> π΄ High Energy Collision 102, 125, 143 20+22:GTA
π’ @25 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π’ @26 (20+22:GTA) πͺ Opposites β rpsD_gene@120 20+2:CAT <> π΄ High Energy Collision 102, 125, 143 20+22:GTA
π° @29 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π· @31 (204+2:GCA) πͺ Opposites β rpsD_gene@13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT <> π΄ High Energy Collision 2, 79, 80, 112, 114, 122 204+2:GCA
π· @32 (201+2:AAC) πͺ Opposites β rpsD_gene@5, 55, 91 5+3:TTG <> π΄ High Energy Collision 74, 85, 89, 100, 126, 131, 196 201+2:AAC
π° @33 (204+5:CGC) πͺ Opposites β rpsD_gene@27, 43, 149, 193 204+3:GCG <> π΄π‘ Opposites 18, 26, 50, 62, 99, 141, 154, 194 204+1,204+5:CGC,GAC
π° @34 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π’ @36 (203+2:CAG) πͺ Opposites β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 40, 54, 71, 116, 136, 152, 164 203+2:CAG
π° @37 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π° @39 (204+1:GAC) πͺ Opposites β rpsD_gene@11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG <> π΄π‘βοΈ Opposites 18, 26, 33, 45, 50...,148, 154, 156, 194 204+1,204+5,205+1:AAA,CGC,GAC
π· @40 (20+1:CTG) πͺ Opposites β rpsD_gene@18, 50, 99, 141, 194 204+1:GAC <> π΄ High Energy Collision 11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG
π· @42 (201+2:AAC) πͺ Opposites β rpsD_gene@5, 55, 91 5+3:TTG <> π΄ High Energy Collision 74, 85, 89, 100, 126, 131, 196 201+2:AAC
π° @44 (202+5:GGC) πͺ Opposites β rpsD_gene@46, 139, 186 20+14:CCG <> π΄ High Energy Collision 16, 24, 39, 84, 106, 176 202+5:GGC
π’ @45 (20+8:TAC) πͺ Opposites β rpsD_gene@1, 105, 124, 178 20+5:ATG <> π΄ High Energy Collision 75, 76, 103, 204 20+8:TAC
π’ @46 (20+16:CGT) πͺ Opposites β rpsD_gene@2, 79, 80, 112, 114, 122 204+2:GCA <> π΄ High Energy Collision 13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT
π’ @49 (203+2:CAG) πͺ Opposites β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 40, 54, 71, 116, 136, 152, 164 203+2:CAG
π° @50 (20+23:GTG) πͺ Opposites β rpsD_gene@41, 198 20+13:CAC <> π΄ High Energy Collision 53, 67, 155 20+23:GTG
π’ @51 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π’ @52 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π’ @53 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π° @58 (201+2:AAC) πͺ Opposites β rpsD_gene@5, 55, 91 5+3:TTG <> π΄ High Energy Collision 74, 85, 89, 100, 126, 131, 196 201+2:AAC
π· @59 (20+16:CGT) πͺ Opposites β rpsD_gene@2, 79, 80, 112, 114, 122 204+2:GCA <> π΄ High Energy Collision 13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT
π· @60 (20+23:GTG) πͺ Opposites β rpsD_gene@41, 198 20+13:CAC <> π΄ High Energy Collision 53, 67, 155 20+23:GTG
π’ @61 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π· @62 (201+1:AAG) πͺ Opposites β rpsD_gene@20, 72, 107 3+7:TTC <> π΄ High Energy Collision 8, 10, 22, 31, 58...,177, 183, 185, 206 201+1:AAG
π° @63 (3+8:CCT) π Structural Lock Key β rpsD_gene@20, 72, 107 3+7:TTC <> π΄ High Energy Collision 7, 38 3+8:CCT
π· @66 (202+5:GGC) πͺ Opposites β rpsD_gene@46, 139, 186 20+14:CCG <> π΄ High Energy Collision 16, 24, 39, 84, 106, 176 202+5:GGC
π° @67 (20+13:CAC) πͺ Opposites β rpsD_gene@53, 67, 155 20+23:GTG <> π΄ High Energy Collision 41, 198 20+13:CAC
π· @68 (3+7:TTC) πͺπ Opposites + Structural Lock Key β rpsD_gene@7, 8, 10, 22, 31...,177, 183, 185, 206 201+1,3+8:AAG,CCT <> π΄ High Energy Collision 20, 72, 107 3+7:TTC
π· @72 (202+5:GGC) πͺ Opposites β rpsD_gene@46, 139, 186 20+14:CCG <> π΄ High Energy Collision 16, 24, 39, 84, 106, 176 202+5:GGC
π’ @73 (20+22:GTA) πͺ Opposites β rpsD_gene@120 20+2:CAT <> π΄ High Energy Collision 102, 125, 143 20+22:GTA
π’ @76 (202+5:GGC) πͺ Opposites β rpsD_gene@46, 139, 186 20+14:CCG <> π΄ High Energy Collision 16, 24, 39, 84, 106, 176 202+5:GGC
π° @77 (20+16:CGT) πͺ Opposites β rpsD_gene@2, 79, 80, 112, 114, 122 204+2:GCA <> π΄ High Energy Collision 13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT
π’ @78 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π· @79 (20+1:CTG) πͺ Opposites β rpsD_gene@18, 50, 99, 141, 194 204+1:GAC <> π΄ High Energy Collision 11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG
π’ @80 (5+5:TGG) β Flow Figure8 β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 170 5+5:TGG
π· @82 (3+7:TTC) πͺπ Opposites + Structural Lock Key β rpsD_gene@7, 8, 10, 22, 31...,177, 183, 185, 206 201+1,3+8:AAG,CCT <> π΄ High Energy Collision 20, 72, 107 3+7:TTC
π’ @83 (204+5:CGC) πͺ Opposites β rpsD_gene@27, 43, 149, 193 204+3:GCG <> π΄π‘ Opposites 18, 26, 50, 62, 99, 141, 154, 194 204+1,204+5:CGC,GAC
π· @84 (20+1:CTG) πͺ Opposites β rpsD_gene@18, 50, 99, 141, 194 204+1:GAC <> π΄ High Energy Collision 11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG
π’ @87 (202+5:GGC) πͺ Opposites β rpsD_gene@46, 139, 186 20+14:CCG <> π΄ High Energy Collision 16, 24, 39, 84, 106, 176 202+5:GGC
π’ @89 (202+3:GAG) πͺ Opposites β rpsD_gene@9 20+15:CTC <> π΄ High Energy Collision 15, 35, 57, 69, 78...,179, 187, 197, 202 202+2,202+3:GAA,GAG
π’ @90 (3+7:TTC) πͺπ Opposites + Structural Lock Key β rpsD_gene@7, 8, 10, 22, 31...,177, 183, 185, 206 201+1,3+8:AAG,CCT <> π΄ High Energy Collision 20, 72, 107 3+7:TTC
π· @92 (20+22:GTA) πͺ Opposites β rpsD_gene@120 20+2:CAT <> π΄ High Energy Collision 102, 125, 143 20+22:GTA
π’ @93 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @94 (203+2:CAG) πͺ Opposites β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 40, 54, 71, 116, 136, 152, 164 203+2:CAG
π° @98 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π° @100 (20+1:CTG) πͺ Opposites β rpsD_gene@18, 50, 99, 141, 194 204+1:GAC <> π΄ High Energy Collision 11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG
π° @103 (204+1:GAC) πͺ Opposites β rpsD_gene@11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG <> π΄π‘βοΈ Opposites 18, 26, 33, 45, 50...,148, 154, 156, 194 204+1,204+5,205+1:AAA,CGC,GAC
π· @104 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π· @107 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π° @108 (204+1:GAC) πͺ Opposites β rpsD_gene@11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG <> π΄π‘βοΈ Opposites 18, 26, 33, 45, 50...,148, 154, 156, 194 204+1,204+5,205+1:AAA,CGC,GAC
π· @109 (20+22:GTA) πͺ Opposites β rpsD_gene@120 20+2:CAT <> π΄ High Energy Collision 102, 125, 143 20+22:GTA
π· @111 (202+5:GGC) πͺ Opposites β rpsD_gene@46, 139, 186 20+14:CCG <> π΄ High Energy Collision 16, 24, 39, 84, 106, 176 202+5:GGC
π’ @112 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π’ @113 (5+1:TCT) βπͺ Flow Figure8 + Opposites β rpsD_gene@3, 32 201+3,5+2:AGA,TGT <> π΄ High Energy Collision 23, 49, 134, 153, 189, 192 5+1:TCT
π’ @115 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @117 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @118 (3+7:TTC) πͺπ Opposites + Structural Lock Key β rpsD_gene@7, 8, 10, 22, 31...,177, 183, 185, 206 201+1,3+8:AAG,CCT <> π΄ High Energy Collision 20, 72, 107 3+7:TTC
π° @119 (204+2:GCA) πͺ Opposites β rpsD_gene@13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT <> π΄ High Energy Collision 2, 79, 80, 112, 114, 122 204+2:GCA
π’ @120 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @121 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π’ @122 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π· @123 (201+1:AAG) πͺ Opposites β rpsD_gene@20, 72, 107 3+7:TTC <> π΄ High Energy Collision 8, 10, 22, 31, 58...,177, 183, 185, 206 201+1:AAG
π· @124 (204+5:CGC) πͺ Opposites β rpsD_gene@27, 43, 149, 193 204+3:GCG <> π΄π‘ Opposites 18, 26, 50, 62, 99, 141, 154, 194 204+1,204+5:CGC,GAC
π’ @125 (5+5:TGG) β Flow Figure8 β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 170 5+5:TGG
π’ @126 (201+2:AAC) πͺ Opposites β rpsD_gene@5, 55, 91 5+3:TTG <> π΄ High Energy Collision 74, 85, 89, 100, 126, 131, 196 201+2:AAC
π· @127 (3+7:TTC) πͺπ Opposites + Structural Lock Key β rpsD_gene@7, 8, 10, 22, 31...,177, 183, 185, 206 201+1,3+8:AAG,CCT <> π΄ High Energy Collision 20, 72, 107 3+7:TTC
π° @128 (20+16:CGT) πͺ Opposites β rpsD_gene@2, 79, 80, 112, 114, 122 204+2:GCA <> π΄ High Energy Collision 13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT
π’ @129 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π’ @130 (203+2:CAG) πͺ Opposites β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 40, 54, 71, 116, 136, 152, 164 203+2:CAG
π· @131 (204+1:GAC) πͺ Opposites β rpsD_gene@11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG <> π΄π‘βοΈ Opposites 18, 26, 33, 45, 50...,148, 154, 156, 194 204+1,204+5,205+1:AAA,CGC,GAC
π· @134 (20+13:CAC) πͺ Opposites β rpsD_gene@53, 67, 155 20+23:GTG <> π΄ High Energy Collision 41, 198 20+13:CAC
π’ @135 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @136 (201+2:AAC) πͺ Opposites β rpsD_gene@5, 55, 91 5+3:TTG <> π΄ High Energy Collision 74, 85, 89, 100, 126, 131, 196 201+2:AAC
π’ @137 (5+7:TCC) β Flow Figure8 β rpsD_gene@17, 30, 86, 169 5+8:ACC <> π΄ High Energy Collision 205 5+7:TCC
π° @138 (5+3:TTG) βπͺ Flow Figure8 + Opposites β rpsD_gene@25, 61, 74, 85, 89...,137, 142, 173, 196 201+2,5+4:AAC,GTT <> π΄ High Energy Collision 5, 55, 91 5+3:TTG
π’ @139 (5+1:TCT) βπͺ Flow Figure8 + Opposites β rpsD_gene@3, 32 201+3,5+2:AGA,TGT <> π΄ High Energy Collision 23, 49, 134, 153, 189, 192 5+1:TCT
π· @140 (20+13:CAC) πͺ Opposites β rpsD_gene@53, 67, 155 20+23:GTG <> π΄ High Energy Collision 41, 198 20+13:CAC
π° @141 (204+5:CGC) πͺ Opposites β rpsD_gene@27, 43, 149, 193 204+3:GCG <> π΄π‘ Opposites 18, 26, 50, 62, 99, 141, 154, 194 204+1,204+5:CGC,GAC
π’ @142 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π’ @143 (20+14:CCG) πͺ Opposites β rpsD_gene@16, 24, 39, 84, 106, 176 202+5:GGC <> π΄ High Energy Collision 46, 139, 186 20+14:CCG
π· @144 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @145 (5+1:TCT) βπͺ Flow Figure8 + Opposites β rpsD_gene@3, 32 201+3,5+2:AGA,TGT <> π΄ High Energy Collision 23, 49, 134, 153, 189, 192 5+1:TCT
π· @147 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @148 (203+2:CAG) πͺ Opposites β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 40, 54, 71, 116, 136, 152, 164 203+2:CAG
π’ @149 (201+2:AAC) πͺ Opposites β rpsD_gene@5, 55, 91 5+3:TTG <> π΄ High Energy Collision 74, 85, 89, 100, 126, 131, 196 201+2:AAC
π’ @150 (203+2:CAG) πͺ Opposites β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 40, 54, 71, 116, 136, 152, 164 203+2:CAG
π· @152 (20+14:CCG) πͺ Opposites β rpsD_gene@16, 24, 39, 84, 106, 176 202+5:GGC <> π΄ High Energy Collision 46, 139, 186 20+14:CCG
π· @153 (202+5:GGC) πͺ Opposites β rpsD_gene@46, 139, 186 20+14:CCG <> π΄ High Energy Collision 16, 24, 39, 84, 106, 176 202+5:GGC
π’ @155 (20+23:GTG) πͺ Opposites β rpsD_gene@41, 198 20+13:CAC <> π΄ High Energy Collision 53, 67, 155 20+23:GTG
π° @156 (3+7:TTC) πͺπ Opposites + Structural Lock Key β rpsD_gene@7, 8, 10, 22, 31...,177, 183, 185, 206 201+1,3+8:AAG,CCT <> π΄ High Energy Collision 20, 72, 107 3+7:TTC
π· @158 (202+5:GGC) πͺ Opposites β rpsD_gene@46, 139, 186 20+14:CCG <> π΄ High Energy Collision 16, 24, 39, 84, 106, 176 202+5:GGC
π’ @159 (201+1:AAG) πͺ Opposites β rpsD_gene@20, 72, 107 3+7:TTC <> π΄ High Energy Collision 8, 10, 22, 31, 58...,177, 183, 185, 206 201+1:AAG
π’ @161 (20+5:ATG) πͺ Opposites β rpsD_gene@75, 76, 103, 204 20+8:TAC <> π΄ High Energy Collision 1, 105, 124, 178 20+5:ATG
π° @162 (204+2:GCA) πͺ Opposites β rpsD_gene@13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT <> π΄ High Energy Collision 2, 79, 80, 112, 114, 122 204+2:GCA
π° @163 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @164 (203+2:CAG) πͺ Opposites β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 40, 54, 71, 116, 136, 152, 164 203+2:CAG
π’ @165 (20+5:ATG) πͺ Opposites β rpsD_gene@75, 76, 103, 204 20+8:TAC <> π΄ High Energy Collision 1, 105, 124, 178 20+5:ATG
π° @166 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π’ @167 (201+2:AAC) πͺ Opposites β rpsD_gene@5, 55, 91 5+3:TTG <> π΄ High Energy Collision 74, 85, 89, 100, 126, 131, 196 201+2:AAC
π’ @169 (20+16:CGT) πͺ Opposites β rpsD_gene@2, 79, 80, 112, 114, 122 204+2:GCA <> π΄ High Energy Collision 13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT
π’ @170 (20+22:GTA) πͺ Opposites β rpsD_gene@120 20+2:CAT <> π΄ High Energy Collision 102, 125, 143 20+22:GTA
π’ @171 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π’ @172 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π· @173 (203+2:CAG) πͺ Opposites β rpsD_gene@201 5+6:GTC <> π΄ High Energy Collision 40, 54, 71, 116, 136, 152, 164 203+2:CAG
π° @176 (204+1:GAC) πͺ Opposites β rpsD_gene@11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG <> π΄π‘βοΈ Opposites 18, 26, 33, 45, 50...,148, 154, 156, 194 204+1,204+5,205+1:AAA,CGC,GAC
π’ @177 (20+22:GTA) πͺ Opposites β rpsD_gene@120 20+2:CAT <> π΄ High Energy Collision 102, 125, 143 20+22:GTA
π’ @178 (20+22:GTA) πͺ Opposites β rpsD_gene@120 20+2:CAT <> π΄ High Energy Collision 102, 125, 143 20+22:GTA
π· @179 (204+5:CGC) πͺ Opposites β rpsD_gene@27, 43, 149, 193 204+3:GCG <> π΄π‘ Opposites 18, 26, 50, 62, 99, 141, 154, 194 204+1,204+5:CGC,GAC
π’ @180 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π· @181 (204+1:GAC) πͺ Opposites β rpsD_gene@11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG <> π΄π‘βοΈ Opposites 18, 26, 33, 45, 50...,148, 154, 156, 194 204+1,204+5,205+1:AAA,CGC,GAC
π’ @183 (202+3:GAG) πͺ Opposites β rpsD_gene@9 20+15:CTC <> π΄ High Energy Collision 15, 35, 57, 69, 78...,179, 187, 197, 202 202+2,202+3:GAA,GAG
π° @184 (204+5:CGC) πͺ Opposites β rpsD_gene@27, 43, 149, 193 204+3:GCG <> π΄π‘ Opposites 18, 26, 50, 62, 99, 141, 154, 194 204+1,204+5:CGC,GAC
π’ @185 (201+2:AAC) πͺ Opposites β rpsD_gene@5, 55, 91 5+3:TTG <> π΄ High Energy Collision 74, 85, 89, 100, 126, 131, 196 201+2:AAC
π° @186 (20+1:CTG) πͺ Opposites β rpsD_gene@18, 50, 99, 141, 194 204+1:GAC <> π΄ High Energy Collision 11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG
π° @187 (20+1:CTG) πͺ Opposites β rpsD_gene@18, 50, 99, 141, 194 204+1:GAC <> π΄ High Energy Collision 11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG
π° @188 (20+1:CTG) πͺ Opposites β rpsD_gene@18, 50, 99, 141, 194 204+1:GAC <> π΄ High Energy Collision 11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG
π’ @189 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π· @191 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π· @193 (5+6:GTC) βπͺ Flow Figure8 + Opposites β rpsD_gene@40, 54, 71, 116, 136, 152, 164, 170 203+2,5+5:CAG,TGG <> π΄ High Energy Collision 201 5+6:GTC
π· @194 (20+14:CCG) πͺ Opposites β rpsD_gene@16, 24, 39, 84, 106, 176 202+5:GGC <> π΄ High Energy Collision 46, 139, 186 20+14:CCG
π· @195 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π° @196 (204+2:GCA) πͺ Opposites β rpsD_gene@13, 14, 44, 47, 56...,146, 165, 184, 188 20+16:CGT <> π΄ High Energy Collision 2, 79, 80, 112, 114, 122 204+2:GCA
π° @197 (5+8:ACC) β Flow Figure8 β rpsD_gene@205 5+7:TCC <> π΄ High Energy Collision 17, 30, 86, 169 5+8:ACC
π’ @198 (20+25:GGT) πͺ Opposites β rpsD_gene@168 203+4:CCA <> π΄ High Energy Collision 6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT
π° @200 (204+1:GAC) πͺ Opposites β rpsD_gene@11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG <> π΄π‘βοΈ Opposites 18, 26, 33, 45, 50...,148, 154, 156, 194 204+1,204+5,205+1:AAA,CGC,GAC
π° @201 (20+1:CTG) πͺ Opposites β rpsD_gene@18, 50, 99, 141, 194 204+1:GAC <> π΄ High Energy Collision 11, 48, 68, 82, 90...,161, 171, 191, 199 20+1:CTG
π’ @203 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rpsD_gene@5, 36, 55, 59, 91 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 25, 61, 101, 118, 129, 130, 137, 142, 173 5+4:GTT
π· @205 (203+4:CCA) πͺ Opposites β rpsD_gene@6, 42, 52, 66, 87, 96, 108, 127, 180 20+25:GGT <> π΄ High Energy Collision 168 203+4:CCA
π° @207 (20+23:GTG) πͺ Opposites β rpsD_gene@41, 198 20+13:CAC <> π΄ High Energy Collision 53, 67, 155 20+23:GTG
π’ @208 (201+1:AAG) πͺ Opposites β rpsD_gene@20, 72, 107 3+7:TTC <> π΄ High Energy Collision 8, 10, 22, 31, 58...,177, 183, 185, 206 201+1:AAG
π’ @209 (204+3:GCG) πͺ Opposites β rpsD_gene@26, 62, 154 204+5:CGC <> π΄ High Energy Collision 27, 43, 149, 193 204+3:GCG
π‘ Assembly Insights:
β’ Bond strength: unknown
β’ Coordination type: unknown
No rna features found for partner gene: {partner_sequence['gene_id']}
𧬠RNA rrsB_gene (1542 nucleotides)
============================================================
π The RNA landscape...
πΈ Sticky loop 1-8 (8), π Bump-1 26, πΈ Sticky loop 557-562 (6), πΈ Sticky loop 913-920 (8), πΈ Sticky loop 1397-1400 (4), πΈ Sticky loop 1502-1505 (4), π Sticky hub 1530-1542 (13)
π Medium stem 9-25 - (4-pair stem - open loops: πΈ Sticky loop 13-21 (9)
10 rplC_gene flipped: 35,91,110,133,151
11 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
11 rplC_gene normal: 138
21 rplC_gene normal: 143,152,194
22 rplC_gene flipped: 95,97,174,199
23 rplC_gene symmetric: 89,183
25 rplC_gene normal: 5,193
25 rplC_gene flipped: 40,79,84,100,186,187,188,201
πΈ Sticky loop 13-21 (9) with 45 candidates
13 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
13 rplC_gene flipped: 138
14 rplC_gene normal: 35,91,110,133,151
16 rplC_gene flipped: 43
18 rplC_gene flipped: 1,11,161,165
18 rplC_gene normal: 24,26,73,92,109,170,177,178
19 rplC_gene normal: 45
20 rplC_gene normal: 5,193
20 rplC_gene flipped: 23,205
π Medium stem 27-550 - (4-pair stem - open loops: π Bump-1 31
29 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
29 rplC_gene flipped: 138
30 rplC_gene normal: 35,91,110,133,151
31 rplC_gene flipped: 15,68,82,90,118,127,156
π Medium stem 32-556 - (6-pair stem - open loops: π Bump-1 38, π° Bump-2 404-405, π° Bump-2 498-499, π Bump-1 546
32 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
32 rplC_gene normal: 138
33 rplC_gene flipped: 13,46,59,77,128,169
34 rplC_gene symmetric: 209
35 rplC_gene flipped: 95,97,174,199
36 rplC_gene normal: 18,39,103,108,131,176,181,200
36 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
37 rplC_gene normal: 5,193
37 rplC_gene flipped: 23,205
38 rplC_gene normal: 143,152,194
405 rplC_gene symmetric: 16,21,113,139,145
499 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
539 rplC_gene flipped: 63
539 rplC_gene normal: 137
541 rplC_gene flipped: 5,193
541 rplC_gene normal: 23,205
542 rplC_gene symmetric: 67,134,140
543 rplC_gene flipped: 31,119,162,196
544 rplC_gene normal: 13,46,59,77,128,169
545 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
545 rplC_gene flipped: 138
546 rplC_gene normal: 15,68,82,90,118,127,156
547 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
548 rplC_gene symmetric: 33,83,124,141,179,184
549 rplC_gene normal: 31,119,162,196
550 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
550 rplC_gene normal: 138
π° Bump-2 404-405 with 3 candidates
404 rplC_gene symmetric: 67,134,140
π° Bump-2 498-499 with 7 candidates
498 rplC_gene normal: 15,68,82,90,118,127,156
βοΈ Belt 39-403 - (9-pair stem - open loops: πΈ Sticky loop 48-51 (4), πΈ Sticky loop 361-366 (6), π Bump-1 394, π Bump-1 397)
39 rplC_gene symmetric: 33,83,124,141,179,184
40 rplC_gene flipped: 143,152,194
41 rplC_gene normal: 143,152,194
42 rplC_gene normal: 13,46,59,77,128,169
43 rplC_gene normal: 5,193
43 rplC_gene flipped: 40,79,84,100,186,187,188,201
44 rplC_gene flipped: 63
44 rplC_gene normal: 137
45 rplC_gene normal: 143,152,194
46 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
47 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
47 rplC_gene normal: 15,68,82,90,118,127,156
358 rplC_gene normal: 5,193
358 rplC_gene flipped: 23,205
391 rplC_gene normal: 13,46,59,77,128,169
392 rplC_gene normal: 5,193
392 rplC_gene flipped: 40,79,84,100,186,187,188,201
393 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
394 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
395 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
395 rplC_gene flipped: 137
396 rplC_gene flipped: 1,11,161,165
396 rplC_gene normal: 24,26,73,92,109,170,177,178
397 rplC_gene normal: 45
398 rplC_gene flipped: 31,119,162,196
399 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
400 rplC_gene normal: 19,44,66,72,76,87,111,153,158
401 rplC_gene symmetric: 209
402 rplC_gene symmetric: 33,83,124,141,179,184
403 rplC_gene normal: 31,119,162,196
πΈ Sticky loop 48-51 (4) with 16 candidates
48 rplC_gene normal: 43
49 rplC_gene flipped: 4
50 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
50 rplC_gene normal: 138
πΈ Sticky loop 361-366 (6) with 10 candidates
361 rplC_gene normal: 63
361 rplC_gene flipped: 137
362 rplC_gene flipped: 15,68,82,90,118,127,156
363 rplC_gene normal: 4
π Short stem 52-357 - 3-pair stem - open loops: π Bump-1 55
52 rplC_gene symmetric: 9,50,60,155,207
54 rplC_gene flipped: 1,11,161,165
54 rplC_gene normal: 24,26,73,92,109,170,177,178
55 rplC_gene normal: 45
π Short stem 56-360 - 3-pair stem - open loops: π° Bump-2 59-60, πΈ Sticky loop 107-112 (6), π Bump-1 315, π Bump-1 338, π± Sticky-3 351-353
56 rplC_gene flipped: 31,119,162,196
57 rplC_gene normal: 13,46,59,77,128,169
58 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
58 rplC_gene flipped: 138
60 rplC_gene flipped: 35,91,110,133,151
105 rplC_gene symmetric: 33,83,124,141,179,184
106 rplC_gene flipped: 143,152,194
112 rplC_gene flipped: 5,193
112 rplC_gene normal: 23,205
311 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
311 rplC_gene flipped: 137
312 rplC_gene symmetric: 9,50,60,155,207
314 rplC_gene symmetric: 9,50,60,155,207
353 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
354 rplC_gene normal: 13,46,59,77,128,169
355 rplC_gene normal: 5,193
355 rplC_gene flipped: 40,79,84,100,186,187,188,201
356 rplC_gene flipped: 35,91,110,133,151
357 rplC_gene symmetric: 67,134,140
π° Bump-2 59-60 with 7 candidates
59 rplC_gene normal: 15,68,82,90,118,127,156
πΈ Sticky loop 107-112 (6) with 21 candidates
107 rplC_gene normal: 63
107 rplC_gene flipped: 137
108 rplC_gene flipped: 5,193
108 rplC_gene normal: 40,79,84,100,186,187,188,201
109 rplC_gene flipped: 13,46,59,77,128,169
110 rplC_gene flipped: 143,152,194
π± Sticky-3 351-353 with 16 candidates
351 rplC_gene normal: 13,46,59,77,128,169
352 rplC_gene normal: 5,193
352 rplC_gene flipped: 40,79,84,100,186,187,188,201
π Short stem 61-104 - 3-pair stem - open loops: π° Bump-2 64-65
61 rplC_gene flipped: 18,39,103,108,131,176,181,200
61 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
62 rplC_gene normal: 95,97,174,199
63 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
65 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
65 rplC_gene normal: 138
π° Bump-2 64-65 with 7 candidates
64 rplC_gene flipped: 15,68,82,90,118,127,156
π Short stem 66-106 - 2-pair stem - open loops: π Bump-1 68, π° Bump-2 100-101
66 rplC_gene flipped: 13,46,59,77,128,169
67 rplC_gene flipped: 143,152,194
68 rplC_gene flipped: 5,193
68 rplC_gene normal: 23,205
97 rplC_gene flipped: 5,193
97 rplC_gene normal: 40,79,84,100,186,187,188,201
98 rplC_gene flipped: 13,46,59,77,128,169
99 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
101 rplC_gene flipped: 35,91,110,133,151
102 rplC_gene symmetric: 67,134,140
103 rplC_gene normal: 5,193
103 rplC_gene flipped: 23,205
104 rplC_gene normal: 143,152,194
π Short stem 69-96 - 2-pair stem - open loops: π° Bump-2 71-72
69 rplC_gene flipped: 45
70 rplC_gene flipped: 4
π° Bump-2 71-72 with 14 candidates
71 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
71 rplC_gene normal: 138
βοΈ Belt 73-99 - (10-pair stem - open loops: πΈ Sticky loop 83-86 (4), π Bump-1 94)
73 rplC_gene normal: 5,193
73 rplC_gene flipped: 40,79,84,100,186,187,188,201
74 rplC_gene flipped: 63
74 rplC_gene normal: 137
75 rplC_gene normal: 63
75 rplC_gene flipped: 137
76 rplC_gene flipped: 15,68,82,90,118,127,156
77 rplC_gene normal: 15,68,82,90,118,127,156
78 rplC_gene symmetric: 21,113,139,145
79 rplC_gene flipped: 15,68,82,90,118,127,156
80 rplC_gene normal: 15,68,82,90,118,127,156
81 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
82 rplC_gene flipped: 95,97,174,199
86 rplC_gene flipped: 95,97,174,199
87 rplC_gene flipped: 62,63,123,159,208
88 rplC_gene normal: 62,63,123,159,208
90 rplC_gene flipped: 62,63,123,159,208
92 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
92 rplC_gene flipped: 138
93 rplC_gene flipped: 31,119,162,196
94 rplC_gene flipped: 95,97,174,199
95 rplC_gene normal: 18,39,103,108,131,176,181,200
95 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
96 rplC_gene normal: 35,91,110,133,151
πΈ Sticky loop 83-86 (4) with 31 candidates
83 rplC_gene flipped: 62,63,123,159,208
84 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
84 rplC_gene flipped: 138
85 rplC_gene flipped: 31,119,162,196
π Short stem 113-310 - 3-pair stem - open loops: πΈ Sticky loop 116-121 (6), π° Bump-2 287-288
113 rplC_gene symmetric: 67,134,140
114 rplC_gene normal: 35,91,110,133,151
121 rplC_gene symmetric: 16,21,113,139,145
288 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky loop 116-121 (6) with 9 candidates
116 rplC_gene flipped: 35,91,110,133,151
117 rplC_gene flipped: 45
118 rplC_gene flipped: 4
119 rplC_gene normal: 4
120 rplC_gene normal: 45
βοΈ Belt 122-239 - (7-pair stem - open loops: π° Bump-2 129-130, π Bump-1 232)
122 rplC_gene flipped: 18,39,103,108,131,176,181,200
122 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
124 rplC_gene normal: 18,39,103,108,131,176,181,200
124 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
125 rplC_gene normal: 5,193
125 rplC_gene flipped: 23,205
127 rplC_gene normal: 63
127 rplC_gene flipped: 137
128 rplC_gene flipped: 15,68,82,90,118,127,156
130 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
130 rplC_gene normal: 138
232 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
234 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
234 rplC_gene flipped: 137
235 rplC_gene normal: 5,193
235 rplC_gene flipped: 40,79,84,100,186,187,188,201
236 rplC_gene symmetric: 21,113,139,145
238 rplC_gene normal: 45
239 rplC_gene normal: 5,193
239 rplC_gene flipped: 23,205
π Short stem 131-231 - 2-pair stem - open loops: π± Sticky-3 133-135, π° Bump-2 228-229
132 rplC_gene normal: 18,39,103,108,131,176,181,200
132 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
135 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
135 rplC_gene normal: 15,68,82,90,118,127,156
229 rplC_gene symmetric: 16,21,113,139,145
230 rplC_gene symmetric: 67,134,140
231 rplC_gene flipped: 31,119,162,196
π± Sticky-3 133-135 with 13 candidates
133 rplC_gene flipped: 31,119,162,196
134 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
π° Bump-2 228-229 with 1 candidates
228 rplC_gene normal: 45
βοΈ Belt 136-227 - (7-pair stem - open loops: π Bump-1 143, π Bump-1 179, π° Bump-2 196-197, π Bump-1 220)
136 rplC_gene normal: 18,39,103,108,131,176,181,200
136 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
137 rplC_gene normal: 35,91,110,133,151
139 rplC_gene normal: 45
140 rplC_gene normal: 5,193
140 rplC_gene flipped: 23,205
141 rplC_gene normal: 63
141 rplC_gene flipped: 137
143 rplC_gene flipped: 63
143 rplC_gene normal: 137
197 rplC_gene symmetric: 21,113,139,145
218 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
218 rplC_gene flipped: 138
219 rplC_gene flipped: 31,119,162,196
220 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
221 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
221 rplC_gene flipped: 137
222 rplC_gene flipped: 1,11,161,165
222 rplC_gene normal: 24,26,73,92,109,170,177,178
223 rplC_gene flipped: 43
224 rplC_gene normal: 95,97,174,199
225 rplC_gene flipped: 143,152,194
226 rplC_gene normal: 63
226 rplC_gene flipped: 137
π° Bump-2 196-197 with 7 candidates
196 rplC_gene normal: 15,68,82,90,118,127,156
π Short stem 144-178 - 1-pair stem - open loops: π Bump-1 145, π Bump-1 177
177 rplC_gene normal: 13,46,59,77,128,169
178 rplC_gene flipped: 1,11,161,165
178 rplC_gene normal: 24,26,73,92,109,170,177,178
π Short stem 146-176 - 2-pair stem - open loops: πΈ Sticky five 148-152, πΈ Sticky loop 169-174 (6)
147 rplC_gene normal: 63
147 rplC_gene flipped: 137
174 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
174 rplC_gene normal: 137
175 rplC_gene normal: 19,44,66,72,76,87,111,153,158
176 rplC_gene symmetric: 209
πΈ Sticky five 148-152 with 15 candidates
150 rplC_gene flipped: 4
151 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
151 rplC_gene normal: 138
πΈ Sticky loop 169-174 (6) with 15 candidates
169 rplC_gene normal: 43
170 rplC_gene flipped: 4
171 rplC_gene normal: 4
173 rplC_gene normal: 1,11,161,165
173 rplC_gene flipped: 24,26,73,92,109,170,177,178
π Medium stem 153-168 - (6-pair stem - open loops: πΈ Sticky loop 159-162 (4)
153 rplC_gene normal: 43
154 rplC_gene normal: 1,11,161,165
154 rplC_gene flipped: 24,26,73,92,109,170,177,178
156 rplC_gene normal: 18,39,103,108,131,176,181,200
156 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
157 rplC_gene normal: 5,193
157 rplC_gene flipped: 23,205
158 rplC_gene normal: 63
158 rplC_gene flipped: 137
162 rplC_gene flipped: 13,46,59,77,128,169
163 rplC_gene flipped: 143,152,194
164 rplC_gene flipped: 5,193
164 rplC_gene normal: 23,205
165 rplC_gene flipped: 45
167 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
168 rplC_gene flipped: 95,97,174,199
πΈ Sticky loop 159-162 (4) with 21 candidates
159 rplC_gene flipped: 15,68,82,90,118,127,156
161 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
161 rplC_gene normal: 138
π Short stem 180-195 - 1-pair stem - open loops: π± Sticky-3 181-183, π Bump-1 194
180 rplC_gene flipped: 4
183 rplC_gene normal: 31,119,162,196
194 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
194 rplC_gene flipped: 138
π± Sticky-3 181-183 with 20 candidates
181 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
181 rplC_gene normal: 138
182 rplC_gene flipped: 13,46,59,77,128,169
π Short stem 184-193 - 3-pair stem - open loops: πΈ Sticky loop 187-190 (4)
184 rplC_gene flipped: 18,39,103,108,131,176,181,200
184 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
185 rplC_gene normal: 95,97,174,199
186 rplC_gene symmetric: 209
190 rplC_gene symmetric: 21,113,139,145
191 rplC_gene flipped: 5,193
191 rplC_gene normal: 40,79,84,100,186,187,188,201
192 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
192 rplC_gene normal: 137
193 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
193 rplC_gene flipped: 137
πΈ Sticky loop 187-190 (4) with 27 candidates
187 rplC_gene normal: 13,46,59,77,128,169
188 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
188 rplC_gene flipped: 138
189 rplC_gene normal: 15,68,82,90,118,127,156
π Medium stem 198-217 - (6-pair stem - open loops: π° Bump-2 204-205
199 rplC_gene flipped: 63
199 rplC_gene normal: 137
203 rplC_gene normal: 63
203 rplC_gene flipped: 137
205 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
205 rplC_gene normal: 137
π° Bump-2 204-205 with 10 candidates
204 rplC_gene flipped: 5,193
204 rplC_gene normal: 40,79,84,100,186,187,188,201
π Short stem 206-219 - 2-pair stem - open loops: πΈ Sticky loop 208-211 (4)
206 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
206 rplC_gene normal: 15,68,82,90,118,127,156
207 rplC_gene flipped: 62,63,123,159,208
212 rplC_gene normal: 143,152,194
213 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
214 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
214 rplC_gene normal: 15,68,82,90,118,127,156
215 rplC_gene symmetric: 89,183
217 rplC_gene flipped: 62,63,123,159,208
πΈ Sticky loop 208-211 (4) with 12 candidates
208 rplC_gene normal: 62,63,123,159,208
209 rplC_gene normal: 95,97,174,199
210 rplC_gene flipped: 143,152,194
π Short stem 240-286 - 3-pair stem - open loops: πΈ Sticky loop 243-246 (4), πΈ Sticky loop 278-283 (6)
241 rplC_gene normal: 63
241 rplC_gene flipped: 137
246 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
270 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
270 rplC_gene normal: 137
271 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
271 rplC_gene normal: 15,68,82,90,118,127,156
272 rplC_gene normal: 43
274 rplC_gene flipped: 63
274 rplC_gene normal: 137
275 rplC_gene normal: 143,152,194
276 rplC_gene symmetric: 33,83,124,141,179,184
277 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
283 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
283 rplC_gene flipped: 15,68,82,90,118,127,156
285 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
285 rplC_gene normal: 15,68,82,90,118,127,156
286 rplC_gene normal: 43
πΈ Sticky loop 278-283 (6) with 31 candidates
278 rplC_gene flipped: 5,193
278 rplC_gene normal: 40,79,84,100,186,187,188,201
279 rplC_gene flipped: 13,46,59,77,128,169
280 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
282 rplC_gene flipped: 43
π Short stem 247-269 - 3-pair stem - open loops: π° Bump-2 250-251
247 rplC_gene flipped: 95,97,174,199
248 rplC_gene normal: 43
251 rplC_gene flipped: 45
π° Bump-2 250-251 with 5 candidates
250 rplC_gene flipped: 35,91,110,133,151
βοΈ Belt 252-277 - (8-pair stem - open loops: πΈ Sticky loop 260-266 (7))
253 rplC_gene flipped: 63
253 rplC_gene normal: 137
254 rplC_gene flipped: 5,193
254 rplC_gene normal: 23,205
255 rplC_gene symmetric: 67,134,140
256 rplC_gene normal: 5,193
256 rplC_gene flipped: 23,205
259 rplC_gene flipped: 5,193
259 rplC_gene normal: 23,205
266 rplC_gene flipped: 95,97,174,199
267 rplC_gene symmetric: 89,183
269 rplC_gene symmetric: 9,50,60,155,207
πΈ Sticky loop 260-266 (7) with 28 candidates
260 rplC_gene flipped: 45
261 rplC_gene flipped: 4
262 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
262 rplC_gene normal: 138
263 rplC_gene flipped: 13,46,59,77,128,169
264 rplC_gene flipped: 143,152,194
265 rplC_gene normal: 143,152,194
βοΈ Belt 289-314 - (8-pair stem - open loops: πΈ Sticky loop 297-300 (4), π± Sticky-3 305-307)
289 rplC_gene flipped: 95,97,174,199
290 rplC_gene normal: 18,39,103,108,131,176,181,200
290 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
291 rplC_gene normal: 5,193
291 rplC_gene flipped: 23,205
292 rplC_gene flipped: 5,193
292 rplC_gene normal: 23,205
293 rplC_gene flipped: 18,39,103,108,131,176,181,200
293 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
295 rplC_gene normal: 18,39,103,108,131,176,181,200
295 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
296 rplC_gene normal: 35,91,110,133,151
300 rplC_gene flipped: 63
300 rplC_gene normal: 137
301 rplC_gene normal: 63
301 rplC_gene flipped: 137
303 rplC_gene normal: 45
304 rplC_gene normal: 35,91,110,133,151
307 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
307 rplC_gene flipped: 137
308 rplC_gene normal: 5,193
308 rplC_gene flipped: 40,79,84,100,186,187,188,201
309 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
310 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
πΈ Sticky loop 297-300 (4) with 4 candidates
298 rplC_gene symmetric: 21,113,139,145
π± Sticky-3 305-307 with 28 candidates
305 rplC_gene flipped: 5,193
305 rplC_gene normal: 40,79,84,100,186,187,188,201
306 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
306 rplC_gene normal: 137
π Medium stem 316-337 - (5-pair stem - open loops: π Sticky hub 321-332 (12)
316 rplC_gene normal: 18,39,103,108,131,176,181,200
316 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
317 rplC_gene normal: 5,193
317 rplC_gene flipped: 23,205
318 rplC_gene normal: 63
318 rplC_gene flipped: 137
319 rplC_gene flipped: 15,68,82,90,118,127,156
320 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
320 rplC_gene normal: 138
332 rplC_gene flipped: 18,39,103,108,131,176,181,200
332 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
333 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
333 rplC_gene flipped: 15,68,82,90,118,127,156
334 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
334 rplC_gene flipped: 137
335 rplC_gene normal: 5,193
335 rplC_gene flipped: 40,79,84,100,186,187,188,201
336 rplC_gene symmetric: 21,113,139,145
337 rplC_gene flipped: 5,193
337 rplC_gene normal: 40,79,84,100,186,187,188,201
π Sticky hub 321-332 (12) with 55 candidates
322 rplC_gene normal: 18,39,103,108,131,176,181,200
322 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
323 rplC_gene normal: 35,91,110,133,151
325 rplC_gene symmetric: 21,113,139,145
326 rplC_gene flipped: 5,193
326 rplC_gene normal: 40,79,84,100,186,187,188,201
328 rplC_gene symmetric: 9,50,60,155,207
329 rplC_gene flipped: 13,46,59,77,128,169
330 rplC_gene flipped: 143,152,194
331 rplC_gene flipped: 5,193
331 rplC_gene normal: 23,205
π Medium stem 339-350 - (4-pair stem - open loops: πΈ Sticky loop 343-346 (4)
339 rplC_gene symmetric: 89,183
340 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
340 rplC_gene flipped: 15,68,82,90,118,127,156
341 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
341 rplC_gene normal: 15,68,82,90,118,127,156
342 rplC_gene normal: 43
347 rplC_gene normal: 63
347 rplC_gene flipped: 137
349 rplC_gene flipped: 63
349 rplC_gene normal: 137
350 rplC_gene normal: 143,152,194
πΈ Sticky loop 343-346 (4) with 21 candidates
343 rplC_gene normal: 1,11,161,165
343 rplC_gene flipped: 24,26,73,92,109,170,177,178
344 rplC_gene flipped: 13,46,59,77,128,169
345 rplC_gene flipped: 143,152,194
π Short stem 367-390 - 1-pair stem - open loops: π Bump-1 368
367 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
367 rplC_gene flipped: 138
368 rplC_gene flipped: 31,119,162,196
π Short stem 369-393 - 3-pair stem - open loops: π± Sticky-3 372-374, π Bump-1 389
369 rplC_gene normal: 13,46,59,77,128,169
370 rplC_gene symmetric: 9,50,60,155,207
374 rplC_gene normal: 45
389 rplC_gene normal: 45
390 rplC_gene flipped: 31,119,162,196
π± Sticky-3 372-374 with 15 candidates
372 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
372 rplC_gene flipped: 138
373 rplC_gene normal: 4
π Medium stem 375-388 - (5-pair stem - open loops: πΈ Sticky loop 380-383 (4)
375 rplC_gene normal: 5,193
375 rplC_gene flipped: 23,205
377 rplC_gene normal: 143,152,194
378 rplC_gene symmetric: 33,83,124,141,179,184
379 rplC_gene symmetric: 209
383 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
384 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
385 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
385 rplC_gene normal: 15,68,82,90,118,127,156
386 rplC_gene normal: 18,39,103,108,131,176,181,200
386 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
387 rplC_gene normal: 35,91,110,133,151
πΈ Sticky loop 380-383 (4) with 27 candidates
380 rplC_gene normal: 13,46,59,77,128,169
381 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
381 rplC_gene flipped: 138
382 rplC_gene normal: 15,68,82,90,118,127,156
π Medium stem 406-436 - (4-pair stem - open loops: πΈ Sticky loop 410-415 (6), πΈ Sticky five 428-432
406 rplC_gene flipped: 45
408 rplC_gene normal: 45
409 rplC_gene normal: 35,91,110,133,151
415 rplC_gene flipped: 63
415 rplC_gene normal: 137
432 rplC_gene flipped: 35,91,110,133,151
433 rplC_gene flipped: 45
434 rplC_gene normal: 1,11,161,165
434 rplC_gene flipped: 24,26,73,92,109,170,177,178
436 rplC_gene flipped: 62,63,123,159,208
πΈ Sticky loop 410-415 (6) with 32 candidates
410 rplC_gene flipped: 15,68,82,90,118,127,156
411 rplC_gene normal: 15,68,82,90,118,127,156
412 rplC_gene symmetric: 21,113,139,145
413 rplC_gene flipped: 15,68,82,90,118,127,156
414 rplC_gene normal: 15,68,82,90,118,127,156
πΈ Sticky five 428-432 with 9 candidates
428 rplC_gene flipped: 45
429 rplC_gene flipped: 4
431 rplC_gene normal: 15,68,82,90,118,127,156
π Medium stem 416-427 - (4-pair stem - open loops: πΈ Sticky loop 420-423 (4)
416 rplC_gene normal: 143,152,194
417 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
418 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
418 rplC_gene normal: 15,68,82,90,118,127,156
419 rplC_gene flipped: 62,63,123,159,208
424 rplC_gene flipped: 5,193
424 rplC_gene normal: 23,205
425 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
425 rplC_gene normal: 138
426 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
426 rplC_gene flipped: 138
427 rplC_gene symmetric: 16,21,113,139,145
πΈ Sticky loop 420-423 (4) with 12 candidates
420 rplC_gene normal: 62,63,123,159,208
421 rplC_gene normal: 95,97,174,199
422 rplC_gene flipped: 143,152,194
π Medium stem 437-497 - (4-pair stem - open loops: π Bump-1 441, π Bump-1 493
438 rplC_gene normal: 62,63,123,159,208
440 rplC_gene normal: 5,193
440 rplC_gene flipped: 40,79,84,100,186,187,188,201
441 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
493 rplC_gene symmetric: 21,113,139,145
494 rplC_gene flipped: 15,68,82,90,118,127,156
495 rplC_gene normal: 15,68,82,90,118,127,156
496 rplC_gene symmetric: 21,113,139,145
497 rplC_gene flipped: 15,68,82,90,118,127,156
π Medium stem 442-492 - (5-pair stem - open loops: π Bump-1 447, π Bump-1 487
442 rplC_gene symmetric: 33,83,124,141,179,184
443 rplC_gene flipped: 143,152,194
446 rplC_gene normal: 63
446 rplC_gene flipped: 137
487 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
487 rplC_gene normal: 137
489 rplC_gene normal: 19,44,66,72,76,87,111,153,158
490 rplC_gene symmetric: 209
491 rplC_gene normal: 13,46,59,77,128,169
492 rplC_gene normal: 5,193
492 rplC_gene flipped: 40,79,84,100,186,187,188,201
π Short stem 448-486 - 1-pair stem - open loops: π Bump-1 449, π° Bump-2 484-485
448 rplC_gene flipped: 63
448 rplC_gene normal: 137
449 rplC_gene normal: 63
449 rplC_gene flipped: 137
486 rplC_gene normal: 1,11,161,165
486 rplC_gene flipped: 24,26,73,92,109,170,177,178
π° Bump-2 484-485 with 22 candidates
484 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
484 rplC_gene normal: 138
π Short stem 450-483 - 1-pair stem - open loops: πΈ Sticky loop 451-454 (4), πΈ Sticky five 478-482
450 rplC_gene flipped: 15,68,82,90,118,127,156
454 rplC_gene normal: 63
454 rplC_gene flipped: 137
482 rplC_gene flipped: 13,46,59,77,128,169
483 rplC_gene normal: 31,119,162,196
πΈ Sticky loop 451-454 (4) with 9 candidates
451 rplC_gene normal: 15,68,82,90,118,127,156
452 rplC_gene flipped: 63
452 rplC_gene normal: 137
πΈ Sticky five 478-482 with 37 candidates
479 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
479 rplC_gene flipped: 138
480 rplC_gene normal: 35,91,110,133,151
481 rplC_gene flipped: 5,193
481 rplC_gene normal: 40,79,84,100,186,187,188,201
βοΈ Belt 455-477 - (8-pair stem - open loops: πΈ Sticky loop 463-469 (7))
456 rplC_gene flipped: 35,91,110,133,151
457 rplC_gene flipped: 45
458 rplC_gene flipped: 4
460 rplC_gene normal: 15,68,82,90,118,127,156
461 rplC_gene flipped: 35,91,110,133,151
462 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
462 rplC_gene normal: 138
469 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
469 rplC_gene normal: 15,68,82,90,118,127,156
470 rplC_gene flipped: 62,63,123,159,208
472 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
472 rplC_gene flipped: 138
473 rplC_gene flipped: 31,119,162,196
474 rplC_gene flipped: 95,97,174,199
475 rplC_gene symmetric: 89,183
477 rplC_gene flipped: 1,11,161,165
477 rplC_gene normal: 24,26,73,92,109,170,177,178
πΈ Sticky loop 463-469 (7) with 32 candidates
464 rplC_gene flipped: 4
465 rplC_gene normal: 4
467 rplC_gene normal: 1,11,161,165
467 rplC_gene flipped: 24,26,73,92,109,170,177,178
468 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
468 rplC_gene normal: 137
π Medium stem 500-538 - (5-pair stem - open loops: πΈ Sticky loop 505-510 (6)
500 rplC_gene normal: 13,46,59,77,128,169
501 rplC_gene symmetric: 9,50,60,155,207
502 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
502 rplC_gene normal: 137
503 rplC_gene normal: 19,44,66,72,76,87,111,153,158
504 rplC_gene flipped: 143,152,194
πΈ Sticky loop 505-510 (6) with 23 candidates
505 rplC_gene normal: 143,152,194
506 rplC_gene flipped: 95,97,174,199
507 rplC_gene normal: 43
508 rplC_gene flipped: 4
509 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
509 rplC_gene normal: 138
βοΈ Belt 511-545 - (7-pair stem - open loops: π± Sticky-3 518-520, πΈ Sticky five 529-533)
511 rplC_gene symmetric: 89,183
512 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
512 rplC_gene flipped: 15,68,82,90,118,127,156
513 rplC_gene normal: 19,44,66,72,76,87,111,153,158
514 rplC_gene normal: 31,119,162,196
515 rplC_gene symmetric: 67,134,140
516 rplC_gene flipped: 31,119,162,196
517 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
520 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
534 rplC_gene normal: 1,11,161,165
534 rplC_gene flipped: 24,26,73,92,109,170,177,178
535 rplC_gene flipped: 13,46,59,77,128,169
536 rplC_gene flipped: 143,152,194
537 rplC_gene normal: 63
537 rplC_gene flipped: 137
π± Sticky-3 518-520 with 28 candidates
518 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
518 rplC_gene flipped: 137
519 rplC_gene normal: 5,193
519 rplC_gene flipped: 40,79,84,100,186,187,188,201
πΈ Sticky five 529-533 with 7 candidates
529 rplC_gene flipped: 5,193
529 rplC_gene normal: 23,205
530 rplC_gene flipped: 45
531 rplC_gene flipped: 4
532 rplC_gene normal: 4
π Short stem 521-528 - 2-pair stem - open loops: πΈ Sticky loop 523-526 (4)
521 rplC_gene normal: 13,46,59,77,128,169
522 rplC_gene normal: 5,193
522 rplC_gene flipped: 40,79,84,100,186,187,188,201
526 rplC_gene symmetric: 209
527 rplC_gene symmetric: 33,83,124,141,179,184
528 rplC_gene flipped: 143,152,194
πΈ Sticky loop 523-526 (4) with 32 candidates
523 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
524 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
525 rplC_gene normal: 19,44,66,72,76,87,111,153,158
π Short stem 563-881 - 1-pair stem - open loops: π± Sticky-3 564-566
π± Sticky-3 564-566 with 22 candidates
564 rplC_gene normal: 18,39,103,108,131,176,181,200
564 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
565 rplC_gene normal: 5,193
565 rplC_gene flipped: 23,205
π Short stem 567-884 - 3-pair stem - open loops: πΈ Sticky loop 570-576 (7), π Bump-1 765, πΈ Sticky loop 814-820 (7), π Bump-1 880
567 rplC_gene normal: 143,152,194
568 rplC_gene symmetric: 33,83,124,141,179,184
569 rplC_gene normal: 31,119,162,196
576 rplC_gene symmetric: 209
765 rplC_gene flipped: 15,68,82,90,118,127,156
820 rplC_gene symmetric: 16,21,113,139,145
880 rplC_gene symmetric: 209
881 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
πΈ Sticky loop 570-576 (7) with 29 candidates
570 rplC_gene flipped: 45
571 rplC_gene flipped: 4
573 rplC_gene normal: 15,68,82,90,118,127,156
574 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
575 rplC_gene symmetric: 33,83,124,141,179,184
πΈ Sticky loop 814-820 (7) with 35 candidates
815 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
815 rplC_gene normal: 138
816 rplC_gene flipped: 13,46,59,77,128,169
817 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
819 rplC_gene normal: 45
π Medium stem 577-764 - (4-pair stem - open loops: π± Sticky-3 581-583, π± Sticky-3 758-760
577 rplC_gene normal: 13,46,59,77,128,169
578 rplC_gene symmetric: 9,50,60,155,207
579 rplC_gene flipped: 13,46,59,77,128,169
580 rplC_gene symmetric: 209
583 rplC_gene flipped: 63
583 rplC_gene normal: 137
760 rplC_gene flipped: 5,193
760 rplC_gene normal: 23,205
761 rplC_gene symmetric: 67,134,140
762 rplC_gene flipped: 31,119,162,196
763 rplC_gene symmetric: 33,83,124,141,179,184
764 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π± Sticky-3 581-583 with 16 candidates
581 rplC_gene normal: 13,46,59,77,128,169
582 rplC_gene normal: 5,193
582 rplC_gene flipped: 40,79,84,100,186,187,188,201
π± Sticky-3 758-760 with 12 candidates
758 rplC_gene normal: 5,193
758 rplC_gene flipped: 40,79,84,100,186,187,188,201
759 rplC_gene flipped: 63
759 rplC_gene normal: 137
π Short stem 584-756 - 3-pair stem - open loops: π Bump-1 587, π° Bump-2 652-653
584 rplC_gene normal: 143,152,194
585 rplC_gene symmetric: 33,83,124,141,179,184
586 rplC_gene flipped: 143,152,194
587 rplC_gene flipped: 5,193
587 rplC_gene normal: 23,205
650 rplC_gene flipped: 95,97,174,199
651 rplC_gene flipped: 62,63,123,159,208
653 rplC_gene normal: 35,91,110,133,151
π° Bump-2 652-653 with 22 candidates
652 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
652 rplC_gene flipped: 138
βοΈ Belt 588-649 - (7-pair stem - open loops: π Bump-1 595)
588 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
588 rplC_gene normal: 138
590 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
590 rplC_gene flipped: 138
591 rplC_gene symmetric: 16,21,113,139,145
592 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
592 rplC_gene normal: 138
594 rplC_gene flipped: 4
595 rplC_gene normal: 15,68,82,90,118,127,156
βοΈ Belt 596-651 - (11-pair stem - open loops: πΈ Sticky five 607-611, π± Sticky-3 629-631, π° Bump-2 641-642)
596 rplC_gene flipped: 35,91,110,133,151
597 rplC_gene flipped: 18,39,103,108,131,176,181,200
597 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
599 rplC_gene normal: 5,193
599 rplC_gene flipped: 40,79,84,100,186,187,188,201
600 rplC_gene symmetric: 21,113,139,145
602 rplC_gene normal: 45
603 rplC_gene symmetric: 16,21,113,139,145
604 rplC_gene symmetric: 67,134,140
605 rplC_gene normal: 35,91,110,133,151
606 rplC_gene flipped: 15,68,82,90,118,127,156
631 rplC_gene normal: 18,39,103,108,131,176,181,200
631 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
632 rplC_gene flipped: 31,119,162,196
633 rplC_gene normal: 13,46,59,77,128,169
634 rplC_gene flipped: 1,11,161,165
634 rplC_gene normal: 24,26,73,92,109,170,177,178
635 rplC_gene flipped: 43
637 rplC_gene normal: 18,39,103,108,131,176,181,200
637 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
638 rplC_gene normal: 35,91,110,133,151
643 rplC_gene normal: 18,39,103,108,131,176,181,200
643 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
644 rplC_gene normal: 5,193
644 rplC_gene flipped: 23,205
645 rplC_gene normal: 143,152,194
646 rplC_gene normal: 13,46,59,77,128,169
647 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
647 rplC_gene flipped: 138
648 rplC_gene normal: 15,68,82,90,118,127,156
649 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky five 607-611 with 19 candidates
608 rplC_gene normal: 4
609 rplC_gene flipped: 43
610 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
610 rplC_gene flipped: 15,68,82,90,118,127,156
π± Sticky-3 629-631 with 14 candidates
629 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
629 rplC_gene normal: 138
π° Bump-2 641-642 with 12 candidates
641 rplC_gene normal: 1,11,161,165
641 rplC_gene flipped: 24,26,73,92,109,170,177,178
π Medium stem 612-628 - (6-pair stem - open loops: πΈ Sticky five 618-622
613 rplC_gene normal: 19,44,66,72,76,87,111,153,158
614 rplC_gene flipped: 143,152,194
616 rplC_gene normal: 143,152,194
617 rplC_gene flipped: 95,97,174,199
622 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
622 rplC_gene normal: 137
623 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
623 rplC_gene normal: 15,68,82,90,118,127,156
624 rplC_gene normal: 18,39,103,108,131,176,181,200
624 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
625 rplC_gene normal: 5,193
625 rplC_gene flipped: 23,205
627 rplC_gene normal: 63
627 rplC_gene flipped: 137
628 rplC_gene flipped: 15,68,82,90,118,127,156
πΈ Sticky five 618-622 with 30 candidates
618 rplC_gene symmetric: 89,183
620 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
620 rplC_gene flipped: 138
621 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
621 rplC_gene normal: 138
βοΈ Belt 654-757 - (9-pair stem - open loops: π± Sticky-3 663-665, π° Bump-2 741-742, π Bump-1 747, π° Bump-2 752-753)
655 rplC_gene flipped: 35,91,110,133,151
656 rplC_gene flipped: 18,39,103,108,131,176,181,200
656 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
658 rplC_gene symmetric: 89,183
659 rplC_gene normal: 95,97,174,199
660 rplC_gene normal: 31,119,162,196
661 rplC_gene flipped: 45
665 rplC_gene flipped: 63
665 rplC_gene normal: 137
742 rplC_gene flipped: 5,193
742 rplC_gene normal: 40,79,84,100,186,187,188,201
743 rplC_gene flipped: 13,46,59,77,128,169
744 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
745 rplC_gene flipped: 15,68,82,90,118,127,156
746 rplC_gene normal: 15,68,82,90,118,127,156
747 rplC_gene symmetric: 21,113,139,145
748 rplC_gene flipped: 5,193
748 rplC_gene normal: 40,79,84,100,186,187,188,201
750 rplC_gene normal: 18,39,103,108,131,176,181,200
750 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
751 rplC_gene normal: 35,91,110,133,151
753 rplC_gene flipped: 13,46,59,77,128,169
754 rplC_gene symmetric: 209
755 rplC_gene flipped: 95,97,174,199
756 rplC_gene symmetric: 89,183
π± Sticky-3 663-665 with 4 candidates
663 rplC_gene symmetric: 21,113,139,145
π° Bump-2 741-742 with 2 candidates
741 rplC_gene normal: 63
741 rplC_gene flipped: 137
π° Bump-2 752-753 with 10 candidates
752 rplC_gene flipped: 5,193
752 rplC_gene normal: 40,79,84,100,186,187,188,201
βοΈ Belt 666-740 - (8-pair stem - open loops: π± Sticky-3 674-676, π± Sticky-3 714-716, πΈ Sticky loop 718-724 (7), π Bump-1 733)
670 rplC_gene flipped: 5,193
670 rplC_gene normal: 23,205
671 rplC_gene flipped: 45
673 rplC_gene symmetric: 21,113,139,145
717 rplC_gene normal: 1,11,161,165
717 rplC_gene flipped: 24,26,73,92,109,170,177,178
724 rplC_gene normal: 143,152,194
733 rplC_gene normal: 143,152,194
734 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
738 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
738 rplC_gene normal: 15,68,82,90,118,127,156
739 rplC_gene normal: 18,39,103,108,131,176,181,200
739 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
740 rplC_gene normal: 5,193
740 rplC_gene flipped: 23,205
π± Sticky-3 674-676 with 8 candidates
674 rplC_gene flipped: 15,68,82,90,118,127,156
675 rplC_gene normal: 4
π± Sticky-3 714-716 with 8 candidates
714 rplC_gene flipped: 15,68,82,90,118,127,156
715 rplC_gene normal: 4
πΈ Sticky loop 718-724 (7) with 41 candidates
718 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
718 rplC_gene normal: 137
719 rplC_gene normal: 19,44,66,72,76,87,111,153,158
720 rplC_gene flipped: 143,152,194
721 rplC_gene flipped: 5,193
721 rplC_gene normal: 23,205
722 rplC_gene symmetric: 67,134,140
723 rplC_gene normal: 5,193
723 rplC_gene flipped: 23,205
βοΈ Belt 677-713 - (8-pair stem - open loops: π Bump-1 685, π Bump-1 705)
677 rplC_gene normal: 62,63,123,159,208
678 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
678 rplC_gene flipped: 15,68,82,90,118,127,156
679 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
679 rplC_gene flipped: 137
680 rplC_gene normal: 5,193
680 rplC_gene flipped: 40,79,84,100,186,187,188,201
681 rplC_gene flipped: 63
681 rplC_gene normal: 137
682 rplC_gene flipped: 5,193
682 rplC_gene normal: 23,205
683 rplC_gene symmetric: 67,134,140
684 rplC_gene symmetric: 16,21,113,139,145
685 rplC_gene flipped: 45
706 rplC_gene flipped: 43
708 rplC_gene normal: 18,39,103,108,131,176,181,200
708 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
709 rplC_gene normal: 5,193
709 rplC_gene flipped: 23,205
710 rplC_gene normal: 63
710 rplC_gene flipped: 137
712 rplC_gene flipped: 63
712 rplC_gene normal: 137
713 rplC_gene normal: 63
713 rplC_gene flipped: 137
π Short stem 686-704 - 1-pair stem - open loops: π Bump-1 687, πΈ Sticky loop 700-703 (4)
687 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
704 rplC_gene symmetric: 21,113,139,145
πΈ Sticky loop 700-703 (4) with 5 candidates
700 rplC_gene flipped: 45
702 rplC_gene symmetric: 21,113,139,145
π Short stem 688-699 - 3-pair stem - open loops: πΈ Sticky loop 691-696 (6)
688 rplC_gene symmetric: 33,83,124,141,179,184
689 rplC_gene flipped: 143,152,194
690 rplC_gene flipped: 5,193
690 rplC_gene normal: 23,205
696 rplC_gene normal: 45
697 rplC_gene flipped: 31,119,162,196
698 rplC_gene symmetric: 33,83,124,141,179,184
699 rplC_gene normal: 31,119,162,196
πΈ Sticky loop 691-696 (6) with 16 candidates
691 rplC_gene symmetric: 67,134,140
692 rplC_gene normal: 35,91,110,133,151
693 rplC_gene flipped: 15,68,82,90,118,127,156
695 rplC_gene normal: 4
π Short stem 725-732 - 2-pair stem - open loops: πΈ Sticky loop 727-730 (4)
725 rplC_gene symmetric: 33,83,124,141,179,184
726 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
730 rplC_gene normal: 143,152,194
731 rplC_gene symmetric: 33,83,124,141,179,184
732 rplC_gene flipped: 143,152,194
πΈ Sticky loop 727-730 (4) with 16 candidates
727 rplC_gene flipped: 15,68,82,90,118,127,156
728 rplC_gene normal: 15,68,82,90,118,127,156
729 rplC_gene flipped: 63
729 rplC_gene normal: 137
π Short stem 766-813 - 1-pair stem - open loops: π° Bump-2 767-768, π° Bump-2 811-812
768 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
810 rplC_gene normal: 19,44,66,72,76,87,111,153,158
812 rplC_gene flipped: 45
813 rplC_gene flipped: 4
π° Bump-2 767-768 with 7 candidates
767 rplC_gene normal: 15,68,82,90,118,127,156
π° Bump-2 811-812 with 4 candidates
811 rplC_gene normal: 31,119,162,196
βοΈ Belt 769-809 - (7-pair stem - open loops: π± Sticky-3 776-778)
769 rplC_gene symmetric: 33,83,124,141,179,184
770 rplC_gene normal: 31,119,162,196
771 rplC_gene symmetric: 67,134,140
772 rplC_gene normal: 5,193
772 rplC_gene flipped: 23,205
775 rplC_gene normal: 63
775 rplC_gene flipped: 137
778 rplC_gene normal: 13,46,59,77,128,169
π± Sticky-3 776-778 with 14 candidates
777 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 779-810 - 1-pair stem - open loops: π± Sticky-3 780-782, π± Sticky-3 800-802
779 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
779 rplC_gene flipped: 138
802 rplC_gene flipped: 35,91,110,133,151
803 rplC_gene flipped: 18,39,103,108,131,176,181,200
803 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
804 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
804 rplC_gene flipped: 15,68,82,90,118,127,156
805 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
805 rplC_gene flipped: 137
806 rplC_gene symmetric: 9,50,60,155,207
807 rplC_gene flipped: 13,46,59,77,128,169
808 rplC_gene symmetric: 209
809 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
π± Sticky-3 780-782 with 14 candidates
781 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
781 rplC_gene normal: 138
π± Sticky-3 800-802 with 1 candidates
800 rplC_gene flipped: 45
π Medium stem 783-799 - (4-pair stem - open loops: πΈ Sticky loop 787-795 (9)
783 rplC_gene normal: 5,193
783 rplC_gene flipped: 40,79,84,100,186,187,188,201
784 rplC_gene flipped: 63
784 rplC_gene normal: 137
785 rplC_gene normal: 63
785 rplC_gene flipped: 137
796 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
796 rplC_gene normal: 15,68,82,90,118,127,156
797 rplC_gene normal: 18,39,103,108,131,176,181,200
797 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
798 rplC_gene normal: 5,193
798 rplC_gene flipped: 23,205
799 rplC_gene flipped: 5,193
799 rplC_gene normal: 23,205
πΈ Sticky loop 787-795 (9) with 34 candidates
790 rplC_gene symmetric: 21,113,139,145
793 rplC_gene normal: 1,11,161,165
793 rplC_gene flipped: 24,26,73,92,109,170,177,178
794 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
794 rplC_gene normal: 137
βοΈ Belt 821-879 - (7-pair stem - open loops: π Bump-1 828, π± Sticky-3 858-860, πΈ Sticky loop 869-872 (4))
821 rplC_gene flipped: 18,39,103,108,131,176,181,200
821 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
822 rplC_gene normal: 95,97,174,199
823 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
824 rplC_gene flipped: 5,193
824 rplC_gene normal: 40,79,84,100,186,187,188,201
826 rplC_gene flipped: 62,63,123,159,208
827 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
827 rplC_gene flipped: 138
828 rplC_gene normal: 5,193
828 rplC_gene flipped: 23,205
860 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
872 rplC_gene normal: 15,68,82,90,118,127,156
873 rplC_gene flipped: 35,91,110,133,151
874 rplC_gene flipped: 18,39,103,108,131,176,181,200
874 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
875 rplC_gene normal: 95,97,174,199
876 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
877 rplC_gene flipped: 5,193
877 rplC_gene normal: 40,79,84,100,186,187,188,201
878 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
878 rplC_gene normal: 137
879 rplC_gene normal: 19,44,66,72,76,87,111,153,158
π± Sticky-3 858-860 with 2 candidates
858 rplC_gene normal: 63
858 rplC_gene flipped: 137
πΈ Sticky loop 869-872 (4) with 23 candidates
869 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
869 rplC_gene normal: 138
871 rplC_gene flipped: 4
βοΈ Belt 829-857 - (12-pair stem - open loops: πΈ Sticky five 841-845)
829 rplC_gene normal: 63
829 rplC_gene flipped: 137
831 rplC_gene flipped: 63
831 rplC_gene normal: 137
832 rplC_gene flipped: 5,193
832 rplC_gene normal: 23,205
833 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
833 rplC_gene normal: 138
834 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
834 rplC_gene flipped: 138
835 rplC_gene symmetric: 16,21,113,139,145
836 rplC_gene symmetric: 67,134,140
837 rplC_gene flipped: 31,119,162,196
838 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
840 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
840 rplC_gene normal: 15,68,82,90,118,127,156
845 rplC_gene flipped: 63
845 rplC_gene normal: 137
846 rplC_gene normal: 143,152,194
847 rplC_gene symmetric: 33,83,124,141,179,184
848 rplC_gene normal: 31,119,162,196
849 rplC_gene symmetric: 67,134,140
850 rplC_gene normal: 5,193
850 rplC_gene flipped: 23,205
851 rplC_gene normal: 143,152,194
852 rplC_gene flipped: 95,97,174,199
853 rplC_gene flipped: 62,63,123,159,208
854 rplC_gene normal: 62,63,123,159,208
855 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
855 rplC_gene flipped: 15,68,82,90,118,127,156
856 rplC_gene normal: 19,44,66,72,76,87,111,153,158
857 rplC_gene flipped: 143,152,194
πΈ Sticky five 841-845 with 32 candidates
841 rplC_gene flipped: 62,63,123,159,208
842 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
842 rplC_gene flipped: 138
843 rplC_gene normal: 35,91,110,133,151
π Short stem 861-868 - 2-pair stem - open loops: πΈ Sticky loop 863-866 (4)
861 rplC_gene flipped: 95,97,174,199
862 rplC_gene normal: 43
866 rplC_gene symmetric: 209
867 rplC_gene symmetric: 33,83,124,141,179,184
868 rplC_gene normal: 31,119,162,196
πΈ Sticky loop 863-866 (4) with 21 candidates
863 rplC_gene flipped: 4
864 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
864 rplC_gene normal: 138
865 rplC_gene flipped: 13,46,59,77,128,169
π Short stem 885-912 - 3-pair stem - open loops: π± Sticky-3 888-890, π° Bump-2 908-909
887 rplC_gene normal: 63
887 rplC_gene flipped: 137
890 rplC_gene flipped: 45
910 rplC_gene symmetric: 89,183
912 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
912 rplC_gene flipped: 138
π± Sticky-3 888-890 with 5 candidates
889 rplC_gene flipped: 35,91,110,133,151
π° Bump-2 908-909 with 14 candidates
908 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
908 rplC_gene normal: 138
π Short stem 891-907 - 1-pair stem - open loops: π° Bump-2 892-893, π Bump-1 906
891 rplC_gene normal: 1,11,161,165
891 rplC_gene flipped: 24,26,73,92,109,170,177,178
893 rplC_gene flipped: 143,152,194
π° Bump-2 892-893 with 6 candidates
892 rplC_gene flipped: 13,46,59,77,128,169
π Medium stem 894-905 - (4-pair stem - open loops: πΈ Sticky loop 898-901 (4)
894 rplC_gene normal: 143,152,194
895 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
896 rplC_gene normal: 19,44,66,72,76,87,111,153,158
897 rplC_gene symmetric: 209
901 rplC_gene flipped: 63
901 rplC_gene normal: 137
902 rplC_gene flipped: 5,193
902 rplC_gene normal: 23,205
903 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
903 rplC_gene normal: 138
905 rplC_gene flipped: 4
πΈ Sticky loop 898-901 (4) with 27 candidates
898 rplC_gene normal: 13,46,59,77,128,169
899 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
899 rplC_gene flipped: 138
900 rplC_gene normal: 15,68,82,90,118,127,156
π Medium stem 921-1396 - (5-pair stem - open loops: π Bump-1 926, π Bump-1 1394
921 rplC_gene normal: 35,91,110,133,151
922 rplC_gene flipped: 5,193
922 rplC_gene normal: 40,79,84,100,186,187,188,201
923 rplC_gene flipped: 13,46,59,77,128,169
924 rplC_gene flipped: 143,152,194
1395 rplC_gene symmetric: 9,50,60,155,207
βοΈ Belt 927-1393 - (7-pair stem - open loops: π Bump-1 934, π± Sticky-3 1381-1383)
928 rplC_gene normal: 143,152,194
929 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
931 rplC_gene normal: 19,44,66,72,76,87,111,153,158
932 rplC_gene symmetric: 209
933 rplC_gene normal: 13,46,59,77,128,169
934 rplC_gene symmetric: 9,50,60,155,207
1383 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1384 rplC_gene flipped: 143,152,194
1386 rplC_gene normal: 143,152,194
1387 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1388 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1388 rplC_gene normal: 15,68,82,90,118,127,156
1389 rplC_gene flipped: 62,63,123,159,208
1390 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1390 rplC_gene flipped: 138
1391 rplC_gene symmetric: 16,21,113,139,145
1392 rplC_gene flipped: 45
1393 rplC_gene normal: 1,11,161,165
1393 rplC_gene flipped: 24,26,73,92,109,170,177,178
π± Sticky-3 1381-1383 with 17 candidates
1381 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1381 rplC_gene flipped: 15,68,82,90,118,127,156
π Short stem 935-1380 - 2-pair stem - open loops: π° Bump-2 937-938, π± Sticky-3 1345-1347, πΈ Sticky loop 1375-1378 (4)
936 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
936 rplC_gene flipped: 138
938 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1347 rplC_gene flipped: 45
1378 rplC_gene normal: 31,119,162,196
1379 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1379 rplC_gene normal: 138
1380 rplC_gene normal: 62,63,123,159,208
π° Bump-2 937-938 with 7 candidates
937 rplC_gene normal: 15,68,82,90,118,127,156
π± Sticky-3 1345-1347 with 5 candidates
1346 rplC_gene flipped: 35,91,110,133,151
πΈ Sticky loop 1375-1378 (4) with 18 candidates
1376 rplC_gene normal: 1,11,161,165
1376 rplC_gene flipped: 24,26,73,92,109,170,177,178
1377 rplC_gene flipped: 13,46,59,77,128,169
π Medium stem 939-1344 - (5-pair stem - open loops: π° Bump-2 944-945, π Bump-1 1236, π° Bump-2 1338-1339
939 rplC_gene symmetric: 33,83,124,141,179,184
940 rplC_gene flipped: 143,152,194
941 rplC_gene flipped: 5,193
941 rplC_gene normal: 23,205
942 rplC_gene symmetric: 67,134,140
943 rplC_gene normal: 5,193
943 rplC_gene flipped: 23,205
1339 rplC_gene normal: 4
1340 rplC_gene flipped: 43
1341 rplC_gene normal: 95,97,174,199
1342 rplC_gene symmetric: 209
1343 rplC_gene flipped: 95,97,174,199
1344 rplC_gene normal: 43
π° Bump-2 944-945 with 2 candidates
944 rplC_gene normal: 63
944 rplC_gene flipped: 137
π° Bump-2 1338-1339 with 7 candidates
1338 rplC_gene flipped: 15,68,82,90,118,127,156
βοΈ Belt 946-1235 - (10-pair stem - open loops: πΈ Sticky five 956-960, πΈ Sticky loop 975-983 (9), π± Sticky-3 1222-1224, π Bump-1 1227)
946 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
947 rplC_gene normal: 13,46,59,77,128,169
948 rplC_gene flipped: 1,11,161,165
948 rplC_gene normal: 24,26,73,92,109,170,177,178
949 rplC_gene normal: 45
950 rplC_gene symmetric: 16,21,113,139,145
951 rplC_gene symmetric: 67,134,140
952 rplC_gene normal: 5,193
952 rplC_gene flipped: 23,205
953 rplC_gene flipped: 5,193
953 rplC_gene normal: 23,205
954 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
954 rplC_gene normal: 138
960 rplC_gene normal: 62,63,123,159,208
983 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
983 rplC_gene normal: 137
1224 rplC_gene normal: 1,11,161,165
1224 rplC_gene flipped: 24,26,73,92,109,170,177,178
1226 rplC_gene symmetric: 9,50,60,155,207
1228 rplC_gene symmetric: 9,50,60,155,207
1229 rplC_gene flipped: 13,46,59,77,128,169
1230 rplC_gene normal: 31,119,162,196
1231 rplC_gene symmetric: 67,134,140
1232 rplC_gene flipped: 31,119,162,196
1233 rplC_gene flipped: 95,97,174,199
1234 rplC_gene normal: 43
1235 rplC_gene normal: 1,11,161,165
1235 rplC_gene flipped: 24,26,73,92,109,170,177,178
πΈ Sticky five 956-960 with 2 candidates
957 rplC_gene flipped: 4
958 rplC_gene normal: 4
πΈ Sticky loop 975-983 (9) with 77 candidates
975 rplC_gene symmetric: 21,113,139,145
976 rplC_gene flipped: 15,68,82,90,118,127,156
977 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
977 rplC_gene normal: 138
978 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
978 rplC_gene normal: 137
979 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
979 rplC_gene normal: 15,68,82,90,118,127,156
980 rplC_gene flipped: 62,63,123,159,208
982 rplC_gene normal: 1,11,161,165
982 rplC_gene flipped: 24,26,73,92,109,170,177,178
π± Sticky-3 1222-1224 with 5 candidates
1222 rplC_gene flipped: 95,97,174,199
1223 rplC_gene normal: 43
π Short stem 961-974 - 3-pair stem - open loops: πΈ Sticky loop 964-971 (8)
961 rplC_gene normal: 95,97,174,199
962 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
971 rplC_gene symmetric: 33,83,124,141,179,184
972 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
973 rplC_gene flipped: 15,68,82,90,118,127,156
974 rplC_gene normal: 15,68,82,90,118,127,156
πΈ Sticky loop 964-971 (8) with 46 candidates
964 rplC_gene normal: 45
965 rplC_gene flipped: 31,119,162,196
966 rplC_gene normal: 13,46,59,77,128,169
967 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
967 rplC_gene flipped: 138
968 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
968 rplC_gene normal: 138
969 rplC_gene flipped: 13,46,59,77,128,169
970 rplC_gene symmetric: 209
βοΈ Belt 984-1221 - (7-pair stem - open loops: πΈ Sticky loop 991-996 (6), π Bump-1 1045, π± Sticky-3 1212-1214)
984 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
984 rplC_gene normal: 15,68,82,90,118,127,156
985 rplC_gene normal: 18,39,103,108,131,176,181,200
985 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
986 rplC_gene normal: 5,193
986 rplC_gene flipped: 23,205
987 rplC_gene flipped: 5,193
987 rplC_gene normal: 23,205
988 rplC_gene flipped: 18,39,103,108,131,176,181,200
988 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
990 rplC_gene flipped: 62,63,123,159,208
996 rplC_gene flipped: 43
1045 rplC_gene normal: 5,193
1045 rplC_gene flipped: 40,79,84,100,186,187,188,201
1206 rplC_gene normal: 143,152,194
1207 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1209 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1209 rplC_gene normal: 15,68,82,90,118,127,156
1210 rplC_gene flipped: 62,63,123,159,208
1214 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1215 rplC_gene flipped: 5,193
1215 rplC_gene normal: 40,79,84,100,186,187,188,201
1216 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1216 rplC_gene normal: 137
1217 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1217 rplC_gene flipped: 137
1218 rplC_gene normal: 5,193
1218 rplC_gene flipped: 40,79,84,100,186,187,188,201
1219 rplC_gene flipped: 63
1219 rplC_gene normal: 137
1221 rplC_gene normal: 143,152,194
πΈ Sticky loop 991-996 (6) with 49 candidates
991 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
991 rplC_gene flipped: 138
992 rplC_gene normal: 35,91,110,133,151
993 rplC_gene flipped: 5,193
993 rplC_gene normal: 40,79,84,100,186,187,188,201
995 rplC_gene flipped: 1,11,161,165
995 rplC_gene normal: 24,26,73,92,109,170,177,178
π± Sticky-3 1212-1214 with 18 candidates
1212 rplC_gene normal: 1,11,161,165
1212 rplC_gene flipped: 24,26,73,92,109,170,177,178
1213 rplC_gene flipped: 13,46,59,77,128,169
βοΈ Belt 997-1044 - (7-pair stem - open loops: π° Bump-2 1004-1005, π Bump-1 1024, π Bump-1 1042)
997 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
997 rplC_gene flipped: 15,68,82,90,118,127,156
998 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
998 rplC_gene flipped: 137
999 rplC_gene symmetric: 9,50,60,155,207
1000 rplC_gene flipped: 13,46,59,77,128,169
1001 rplC_gene flipped: 143,152,194
1002 rplC_gene normal: 63
1002 rplC_gene flipped: 137
1003 rplC_gene flipped: 15,68,82,90,118,127,156
1005 rplC_gene flipped: 35,91,110,133,151
1024 rplC_gene symmetric: 67,134,140
1042 rplC_gene symmetric: 21,113,139,145
1043 rplC_gene flipped: 5,193
1043 rplC_gene normal: 40,79,84,100,186,187,188,201
π° Bump-2 1004-1005 with 7 candidates
1004 rplC_gene normal: 15,68,82,90,118,127,156
βοΈ Belt 1006-1023 - (7-pair stem - open loops: πΈ Sticky loop 1013-1016 (4))
1006 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1006 rplC_gene normal: 138
1009 rplC_gene normal: 62,63,123,159,208
1011 rplC_gene normal: 5,193
1011 rplC_gene flipped: 40,79,84,100,186,187,188,201
1012 rplC_gene symmetric: 21,113,139,145
1016 rplC_gene normal: 45
1017 rplC_gene normal: 35,91,110,133,151
1019 rplC_gene symmetric: 21,113,139,145
1020 rplC_gene flipped: 15,68,82,90,118,127,156
1021 rplC_gene normal: 4
1022 rplC_gene normal: 45
1023 rplC_gene symmetric: 16,21,113,139,145
πΈ Sticky loop 1013-1016 (4) with 4 candidates
1014 rplC_gene symmetric: 21,113,139,145
π Short stem 1025-1041 - 1-pair stem - open loops: π Bump-1 1026, π Bump-1 1035
1025 rplC_gene flipped: 31,119,162,196
1026 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1035 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1035 rplC_gene normal: 138
1036 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1036 rplC_gene normal: 137
1037 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1038 rplC_gene normal: 31,119,162,196
1039 rplC_gene symmetric: 67,134,140
1040 rplC_gene normal: 35,91,110,133,151
π Short stem 1027-1034 - 2-pair stem - open loops: πΈ Sticky loop 1029-1032 (4)
1027 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1027 rplC_gene normal: 15,68,82,90,118,127,156
1028 rplC_gene flipped: 62,63,123,159,208
1033 rplC_gene normal: 63
1033 rplC_gene flipped: 137
1034 rplC_gene flipped: 15,68,82,90,118,127,156
πΈ Sticky loop 1029-1032 (4) with 12 candidates
1029 rplC_gene normal: 62,63,123,159,208
1030 rplC_gene normal: 95,97,174,199
1031 rplC_gene flipped: 143,152,194
π Short stem 1046-1205 - 3-pair stem - open loops: π Bump-1 1049
1046 rplC_gene flipped: 63
1046 rplC_gene normal: 137
1047 rplC_gene flipped: 5,193
1047 rplC_gene normal: 23,205
1048 rplC_gene symmetric: 67,134,140
1049 rplC_gene flipped: 31,119,162,196
π Medium stem 1050-1209 - (4-pair stem - open loops: π° Bump-2 1054-1055
1050 rplC_gene flipped: 95,97,174,199
1051 rplC_gene normal: 18,39,103,108,131,176,181,200
1051 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1052 rplC_gene flipped: 31,119,162,196
1053 rplC_gene normal: 13,46,59,77,128,169
1055 rplC_gene normal: 45
π° Bump-2 1054-1055 with 12 candidates
1054 rplC_gene flipped: 1,11,161,165
1054 rplC_gene normal: 24,26,73,92,109,170,177,178
π Medium stem 1056-1211 - (6-pair stem - open loops: π Bump-1 1062, π Bump-1 1194, π Bump-1 1196, π± Sticky-3 1200-1202
1056 rplC_gene normal: 5,193
1056 rplC_gene flipped: 23,205
1057 rplC_gene normal: 143,152,194
1058 rplC_gene flipped: 95,97,174,199
1059 rplC_gene normal: 18,39,103,108,131,176,181,200
1059 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1060 rplC_gene symmetric: 16,21,113,139,145
1061 rplC_gene flipped: 18,39,103,108,131,176,181,200
1061 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1062 rplC_gene normal: 95,97,174,199
1195 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1195 rplC_gene flipped: 138
1196 rplC_gene normal: 15,68,82,90,118,127,156
1197 rplC_gene flipped: 35,91,110,133,151
1198 rplC_gene flipped: 18,39,103,108,131,176,181,200
1198 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1203 rplC_gene flipped: 1,11,161,165
1203 rplC_gene normal: 24,26,73,92,109,170,177,178
1204 rplC_gene normal: 45
1205 rplC_gene normal: 5,193
1205 rplC_gene flipped: 23,205
π± Sticky-3 1200-1202 with 13 candidates
1200 rplC_gene flipped: 1,11,161,165
1200 rplC_gene normal: 24,26,73,92,109,170,177,178
1201 rplC_gene flipped: 43
π Short stem 1063-1193 - 2-pair stem - open loops: π± Sticky-3 1065-1067, πΈ Sticky five 1108-1112, πΈ Sticky loop 1188-1191 (4)
1063 rplC_gene normal: 31,119,162,196
1064 rplC_gene flipped: 18,39,103,108,131,176,181,200
1064 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1067 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1191 rplC_gene flipped: 13,46,59,77,128,169
1192 rplC_gene normal: 31,119,162,196
1193 rplC_gene flipped: 18,39,103,108,131,176,181,200
1193 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
π± Sticky-3 1065-1067 with 10 candidates
1066 rplC_gene normal: 5,193
1066 rplC_gene flipped: 40,79,84,100,186,187,188,201
πΈ Sticky five 1108-1112 with 52 candidates
1108 rplC_gene normal: 13,46,59,77,128,169
1109 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1109 rplC_gene flipped: 138
1110 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1110 rplC_gene normal: 138
1111 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1111 rplC_gene normal: 137
πΈ Sticky loop 1188-1191 (4) with 16 candidates
1188 rplC_gene normal: 45
1189 rplC_gene normal: 35,91,110,133,151
1190 rplC_gene flipped: 5,193
1190 rplC_gene normal: 40,79,84,100,186,187,188,201
βοΈ Belt 1068-1107 - (9-pair stem - open loops: πΈ Sticky loop 1077-1080 (4), π° Bump-2 1084-1085, π° Bump-2 1100-1101)
1068 rplC_gene flipped: 95,97,174,199
1069 rplC_gene symmetric: 89,183
1070 rplC_gene normal: 95,97,174,199
1071 rplC_gene normal: 31,119,162,196
1072 rplC_gene symmetric: 67,134,140
1073 rplC_gene symmetric: 16,21,113,139,145
1074 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1074 rplC_gene normal: 138
1075 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1075 rplC_gene flipped: 138
1076 rplC_gene symmetric: 16,21,113,139,145
1081 rplC_gene normal: 4
1082 rplC_gene normal: 45
1083 rplC_gene symmetric: 16,21,113,139,145
1085 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1085 rplC_gene flipped: 138
1101 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1101 rplC_gene normal: 138
1102 rplC_gene flipped: 13,46,59,77,128,169
1103 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1105 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1106 rplC_gene symmetric: 33,83,124,141,179,184
1107 rplC_gene symmetric: 209
πΈ Sticky loop 1077-1080 (4) with 15 candidates
1077 rplC_gene symmetric: 67,134,140
1078 rplC_gene normal: 35,91,110,133,151
1079 rplC_gene flipped: 15,68,82,90,118,127,156
π° Bump-2 1084-1085 with 22 candidates
1084 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1084 rplC_gene normal: 138
π° Bump-2 1100-1101 with 14 candidates
1100 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1100 rplC_gene flipped: 138
π Medium stem 1086-1099 - (4-pair stem - open loops: πΈ Sticky loop 1090-1095 (6)
1086 rplC_gene normal: 5,193
1086 rplC_gene flipped: 23,205
1088 rplC_gene flipped: 5,193
1088 rplC_gene normal: 23,205
1089 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1089 rplC_gene normal: 138
1095 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1095 rplC_gene flipped: 15,68,82,90,118,127,156
1097 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1098 rplC_gene symmetric: 209
1099 rplC_gene normal: 13,46,59,77,128,169
πΈ Sticky loop 1090-1095 (6) with 31 candidates
1091 rplC_gene flipped: 4
1092 rplC_gene normal: 15,68,82,90,118,127,156
1093 rplC_gene flipped: 35,91,110,133,151
1094 rplC_gene flipped: 18,39,103,108,131,176,181,200
1094 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
βοΈ Belt 1113-1187 - (12-pair stem - open loops: π Bump-1 1125, π° Bump-2 1147-1148, π° Bump-2 1156-1157, π Bump-1 1182)
1113 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1113 rplC_gene normal: 15,68,82,90,118,127,156
1114 rplC_gene flipped: 62,63,123,159,208
1117 rplC_gene flipped: 43
1118 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1118 rplC_gene flipped: 15,68,82,90,118,127,156
1119 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1119 rplC_gene normal: 15,68,82,90,118,127,156
1120 rplC_gene flipped: 62,63,123,159,208
1122 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1122 rplC_gene flipped: 138
1123 rplC_gene symmetric: 16,21,113,139,145
1124 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1124 rplC_gene normal: 138
1125 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1125 rplC_gene flipped: 138
1149 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1149 rplC_gene flipped: 138
1151 rplC_gene normal: 15,68,82,90,118,127,156
1152 rplC_gene flipped: 63
1152 rplC_gene normal: 137
1153 rplC_gene normal: 63
1153 rplC_gene flipped: 137
1155 rplC_gene symmetric: 21,113,139,145
1182 rplC_gene symmetric: 67,134,140
1183 rplC_gene normal: 5,193
1183 rplC_gene flipped: 23,205
1186 rplC_gene normal: 63
1186 rplC_gene flipped: 137
π° Bump-2 1147-1148 with 2 candidates
1147 rplC_gene symmetric: 89,183
π° Bump-2 1156-1157 with 10 candidates
1156 rplC_gene flipped: 5,193
1156 rplC_gene normal: 40,79,84,100,186,187,188,201
π Short stem 1126-1146 - 1-pair stem - open loops: π Bump-1 1127, π Bump-1 1145
1126 rplC_gene flipped: 31,119,162,196
1127 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1143 rplC_gene normal: 63
1143 rplC_gene flipped: 137
1144 rplC_gene flipped: 15,68,82,90,118,127,156
1145 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1145 rplC_gene normal: 138
π Short stem 1128-1141 - 2-pair stem - open loops: π° Bump-2 1130-1131
1128 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1128 rplC_gene flipped: 137
1129 rplC_gene normal: 5,193
1129 rplC_gene flipped: 40,79,84,100,186,187,188,201
1131 rplC_gene symmetric: 33,83,124,141,179,184
π° Bump-2 1130-1131 with 14 candidates
1130 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 1132-1144 - 3-pair stem - open loops: πΈ Sticky five 1135-1139
1132 rplC_gene flipped: 143,152,194
1133 rplC_gene flipped: 5,193
1133 rplC_gene normal: 23,205
1134 rplC_gene flipped: 18,39,103,108,131,176,181,200
1134 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1139 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1140 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1141 rplC_gene flipped: 143,152,194
πΈ Sticky five 1135-1139 with 32 candidates
1135 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1135 rplC_gene flipped: 15,68,82,90,118,127,156
1136 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1137 rplC_gene flipped: 143,152,194
1138 rplC_gene normal: 143,152,194
π Short stem 1158-1181 - 1-pair stem - open loops: π° Bump-2 1159-1160, πΈ Sticky five 1176-1180
1158 rplC_gene normal: 18,39,103,108,131,176,181,200
1158 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1160 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1180 rplC_gene flipped: 63
1180 rplC_gene normal: 137
1181 rplC_gene flipped: 5,193
1181 rplC_gene normal: 23,205
π° Bump-2 1159-1160 with 4 candidates
1159 rplC_gene flipped: 31,119,162,196
πΈ Sticky five 1176-1180 with 18 candidates
1176 rplC_gene flipped: 63
1176 rplC_gene normal: 137
1177 rplC_gene normal: 63
1177 rplC_gene flipped: 137
1178 rplC_gene flipped: 15,68,82,90,118,127,156
1179 rplC_gene normal: 15,68,82,90,118,127,156
π Medium stem 1161-1175 - (5-pair stem - open loops: πΈ Sticky five 1166-1170
1161 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1161 rplC_gene flipped: 137
1162 rplC_gene normal: 5,193
1162 rplC_gene flipped: 40,79,84,100,186,187,188,201
1163 rplC_gene flipped: 35,91,110,133,151
1164 rplC_gene symmetric: 67,134,140
1165 rplC_gene normal: 35,91,110,133,151
1170 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1170 rplC_gene normal: 138
1172 rplC_gene normal: 18,39,103,108,131,176,181,200
1172 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1173 rplC_gene normal: 5,193
1173 rplC_gene flipped: 23,205
1174 rplC_gene normal: 63
1174 rplC_gene flipped: 137
πΈ Sticky five 1166-1170 with 1 candidates
1168 rplC_gene flipped: 4
π Short stem 1237-1337 - 2-pair stem - open loops: π° Bump-2 1239-1240, πΈ Sticky loop 1297-1300 (4), π Bump-1 1302, π° Bump-2 1335-1336
1237 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1237 rplC_gene flipped: 138
1238 rplC_gene normal: 4
1240 rplC_gene normal: 5,193
1240 rplC_gene flipped: 23,205
1300 rplC_gene flipped: 18,39,103,108,131,176,181,200
1300 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1301 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1301 rplC_gene flipped: 15,68,82,90,118,127,156
1302 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1336 rplC_gene flipped: 143,152,194
1337 rplC_gene normal: 63
1337 rplC_gene flipped: 137
π° Bump-2 1239-1240 with 1 candidates
1239 rplC_gene normal: 45
πΈ Sticky loop 1297-1300 (4) with 6 candidates
1297 rplC_gene flipped: 45
1299 rplC_gene flipped: 35,91,110,133,151
π° Bump-2 1335-1336 with 4 candidates
1335 rplC_gene normal: 95,97,174,199
βοΈ Belt 1241-1296 - (7-pair stem - open loops: πΈ Sticky five 1248-1252, πΈ Sticky five 1285-1289)
1241 rplC_gene normal: 143,152,194
1242 rplC_gene symmetric: 33,83,124,141,179,184
1243 rplC_gene symmetric: 209
1244 rplC_gene normal: 13,46,59,77,128,169
1245 rplC_gene flipped: 1,11,161,165
1245 rplC_gene normal: 24,26,73,92,109,170,177,178
1247 rplC_gene normal: 1,11,161,165
1247 rplC_gene flipped: 24,26,73,92,109,170,177,178
1252 rplC_gene symmetric: 21,113,139,145
1289 rplC_gene flipped: 35,91,110,133,151
1290 rplC_gene symmetric: 67,134,140
1291 rplC_gene flipped: 31,119,162,196
1292 rplC_gene symmetric: 33,83,124,141,179,184
1293 rplC_gene normal: 31,119,162,196
1294 rplC_gene flipped: 18,39,103,108,131,176,181,200
1294 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1295 rplC_gene normal: 95,97,174,199
1296 rplC_gene normal: 31,119,162,196
πΈ Sticky five 1248-1252 with 21 candidates
1249 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1249 rplC_gene flipped: 138
1251 rplC_gene normal: 15,68,82,90,118,127,156
πΈ Sticky five 1285-1289 with 8 candidates
1286 rplC_gene flipped: 4
1288 rplC_gene normal: 15,68,82,90,118,127,156
π Short stem 1253-1284 - 3-pair stem - open loops: π° Bump-2 1256-1257, πΈ Sticky loop 1278-1281 (4)
1254 rplC_gene symmetric: 21,113,139,145
1255 rplC_gene flipped: 15,68,82,90,118,127,156
1257 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1281 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1281 rplC_gene normal: 15,68,82,90,118,127,156
1282 rplC_gene symmetric: 89,183
1284 rplC_gene flipped: 1,11,161,165
1284 rplC_gene normal: 24,26,73,92,109,170,177,178
π° Bump-2 1256-1257 with 7 candidates
1256 rplC_gene normal: 15,68,82,90,118,127,156
πΈ Sticky loop 1278-1281 (4) with 30 candidates
1278 rplC_gene normal: 63
1278 rplC_gene flipped: 137
1279 rplC_gene flipped: 5,193
1279 rplC_gene normal: 40,79,84,100,186,187,188,201
1280 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1280 rplC_gene normal: 137
π Short stem 1258-1277 - 2-pair stem - open loops: π± Sticky-3 1260-1262, π± Sticky-3 1273-1275
1258 rplC_gene symmetric: 33,83,124,141,179,184
1259 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1262 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1262 rplC_gene normal: 15,68,82,90,118,127,156
1275 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1276 rplC_gene symmetric: 33,83,124,141,179,184
1277 rplC_gene flipped: 143,152,194
π± Sticky-3 1260-1262 with 28 candidates
1260 rplC_gene flipped: 5,193
1260 rplC_gene normal: 40,79,84,100,186,187,188,201
1261 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1261 rplC_gene normal: 137
π± Sticky-3 1273-1275 with 21 candidates
1273 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1273 rplC_gene flipped: 138
1274 rplC_gene normal: 15,68,82,90,118,127,156
π Short stem 1263-1272 - 3-pair stem - open loops: πΈ Sticky loop 1266-1269 (4)
1263 rplC_gene symmetric: 89,183
1264 rplC_gene normal: 95,97,174,199
1265 rplC_gene symmetric: 209
1269 rplC_gene symmetric: 21,113,139,145
1271 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1272 rplC_gene normal: 13,46,59,77,128,169
πΈ Sticky loop 1266-1269 (4) with 20 candidates
1266 rplC_gene symmetric: 33,83,124,141,179,184
1267 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 1303-1334 - 1-pair stem - open loops: πΈ Sticky loop 1304-1307 (4), πΈ Sticky loop 1330-1333 (4)
1303 rplC_gene flipped: 143,152,194
1307 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1307 rplC_gene flipped: 138
1333 rplC_gene flipped: 35,91,110,133,151
1334 rplC_gene flipped: 18,39,103,108,131,176,181,200
1334 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
πΈ Sticky loop 1304-1307 (4) with 2 candidates
1304 rplC_gene normal: 63
1304 rplC_gene flipped: 137
πΈ Sticky loop 1330-1333 (4) with 19 candidates
1330 rplC_gene normal: 35,91,110,133,151
1331 rplC_gene flipped: 15,68,82,90,118,127,156
1332 rplC_gene normal: 15,68,82,90,118,127,156
βοΈ Belt 1308-1329 - (7-pair stem - open loops: πΈ Sticky loop 1315-1322 (8))
1308 rplC_gene normal: 5,193
1308 rplC_gene flipped: 23,205
1309 rplC_gene normal: 63
1309 rplC_gene flipped: 137
1311 rplC_gene flipped: 35,91,110,133,151
1312 rplC_gene flipped: 18,39,103,108,131,176,181,200
1312 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1314 rplC_gene normal: 18,39,103,108,131,176,181,200
1314 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1322 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1323 rplC_gene flipped: 5,193
1323 rplC_gene normal: 40,79,84,100,186,187,188,201
1325 rplC_gene symmetric: 89,183
1326 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1326 rplC_gene flipped: 15,68,82,90,118,127,156
1327 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1327 rplC_gene flipped: 137
1328 rplC_gene flipped: 1,11,161,165
1328 rplC_gene normal: 24,26,73,92,109,170,177,178
1329 rplC_gene normal: 45
πΈ Sticky loop 1315-1322 (8) with 44 candidates
1315 rplC_gene flipped: 31,119,162,196
1316 rplC_gene normal: 13,46,59,77,128,169
1317 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1317 rplC_gene flipped: 138
1318 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1318 rplC_gene normal: 138
1320 rplC_gene symmetric: 89,183
1321 rplC_gene normal: 95,97,174,199
π Short stem 1348-1374 - 1-pair stem - open loops: π Bump-1 1349, π Bump-1 1373
1348 rplC_gene flipped: 4
1349 rplC_gene normal: 4
1373 rplC_gene flipped: 15,68,82,90,118,127,156
1374 rplC_gene normal: 4
βοΈ Belt 1350-1372 - (7-pair stem - open loops: πΈ Sticky loop 1357-1365 (9))
1350 rplC_gene flipped: 43
1351 rplC_gene normal: 95,97,174,199
1352 rplC_gene normal: 31,119,162,196
1353 rplC_gene symmetric: 67,134,140
1354 rplC_gene normal: 5,193
1354 rplC_gene flipped: 23,205
1355 rplC_gene normal: 63
1355 rplC_gene flipped: 137
1365 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1366 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1366 rplC_gene flipped: 137
1367 rplC_gene symmetric: 9,50,60,155,207
1368 rplC_gene flipped: 13,46,59,77,128,169
1369 rplC_gene flipped: 143,152,194
1370 rplC_gene flipped: 5,193
1370 rplC_gene normal: 23,205
1371 rplC_gene symmetric: 67,134,140
1372 rplC_gene normal: 35,91,110,133,151
πΈ Sticky loop 1357-1365 (9) with 28 candidates
1357 rplC_gene flipped: 43
1359 rplC_gene normal: 5,193
1359 rplC_gene flipped: 40,79,84,100,186,187,188,201
1360 rplC_gene symmetric: 21,113,139,145
1361 rplC_gene flipped: 15,68,82,90,118,127,156
1362 rplC_gene normal: 4
1363 rplC_gene normal: 45
1364 rplC_gene flipped: 31,119,162,196
π Short stem 1401-1501 - 1-pair stem - open loops: π° Bump-2 1402-1403, π± Sticky-3 1498-1500
1401 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1403 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1501 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1501 rplC_gene flipped: 138
π± Sticky-3 1498-1500 with 15 candidates
1498 rplC_gene flipped: 4
1499 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1499 rplC_gene normal: 138
π Short stem 1404-1497 - 2-pair stem - open loops: π Bump-1 1406, π Bump-1 1495
1404 rplC_gene normal: 31,119,162,196
1405 rplC_gene flipped: 18,39,103,108,131,176,181,200
1405 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1495 rplC_gene normal: 95,97,174,199
1496 rplC_gene normal: 31,119,162,196
1497 rplC_gene flipped: 45
π Short stem 1407-1494 - 1-pair stem - open loops: π Bump-1 1408, π° Bump-2 1492-1493
1407 rplC_gene symmetric: 9,50,60,155,207
1493 rplC_gene flipped: 35,91,110,133,151
1494 rplC_gene flipped: 18,39,103,108,131,176,181,200
1494 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
π° Bump-2 1492-1493 with 7 candidates
1492 rplC_gene normal: 15,68,82,90,118,127,156
π Medium stem 1409-1491 - (4-pair stem - open loops: π Bump-1 1413, π Bump-1 1487
1409 rplC_gene symmetric: 9,50,60,155,207
1410 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1410 rplC_gene normal: 137
1411 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1411 rplC_gene flipped: 137
1412 rplC_gene flipped: 1,11,161,165
1412 rplC_gene normal: 24,26,73,92,109,170,177,178
1413 rplC_gene normal: 45
1488 rplC_gene flipped: 5,193
1488 rplC_gene normal: 23,205
1489 rplC_gene symmetric: 67,134,140
1490 rplC_gene normal: 35,91,110,133,151
1491 rplC_gene flipped: 15,68,82,90,118,127,156
π Short stem 1414-1486 - 3-pair stem - open loops: π° Bump-2 1417-1418, π° Bump-2 1482-1483
1414 rplC_gene normal: 5,193
1414 rplC_gene flipped: 23,205
1416 rplC_gene normal: 63
1416 rplC_gene flipped: 137
1418 rplC_gene flipped: 35,91,110,133,151
1484 rplC_gene normal: 18,39,103,108,131,176,181,200
1484 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1485 rplC_gene normal: 5,193
1485 rplC_gene flipped: 23,205
π° Bump-2 1482-1483 with 10 candidates
1482 rplC_gene flipped: 5,193
1482 rplC_gene normal: 40,79,84,100,186,187,188,201
βοΈ Belt 1419-1481 - (12-pair stem - open loops: πΈ Sticky loop 1431-1434 (4), π± Sticky-3 1467-1469)
1419 rplC_gene symmetric: 67,134,140
1420 rplC_gene normal: 5,193
1420 rplC_gene flipped: 23,205
1422 rplC_gene flipped: 5,193
1422 rplC_gene normal: 23,205
1423 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1423 rplC_gene normal: 138
1424 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1424 rplC_gene flipped: 138
1425 rplC_gene flipped: 31,119,162,196
1426 rplC_gene normal: 13,46,59,77,128,169
1427 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1427 rplC_gene flipped: 138
1430 rplC_gene normal: 15,68,82,90,118,127,156
1434 rplC_gene flipped: 35,91,110,133,151
1464 rplC_gene normal: 1,11,161,165
1464 rplC_gene flipped: 24,26,73,92,109,170,177,178
1465 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1465 rplC_gene normal: 137
1466 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1466 rplC_gene flipped: 137
1469 rplC_gene flipped: 62,63,123,159,208
1471 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1471 rplC_gene flipped: 138
1472 rplC_gene symmetric: 16,21,113,139,145
1473 rplC_gene symmetric: 67,134,140
1474 rplC_gene normal: 35,91,110,133,151
1477 rplC_gene normal: 62,63,123,159,208
1479 rplC_gene flipped: 1,11,161,165
1479 rplC_gene normal: 24,26,73,92,109,170,177,178
1480 rplC_gene normal: 45
1481 rplC_gene normal: 35,91,110,133,151
πΈ Sticky loop 1431-1434 (4) with 18 candidates
1431 rplC_gene symmetric: 21,113,139,145
1432 rplC_gene flipped: 15,68,82,90,118,127,156
1433 rplC_gene normal: 15,68,82,90,118,127,156
π± Sticky-3 1467-1469 with 5 candidates
1467 rplC_gene symmetric: 9,50,60,155,207
π Medium stem 1435-1462 - (6-pair stem - open loops: π Bump-1 1441
1435 rplC_gene flipped: 45
1437 rplC_gene flipped: 63
1437 rplC_gene normal: 137
1438 rplC_gene flipped: 5,193
1438 rplC_gene normal: 23,205
1439 rplC_gene flipped: 45
1441 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Medium stem 1442-1466 - (4-pair stem - open loops: π° Bump-2 1446-1447, π Bump-1 1456
1442 rplC_gene flipped: 95,97,174,199
1443 rplC_gene flipped: 62,63,123,159,208
1445 rplC_gene flipped: 4
1447 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1447 rplC_gene normal: 137
1456 rplC_gene flipped: 63
1456 rplC_gene normal: 137
1458 rplC_gene normal: 143,152,194
1459 rplC_gene symmetric: 33,83,124,141,179,184
1460 rplC_gene symmetric: 209
1461 rplC_gene flipped: 95,97,174,199
1462 rplC_gene flipped: 62,63,123,159,208
π° Bump-2 1446-1447 with 14 candidates
1446 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1446 rplC_gene normal: 138
π Short stem 1448-1455 - 2-pair stem - open loops: πΈ Sticky loop 1450-1453 (4)
1448 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1448 rplC_gene normal: 15,68,82,90,118,127,156
1449 rplC_gene flipped: 62,63,123,159,208
1454 rplC_gene normal: 63
1454 rplC_gene flipped: 137
πΈ Sticky loop 1450-1453 (4) with 12 candidates
1450 rplC_gene normal: 62,63,123,159,208
1451 rplC_gene normal: 95,97,174,199
1452 rplC_gene flipped: 143,152,194
βοΈ Belt 1506-1529 - (10-pair stem - open loops: πΈ Sticky loop 1516-1519 (4))
1506 rplC_gene flipped: 4
1507 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1507 rplC_gene normal: 138
1508 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1508 rplC_gene normal: 137
1509 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1510 rplC_gene normal: 31,119,162,196
1511 rplC_gene flipped: 45
1513 rplC_gene flipped: 63
1513 rplC_gene normal: 137
1519 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1519 rplC_gene normal: 137
1520 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1520 rplC_gene normal: 15,68,82,90,118,127,156
1521 rplC_gene normal: 18,39,103,108,131,176,181,200
1521 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1522 rplC_gene flipped: 31,119,162,196
1523 rplC_gene symmetric: 33,83,124,141,179,184
1524 rplC_gene flipped: 143,152,194
1525 rplC_gene flipped: 5,193
1525 rplC_gene normal: 23,205
1526 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1526 rplC_gene normal: 138
1527 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1527 rplC_gene flipped: 138
1528 rplC_gene normal: 5,193
1528 rplC_gene flipped: 23,205
1529 rplC_gene normal: 63
1529 rplC_gene flipped: 137
πΈ Sticky loop 1516-1519 (4) with 23 candidates
1516 rplC_gene normal: 63
1516 rplC_gene flipped: 137
1517 rplC_gene flipped: 15,68,82,90,118,127,156
1518 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1518 rplC_gene normal: 138
============================================================
π JOURNEY SUMMARY:
π Bridge structures (stem pairs): 105
π Terminal stations (loops): 204
ποΈ Longest bridge: 12 base pairs
π Largest terminal: 13 nucleotides
π― POTENTIAL BINDING HOTSPOTS:
π Look for terminals >10 nt (protein landing zones)
π Check bulges 1-3 nt (fine-tuning sites)
π Monitor bridge intersections (assembly checkpoints)
𧬠RNA rrlB_gene (2933 nucleotides)
============================================================
π The RNA landscape...
πΈ Sticky loop 1-9 (9), π Sticky hub 2914-2933 (20)
βοΈ Belt 10-2913 - (8-pair stem - open loops: πΈ Sticky loop 18-23 (6), πΈ Sticky loop 535-541 (7), π° Bump-2 570-571, πΈ Sticky five 2029-2033, π° Bump-2 2052-2053, πΈ Sticky loop 2637-2640 (4), π° Bump-2 2800-2801, πΈ Sticky five 2817-2821, πΈ Sticky five 2901-2905)
11 rplC_gene normal: 43
12 rplC_gene flipped: 4
13 rplC_gene normal: 15,68,82,90,118,127,156
14 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
15 rplC_gene symmetric: 33,83,124,141,179,184
16 rplC_gene normal: 31,119,162,196
17 rplC_gene flipped: 45
23 rplC_gene flipped: 5,193
23 rplC_gene normal: 23,205
541 rplC_gene flipped: 13,46,59,77,128,169
2021 rplC_gene symmetric: 89,183
2022 rplC_gene normal: 95,97,174,199
2023 rplC_gene symmetric: 209
2024 rplC_gene flipped: 95,97,174,199
2025 rplC_gene normal: 18,39,103,108,131,176,181,200
2025 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2026 rplC_gene symmetric: 16,21,113,139,145
2027 rplC_gene symmetric: 67,134,140
2028 rplC_gene normal: 35,91,110,133,151
2033 rplC_gene normal: 45
2053 rplC_gene flipped: 5,193
2053 rplC_gene normal: 40,79,84,100,186,187,188,201
2634 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2634 rplC_gene normal: 138
2636 rplC_gene normal: 18,39,103,108,131,176,181,200
2636 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2821 rplC_gene symmetric: 21,113,139,145
πΈ Sticky loop 18-23 (6) with 26 candidates
18 rplC_gene normal: 1,11,161,165
18 rplC_gene flipped: 24,26,73,92,109,170,177,178
20 rplC_gene symmetric: 9,50,60,155,207
21 rplC_gene flipped: 13,46,59,77,128,169
22 rplC_gene flipped: 143,152,194
πΈ Sticky loop 535-541 (7) with 27 candidates
536 rplC_gene normal: 63
536 rplC_gene flipped: 137
538 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
539 rplC_gene normal: 13,46,59,77,128,169
540 rplC_gene symmetric: 9,50,60,155,207
π° Bump-2 570-571 with 1 candidates
570 rplC_gene flipped: 45
πΈ Sticky five 2029-2033 with 18 candidates
2029 rplC_gene flipped: 15,68,82,90,118,127,156
2030 rplC_gene normal: 15,68,82,90,118,127,156
2031 rplC_gene symmetric: 21,113,139,145
π° Bump-2 2052-2053 with 4 candidates
2052 rplC_gene symmetric: 21,113,139,145
πΈ Sticky loop 2637-2640 (4) with 7 candidates
2637 rplC_gene normal: 35,91,110,133,151
2639 rplC_gene flipped: 63
2639 rplC_gene normal: 137
π° Bump-2 2800-2801 with 2 candidates
2800 rplC_gene flipped: 63
2800 rplC_gene normal: 137
πΈ Sticky five 2817-2821 with 41 candidates
2817 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2817 rplC_gene flipped: 138
2818 rplC_gene normal: 35,91,110,133,151
2819 rplC_gene flipped: 15,68,82,90,118,127,156
2820 rplC_gene normal: 15,68,82,90,118,127,156
πΈ Sticky five 2901-2905 with 22 candidates
2901 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2901 rplC_gene normal: 15,68,82,90,118,127,156
2902 rplC_gene flipped: 62,63,123,159,208
βοΈ Belt 24-534 - (10-pair stem - open loops: πΈ Sticky loop 34-37 (4), πΈ Sticky loop 521-524 (4))
24 rplC_gene symmetric: 67,134,140
25 rplC_gene normal: 5,193
25 rplC_gene flipped: 23,205
26 rplC_gene normal: 63
26 rplC_gene flipped: 137
28 rplC_gene normal: 45
29 rplC_gene flipped: 31,119,162,196
30 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
32 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
32 rplC_gene normal: 15,68,82,90,118,127,156
33 rplC_gene normal: 18,39,103,108,131,176,181,200
33 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
37 rplC_gene normal: 5,193
37 rplC_gene flipped: 40,79,84,100,186,187,188,201
524 rplC_gene flipped: 45
525 rplC_gene normal: 1,11,161,165
525 rplC_gene flipped: 24,26,73,92,109,170,177,178
527 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
527 rplC_gene flipped: 138
528 rplC_gene normal: 15,68,82,90,118,127,156
529 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
530 rplC_gene normal: 13,46,59,77,128,169
531 rplC_gene normal: 5,193
531 rplC_gene flipped: 40,79,84,100,186,187,188,201
532 rplC_gene flipped: 35,91,110,133,151
533 rplC_gene symmetric: 67,134,140
534 rplC_gene normal: 5,193
534 rplC_gene flipped: 23,205
πΈ Sticky loop 34-37 (4) with 13 candidates
34 rplC_gene normal: 5,193
34 rplC_gene flipped: 23,205
35 rplC_gene normal: 143,152,194
36 rplC_gene normal: 13,46,59,77,128,169
πΈ Sticky loop 521-524 (4) with 22 candidates
521 rplC_gene normal: 1,11,161,165
521 rplC_gene flipped: 24,26,73,92,109,170,177,178
522 rplC_gene flipped: 13,46,59,77,128,169
523 rplC_gene normal: 31,119,162,196
π Medium stem 38-520 - (4-pair stem - open loops: π° Bump-2 42-43, π Sticky hub 455-469 (15), πΈ Sticky loop 478-481 (4), πΈ Sticky loop 484-492 (9), π Sticky hub 506-518 (13)
38 rplC_gene flipped: 35,91,110,133,151
39 rplC_gene flipped: 18,39,103,108,131,176,181,200
39 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
41 rplC_gene normal: 5,193
41 rplC_gene flipped: 40,79,84,100,186,187,188,201
469 rplC_gene flipped: 15,68,82,90,118,127,156
481 rplC_gene flipped: 15,68,82,90,118,127,156
482 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
482 rplC_gene normal: 138
483 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
483 rplC_gene normal: 137
492 rplC_gene flipped: 63
492 rplC_gene normal: 137
518 rplC_gene symmetric: 67,134,140
519 rplC_gene symmetric: 16,21,113,139,145
520 rplC_gene flipped: 45
π° Bump-2 42-43 with 4 candidates
42 rplC_gene symmetric: 21,113,139,145
π Sticky hub 455-469 (15) with 89 candidates
455 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
455 rplC_gene flipped: 137
456 rplC_gene normal: 5,193
456 rplC_gene flipped: 40,79,84,100,186,187,188,201
457 rplC_gene flipped: 35,91,110,133,151
458 rplC_gene flipped: 45
459 rplC_gene normal: 1,11,161,165
459 rplC_gene flipped: 24,26,73,92,109,170,177,178
460 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
460 rplC_gene normal: 137
461 rplC_gene normal: 19,44,66,72,76,87,111,153,158
462 rplC_gene normal: 31,119,162,196
463 rplC_gene symmetric: 67,134,140
464 rplC_gene normal: 35,91,110,133,151
466 rplC_gene flipped: 63
466 rplC_gene normal: 137
468 rplC_gene normal: 63
468 rplC_gene flipped: 137
πΈ Sticky loop 478-481 (4) with 11 candidates
479 rplC_gene normal: 15,68,82,90,118,127,156
480 rplC_gene symmetric: 21,113,139,145
πΈ Sticky loop 484-492 (9) with 35 candidates
486 rplC_gene normal: 19,44,66,72,76,87,111,153,158
487 rplC_gene flipped: 143,152,194
488 rplC_gene normal: 143,152,194
489 rplC_gene symmetric: 33,83,124,141,179,184
490 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Sticky hub 506-518 (13) with 131 candidates
506 rplC_gene flipped: 15,68,82,90,118,127,156
507 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
507 rplC_gene normal: 138
508 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
508 rplC_gene normal: 137
509 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
509 rplC_gene normal: 15,68,82,90,118,127,156
510 rplC_gene normal: 18,39,103,108,131,176,181,200
510 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
511 rplC_gene normal: 35,91,110,133,151
512 rplC_gene flipped: 15,68,82,90,118,127,156
514 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
514 rplC_gene normal: 138
515 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
515 rplC_gene normal: 137
516 rplC_gene normal: 19,44,66,72,76,87,111,153,158
517 rplC_gene normal: 31,119,162,196
βοΈ Belt 44-454 - (11-pair stem - open loops: πΈ Sticky loop 55-61 (7), π± Sticky-3 127-129, π Bump-1 158, πΈ Sticky loop 186-191 (6), πΈ Sticky loop 224-232 (9), π± Sticky-3 241-243, π° Bump-2 272-273, πΈ Sticky five 437-441, π Bump-1 444, π Bump-1 452)
44 rplC_gene flipped: 63
44 rplC_gene normal: 137
45 rplC_gene normal: 143,152,194
46 rplC_gene symmetric: 33,83,124,141,179,184
47 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
49 rplC_gene normal: 45
50 rplC_gene normal: 35,91,110,133,151
51 rplC_gene flipped: 15,68,82,90,118,127,156
52 rplC_gene normal: 15,68,82,90,118,127,156
53 rplC_gene flipped: 63
53 rplC_gene normal: 137
54 rplC_gene normal: 63
54 rplC_gene flipped: 137
61 rplC_gene normal: 43
129 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
129 rplC_gene flipped: 137
158 rplC_gene normal: 35,91,110,133,151
273 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
441 rplC_gene normal: 35,91,110,133,151
442 rplC_gene flipped: 5,193
442 rplC_gene normal: 40,79,84,100,186,187,188,201
443 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
443 rplC_gene normal: 137
444 rplC_gene normal: 19,44,66,72,76,87,111,153,158
445 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
449 rplC_gene flipped: 35,91,110,133,151
450 rplC_gene symmetric: 67,134,140
451 rplC_gene normal: 35,91,110,133,151
452 rplC_gene flipped: 15,68,82,90,118,127,156
453 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
453 rplC_gene normal: 138
454 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
454 rplC_gene normal: 137
πΈ Sticky loop 55-61 (7) with 31 candidates
55 rplC_gene flipped: 5,193
55 rplC_gene normal: 40,79,84,100,186,187,188,201
56 rplC_gene flipped: 13,46,59,77,128,169
57 rplC_gene normal: 31,119,162,196
58 rplC_gene symmetric: 67,134,140
59 rplC_gene flipped: 31,119,162,196
60 rplC_gene flipped: 95,97,174,199
π± Sticky-3 127-129 with 18 candidates
127 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
127 rplC_gene normal: 137
πΈ Sticky loop 186-191 (6) with 23 candidates
188 rplC_gene normal: 63
188 rplC_gene flipped: 137
189 rplC_gene flipped: 15,68,82,90,118,127,156
190 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
190 rplC_gene normal: 138
πΈ Sticky loop 224-232 (9) with 73 candidates
225 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
225 rplC_gene flipped: 138
226 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
226 rplC_gene normal: 138
227 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
227 rplC_gene normal: 137
228 rplC_gene normal: 19,44,66,72,76,87,111,153,158
229 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
231 rplC_gene symmetric: 21,113,139,145
π± Sticky-3 241-243 with 6 candidates
241 rplC_gene flipped: 35,91,110,133,151
242 rplC_gene flipped: 45
π° Bump-2 272-273 with 14 candidates
272 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky five 437-441 with 33 candidates
437 rplC_gene normal: 35,91,110,133,151
438 rplC_gene flipped: 5,193
438 rplC_gene normal: 40,79,84,100,186,187,188,201
440 rplC_gene normal: 18,39,103,108,131,176,181,200
440 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
βοΈ Belt 62-126 - (8-pair stem - open loops: πΈ Sticky loop 70-75 (6), πΈ Sticky five 80-84, π± Sticky-3 120-122)
62 rplC_gene flipped: 4
63 rplC_gene normal: 4
64 rplC_gene flipped: 43
66 rplC_gene normal: 18,39,103,108,131,176,181,200
66 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
67 rplC_gene flipped: 31,119,162,196
68 rplC_gene symmetric: 33,83,124,141,179,184
69 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
75 rplC_gene symmetric: 33,83,124,141,179,184
76 rplC_gene normal: 31,119,162,196
77 rplC_gene flipped: 18,39,103,108,131,176,181,200
77 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
78 rplC_gene normal: 95,97,174,199
79 rplC_gene flipped: 143,152,194
84 rplC_gene flipped: 63
84 rplC_gene normal: 137
123 rplC_gene normal: 63
123 rplC_gene flipped: 137
124 rplC_gene flipped: 15,68,82,90,118,127,156
126 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
126 rplC_gene normal: 138
πΈ Sticky loop 70-75 (6) with 22 candidates
72 rplC_gene flipped: 4
73 rplC_gene normal: 15,68,82,90,118,127,156
74 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky five 80-84 with 13 candidates
80 rplC_gene flipped: 5,193
80 rplC_gene normal: 23,205
81 rplC_gene flipped: 45
82 rplC_gene flipped: 4
83 rplC_gene normal: 15,68,82,90,118,127,156
π± Sticky-3 120-122 with 4 candidates
120 rplC_gene normal: 5,193
120 rplC_gene flipped: 23,205
βοΈ Belt 85-119 - (7-pair stem - open loops: π° Bump-2 92-93, πΈ Sticky loop 107-112 (6))
85 rplC_gene flipped: 5,193
85 rplC_gene normal: 23,205
86 rplC_gene symmetric: 67,134,140
87 rplC_gene normal: 35,91,110,133,151
91 rplC_gene normal: 45
93 rplC_gene flipped: 15,68,82,90,118,127,156
113 rplC_gene normal: 62,63,123,159,208
114 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
114 rplC_gene flipped: 15,68,82,90,118,127,156
115 rplC_gene normal: 19,44,66,72,76,87,111,153,158
116 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
117 rplC_gene flipped: 15,68,82,90,118,127,156
118 rplC_gene normal: 4
119 rplC_gene normal: 45
π° Bump-2 92-93 with 5 candidates
92 rplC_gene normal: 35,91,110,133,151
πΈ Sticky loop 107-112 (6) with 23 candidates
107 rplC_gene normal: 143,152,194
108 rplC_gene symmetric: 33,83,124,141,179,184
109 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 94-106 - 3-pair stem - open loops: πΈ Sticky loop 97-103 (7)
94 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
94 rplC_gene normal: 138
95 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
95 rplC_gene normal: 137
96 rplC_gene normal: 19,44,66,72,76,87,111,153,158
103 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
103 rplC_gene normal: 138
104 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
104 rplC_gene normal: 137
105 rplC_gene normal: 19,44,66,72,76,87,111,153,158
106 rplC_gene flipped: 143,152,194
πΈ Sticky loop 97-103 (7) with 27 candidates
97 rplC_gene normal: 31,119,162,196
98 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
98 rplC_gene normal: 138
102 rplC_gene flipped: 4
π Short stem 130-139 - 3-pair stem - open loops: πΈ Sticky loop 133-136 (4)
130 rplC_gene normal: 5,193
130 rplC_gene flipped: 40,79,84,100,186,187,188,201
131 rplC_gene flipped: 35,91,110,133,151
132 rplC_gene symmetric: 67,134,140
136 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
136 rplC_gene normal: 138
138 rplC_gene normal: 62,63,123,159,208
139 rplC_gene normal: 95,97,174,199
πΈ Sticky loop 133-136 (4) with 13 candidates
133 rplC_gene symmetric: 16,21,113,139,145
134 rplC_gene symmetric: 67,134,140
135 rplC_gene symmetric: 16,21,113,139,145
βοΈ Belt 140-157 - (7-pair stem - open loops: πΈ Sticky loop 147-150 (4))
140 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
141 rplC_gene flipped: 5,193
141 rplC_gene normal: 40,79,84,100,186,187,188,201
143 rplC_gene symmetric: 9,50,60,155,207
145 rplC_gene symmetric: 9,50,60,155,207
151 rplC_gene flipped: 1,11,161,165
151 rplC_gene normal: 24,26,73,92,109,170,177,178
154 rplC_gene flipped: 4
155 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
155 rplC_gene normal: 138
157 rplC_gene normal: 18,39,103,108,131,176,181,200
157 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
πΈ Sticky loop 147-150 (4) with 2 candidates
147 rplC_gene normal: 43
149 rplC_gene flipped: 43
βοΈ Belt 159-185 - (9-pair stem - open loops: πΈ Sticky loop 168-176 (9))
159 rplC_gene flipped: 15,68,82,90,118,127,156
160 rplC_gene normal: 4
161 rplC_gene flipped: 43
162 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
162 rplC_gene flipped: 15,68,82,90,118,127,156
163 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
163 rplC_gene flipped: 137
164 rplC_gene flipped: 1,11,161,165
164 rplC_gene normal: 24,26,73,92,109,170,177,178
167 rplC_gene flipped: 63
167 rplC_gene normal: 137
176 rplC_gene flipped: 63
176 rplC_gene normal: 137
177 rplC_gene normal: 143,152,194
178 rplC_gene symmetric: 33,83,124,141,179,184
179 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
180 rplC_gene flipped: 15,68,82,90,118,127,156
181 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
181 rplC_gene normal: 138
182 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
182 rplC_gene normal: 137
183 rplC_gene normal: 19,44,66,72,76,87,111,153,158
184 rplC_gene flipped: 143,152,194
πΈ Sticky loop 168-176 (9) with 34 candidates
168 rplC_gene flipped: 5,193
168 rplC_gene normal: 23,205
169 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
169 rplC_gene normal: 138
171 rplC_gene flipped: 4
172 rplC_gene normal: 4
173 rplC_gene normal: 45
174 rplC_gene normal: 35,91,110,133,151
π Medium stem 192-223 - (6-pair stem - open loops: π° Bump-2 198-199, π Bump-1 216, π Bump-1 222
192 rplC_gene normal: 18,39,103,108,131,176,181,200
192 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
193 rplC_gene normal: 35,91,110,133,151
194 rplC_gene flipped: 15,68,82,90,118,127,156
196 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
196 rplC_gene normal: 138
199 rplC_gene flipped: 43
218 rplC_gene normal: 15,68,82,90,118,127,156
219 rplC_gene symmetric: 21,113,139,145
220 rplC_gene flipped: 15,68,82,90,118,127,156
222 rplC_gene normal: 4
223 rplC_gene flipped: 43
π° Bump-2 198-199 with 12 candidates
198 rplC_gene flipped: 1,11,161,165
198 rplC_gene normal: 24,26,73,92,109,170,177,178
π Medium stem 200-215 - (5-pair stem - open loops: πΈ Sticky loop 205-208 (4), π° Bump-2 211-212
201 rplC_gene normal: 43
202 rplC_gene flipped: 4
203 rplC_gene normal: 15,68,82,90,118,127,156
204 rplC_gene flipped: 35,91,110,133,151
210 rplC_gene normal: 19,44,66,72,76,87,111,153,158
213 rplC_gene flipped: 63
213 rplC_gene normal: 137
214 rplC_gene normal: 63
214 rplC_gene flipped: 137
215 rplC_gene flipped: 15,68,82,90,118,127,156
πΈ Sticky loop 205-208 (4) with 31 candidates
205 rplC_gene flipped: 45
206 rplC_gene normal: 1,11,161,165
206 rplC_gene flipped: 24,26,73,92,109,170,177,178
207 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
207 rplC_gene normal: 137
π° Bump-2 211-212 with 14 candidates
211 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 233-240 - 2-pair stem - open loops: πΈ Sticky loop 235-238 (4)
234 rplC_gene normal: 62,63,123,159,208
239 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
239 rplC_gene flipped: 137
240 rplC_gene normal: 5,193
240 rplC_gene flipped: 40,79,84,100,186,187,188,201
πΈ Sticky loop 235-238 (4) with 17 candidates
235 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
235 rplC_gene flipped: 15,68,82,90,118,127,156
π Medium stem 244-271 - (5-pair stem - open loops: πΈ Sticky five 249-253, πΈ Sticky loop 263-266 (4)
244 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
245 rplC_gene symmetric: 33,83,124,141,179,184
246 rplC_gene flipped: 143,152,194
247 rplC_gene normal: 143,152,194
248 rplC_gene symmetric: 33,83,124,141,179,184
253 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
266 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
268 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
268 rplC_gene flipped: 137
269 rplC_gene normal: 5,193
269 rplC_gene flipped: 40,79,84,100,186,187,188,201
270 rplC_gene symmetric: 21,113,139,145
πΈ Sticky five 249-253 with 34 candidates
249 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
251 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
252 rplC_gene symmetric: 33,83,124,141,179,184
πΈ Sticky loop 263-266 (4) with 30 candidates
263 rplC_gene normal: 13,46,59,77,128,169
264 rplC_gene normal: 5,193
264 rplC_gene flipped: 40,79,84,100,186,187,188,201
265 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 254-262 - 2-pair stem - open loops: πΈ Sticky five 256-260
254 rplC_gene flipped: 15,68,82,90,118,127,156
255 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
255 rplC_gene normal: 138
260 rplC_gene normal: 63
260 rplC_gene flipped: 137
262 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky five 256-260 with 9 candidates
256 rplC_gene flipped: 13,46,59,77,128,169
257 rplC_gene flipped: 143,152,194
π Medium stem 274-436 - (4-pair stem - open loops: π° Bump-2 278-279, πΈ Sticky loop 376-383 (8), πΈ Sticky loop 409-414 (6), π° Bump-2 431-432
274 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
274 rplC_gene normal: 15,68,82,90,118,127,156
275 rplC_gene normal: 18,39,103,108,131,176,181,200
275 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
276 rplC_gene normal: 35,91,110,133,151
277 rplC_gene flipped: 15,68,82,90,118,127,156
279 rplC_gene flipped: 43
383 rplC_gene symmetric: 9,50,60,155,207
414 rplC_gene flipped: 1,11,161,165
414 rplC_gene normal: 24,26,73,92,109,170,177,178
433 rplC_gene symmetric: 89,183
434 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
434 rplC_gene flipped: 15,68,82,90,118,127,156
435 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
435 rplC_gene normal: 15,68,82,90,118,127,156
436 rplC_gene normal: 18,39,103,108,131,176,181,200
436 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
π° Bump-2 278-279 with 1 candidates
278 rplC_gene normal: 4
πΈ Sticky loop 376-383 (8) with 24 candidates
376 rplC_gene normal: 143,152,194
377 rplC_gene symmetric: 33,83,124,141,179,184
378 rplC_gene flipped: 143,152,194
380 rplC_gene normal: 63
380 rplC_gene flipped: 137
381 rplC_gene flipped: 5,193
381 rplC_gene normal: 40,79,84,100,186,187,188,201
πΈ Sticky loop 409-414 (6) with 48 candidates
410 rplC_gene normal: 63
410 rplC_gene flipped: 137
411 rplC_gene flipped: 5,193
411 rplC_gene normal: 40,79,84,100,186,187,188,201
412 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
412 rplC_gene normal: 137
413 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
413 rplC_gene flipped: 137
π° Bump-2 431-432 with 12 candidates
431 rplC_gene normal: 1,11,161,165
431 rplC_gene flipped: 24,26,73,92,109,170,177,178
π Medium stem 280-375 - (4-pair stem - open loops: πΈ Sticky loop 284-289 (6), π± Sticky-3 369-371
281 rplC_gene normal: 5,193
281 rplC_gene flipped: 40,79,84,100,186,187,188,201
282 rplC_gene flipped: 35,91,110,133,151
283 rplC_gene symmetric: 67,134,140
289 rplC_gene symmetric: 67,134,140
371 rplC_gene flipped: 35,91,110,133,151
372 rplC_gene flipped: 45
374 rplC_gene flipped: 63
374 rplC_gene normal: 137
πΈ Sticky loop 284-289 (6) with 21 candidates
284 rplC_gene symmetric: 16,21,113,139,145
285 rplC_gene symmetric: 67,134,140
286 rplC_gene symmetric: 16,21,113,139,145
287 rplC_gene symmetric: 67,134,140
288 rplC_gene symmetric: 16,21,113,139,145
π± Sticky-3 369-371 with 5 candidates
369 rplC_gene normal: 35,91,110,133,151
βοΈ Belt 290-368 - (13-pair stem - open loops: π Bump-1 303, π± Sticky-3 353-355)
290 rplC_gene symmetric: 16,21,113,139,145
291 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
291 rplC_gene normal: 138
294 rplC_gene flipped: 35,91,110,133,151
295 rplC_gene symmetric: 67,134,140
296 rplC_gene normal: 5,193
296 rplC_gene flipped: 23,205
297 rplC_gene normal: 63
297 rplC_gene flipped: 137
298 rplC_gene flipped: 15,68,82,90,118,127,156
299 rplC_gene normal: 15,68,82,90,118,127,156
300 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
301 rplC_gene symmetric: 33,83,124,141,179,184
302 rplC_gene normal: 31,119,162,196
303 rplC_gene flipped: 18,39,103,108,131,176,181,200
303 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
355 rplC_gene flipped: 31,119,162,196
356 rplC_gene flipped: 95,97,174,199
357 rplC_gene normal: 18,39,103,108,131,176,181,200
357 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
358 rplC_gene symmetric: 16,21,113,139,145
359 rplC_gene symmetric: 67,134,140
360 rplC_gene normal: 35,91,110,133,151
362 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
363 rplC_gene flipped: 95,97,174,199
364 rplC_gene symmetric: 89,183
365 rplC_gene normal: 95,97,174,199
366 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
368 rplC_gene normal: 45
π± Sticky-3 353-355 with 13 candidates
353 rplC_gene flipped: 1,11,161,165
353 rplC_gene normal: 24,26,73,92,109,170,177,178
354 rplC_gene normal: 45
π Short stem 304-352 - 3-pair stem - open loops: π± Sticky-3 307-309, πΈ Sticky loop 326-333 (8), π± Sticky-3 347-349
305 rplC_gene normal: 18,39,103,108,131,176,181,200
305 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
306 rplC_gene normal: 5,193
306 rplC_gene flipped: 23,205
333 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
349 rplC_gene flipped: 31,119,162,196
350 rplC_gene normal: 13,46,59,77,128,169
351 rplC_gene symmetric: 9,50,60,155,207
π± Sticky-3 307-309 with 9 candidates
307 rplC_gene normal: 63
307 rplC_gene flipped: 137
308 rplC_gene flipped: 15,68,82,90,118,127,156
πΈ Sticky loop 326-333 (8) with 46 candidates
326 rplC_gene flipped: 5,193
326 rplC_gene normal: 23,205
327 rplC_gene symmetric: 67,134,140
328 rplC_gene normal: 35,91,110,133,151
329 rplC_gene flipped: 5,193
329 rplC_gene normal: 40,79,84,100,186,187,188,201
331 rplC_gene normal: 5,193
331 rplC_gene flipped: 40,79,84,100,186,187,188,201
332 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π± Sticky-3 347-349 with 2 candidates
347 rplC_gene normal: 4
348 rplC_gene normal: 45
π Medium stem 310-325 - (5-pair stem - open loops: πΈ Sticky loop 315-320 (6)
310 rplC_gene normal: 15,68,82,90,118,127,156
311 rplC_gene flipped: 63
311 rplC_gene normal: 137
312 rplC_gene normal: 143,152,194
313 rplC_gene symmetric: 33,83,124,141,179,184
314 rplC_gene symmetric: 209
321 rplC_gene normal: 1,11,161,165
321 rplC_gene flipped: 24,26,73,92,109,170,177,178
323 rplC_gene normal: 5,193
323 rplC_gene flipped: 40,79,84,100,186,187,188,201
324 rplC_gene flipped: 63
324 rplC_gene normal: 137
πΈ Sticky loop 315-320 (6) with 27 candidates
315 rplC_gene symmetric: 33,83,124,141,179,184
316 rplC_gene symmetric: 209
317 rplC_gene symmetric: 33,83,124,141,179,184
318 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 334-346 - 3-pair stem - open loops: πΈ Sticky loop 337-343 (7)
336 rplC_gene normal: 19,44,66,72,76,87,111,153,158
343 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
343 rplC_gene flipped: 138
πΈ Sticky loop 337-343 (7) with 22 candidates
337 rplC_gene normal: 31,119,162,196
338 rplC_gene flipped: 45
339 rplC_gene normal: 1,11,161,165
339 rplC_gene flipped: 24,26,73,92,109,170,177,178
341 rplC_gene symmetric: 9,50,60,155,207
βοΈ Belt 384-408 - (9-pair stem - open loops: πΈ Sticky loop 393-399 (7))
384 rplC_gene flipped: 13,46,59,77,128,169
385 rplC_gene normal: 31,119,162,196
386 rplC_gene symmetric: 67,134,140
387 rplC_gene normal: 5,193
387 rplC_gene flipped: 23,205
388 rplC_gene flipped: 5,193
388 rplC_gene normal: 23,205
389 rplC_gene flipped: 45
391 rplC_gene flipped: 43
392 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
392 rplC_gene flipped: 15,68,82,90,118,127,156
399 rplC_gene normal: 35,91,110,133,151
400 rplC_gene flipped: 15,68,82,90,118,127,156
401 rplC_gene normal: 4
404 rplC_gene normal: 45
405 rplC_gene normal: 5,193
405 rplC_gene flipped: 23,205
πΈ Sticky loop 393-399 (7) with 76 candidates
393 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
393 rplC_gene normal: 15,68,82,90,118,127,156
394 rplC_gene normal: 18,39,103,108,131,176,181,200
394 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
395 rplC_gene symmetric: 16,21,113,139,145
396 rplC_gene flipped: 18,39,103,108,131,176,181,200
396 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
398 rplC_gene normal: 18,39,103,108,131,176,181,200
398 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
π Medium stem 415-430 - (6-pair stem - open loops: πΈ Sticky loop 421-424 (4)
415 rplC_gene flipped: 43
416 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
416 rplC_gene flipped: 15,68,82,90,118,127,156
417 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
417 rplC_gene normal: 15,68,82,90,118,127,156
418 rplC_gene symmetric: 89,183
419 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
419 rplC_gene flipped: 15,68,82,90,118,127,156
420 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
420 rplC_gene flipped: 137
424 rplC_gene normal: 143,152,194
425 rplC_gene flipped: 95,97,174,199
426 rplC_gene normal: 43
427 rplC_gene flipped: 4
429 rplC_gene normal: 4
πΈ Sticky loop 421-424 (4) with 23 candidates
421 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
421 rplC_gene flipped: 138
422 rplC_gene normal: 15,68,82,90,118,127,156
423 rplC_gene flipped: 63
423 rplC_gene normal: 137
π Short stem 470-477 - 2-pair stem - open loops: πΈ Sticky loop 472-475 (4)
471 rplC_gene normal: 15,68,82,90,118,127,156
475 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
476 rplC_gene flipped: 15,68,82,90,118,127,156
πΈ Sticky loop 472-475 (4) with 11 candidates
472 rplC_gene flipped: 63
472 rplC_gene normal: 137
473 rplC_gene normal: 143,152,194
474 rplC_gene symmetric: 33,83,124,141,179,184
π Medium stem 493-505 - (4-pair stem - open loops: πΈ Sticky five 497-501
495 rplC_gene normal: 63
495 rplC_gene flipped: 137
504 rplC_gene normal: 15,68,82,90,118,127,156
505 rplC_gene symmetric: 21,113,139,145
πΈ Sticky five 497-501 with 20 candidates
497 rplC_gene flipped: 35,91,110,133,151
498 rplC_gene symmetric: 67,134,140
499 rplC_gene normal: 35,91,110,133,151
500 rplC_gene flipped: 15,68,82,90,118,127,156
βοΈ Belt 542-569 - (12-pair stem - open loops: πΈ Sticky loop 554-557 (4))
542 rplC_gene symmetric: 209
543 rplC_gene flipped: 95,97,174,199
544 rplC_gene flipped: 62,63,123,159,208
547 rplC_gene flipped: 63
547 rplC_gene normal: 137
548 rplC_gene normal: 143,152,194
549 rplC_gene symmetric: 33,83,124,141,179,184
550 rplC_gene normal: 31,119,162,196
551 rplC_gene symmetric: 67,134,140
552 rplC_gene symmetric: 16,21,113,139,145
553 rplC_gene symmetric: 67,134,140
557 rplC_gene normal: 18,39,103,108,131,176,181,200
557 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
558 rplC_gene flipped: 31,119,162,196
559 rplC_gene symmetric: 33,83,124,141,179,184
560 rplC_gene normal: 31,119,162,196
561 rplC_gene flipped: 45
562 rplC_gene normal: 1,11,161,165
562 rplC_gene flipped: 24,26,73,92,109,170,177,178
563 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
563 rplC_gene normal: 137
564 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
564 rplC_gene normal: 15,68,82,90,118,127,156
565 rplC_gene flipped: 62,63,123,159,208
568 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
568 rplC_gene flipped: 138
569 rplC_gene symmetric: 16,21,113,139,145
πΈ Sticky loop 554-557 (4) with 15 candidates
554 rplC_gene normal: 35,91,110,133,151
555 rplC_gene flipped: 5,193
555 rplC_gene normal: 40,79,84,100,186,187,188,201
π Medium stem 572-587 - (4-pair stem - open loops: πΈ Sticky loop 576-583 (8)
573 rplC_gene flipped: 4
574 rplC_gene normal: 4
575 rplC_gene normal: 45
583 rplC_gene symmetric: 33,83,124,141,179,184
584 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
585 rplC_gene flipped: 5,193
585 rplC_gene normal: 40,79,84,100,186,187,188,201
587 rplC_gene flipped: 62,63,123,159,208
πΈ Sticky loop 576-583 (8) with 50 candidates
576 rplC_gene normal: 5,193
576 rplC_gene flipped: 23,205
578 rplC_gene flipped: 5,193
578 rplC_gene normal: 23,205
579 rplC_gene flipped: 18,39,103,108,131,176,181,200
579 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
581 rplC_gene normal: 5,193
581 rplC_gene flipped: 40,79,84,100,186,187,188,201
582 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Medium stem 588-1270 - (6-pair stem - open loops: πΈ Sticky loop 594-597 (4), π° Bump-2 678-679, π° Bump-2 819-820, π° Bump-2 1205-1206, πΈ Sticky loop 1257-1264 (8)
593 rplC_gene normal: 62,63,123,159,208
597 rplC_gene flipped: 45
679 rplC_gene normal: 19,44,66,72,76,87,111,153,158
820 rplC_gene normal: 15,68,82,90,118,127,156
1206 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1254 rplC_gene normal: 45
1255 rplC_gene flipped: 31,119,162,196
1256 rplC_gene flipped: 95,97,174,199
1264 rplC_gene normal: 15,68,82,90,118,127,156
1265 rplC_gene flipped: 35,91,110,133,151
1266 rplC_gene flipped: 45
1267 rplC_gene flipped: 4
1268 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1268 rplC_gene normal: 138
1269 rplC_gene flipped: 13,46,59,77,128,169
1270 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky loop 594-597 (4) with 23 candidates
595 rplC_gene normal: 18,39,103,108,131,176,181,200
595 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
596 rplC_gene symmetric: 16,21,113,139,145
π° Bump-2 1205-1206 with 14 candidates
1205 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky loop 1257-1264 (8) with 46 candidates
1257 rplC_gene normal: 18,39,103,108,131,176,181,200
1257 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1258 rplC_gene normal: 35,91,110,133,151
1259 rplC_gene flipped: 5,193
1259 rplC_gene normal: 40,79,84,100,186,187,188,201
1261 rplC_gene flipped: 1,11,161,165
1261 rplC_gene normal: 24,26,73,92,109,170,177,178
1263 rplC_gene flipped: 4
βοΈ Belt 598-677 - (13-pair stem - open loops: π° Bump-2 611-612, π± Sticky-3 634-636, π Bump-1 645, πΈ Sticky loop 661-664 (4))
599 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
600 rplC_gene normal: 13,46,59,77,128,169
601 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
601 rplC_gene flipped: 138
602 rplC_gene normal: 15,68,82,90,118,127,156
603 rplC_gene flipped: 63
603 rplC_gene normal: 137
604 rplC_gene flipped: 5,193
604 rplC_gene normal: 23,205
605 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
605 rplC_gene normal: 138
607 rplC_gene flipped: 4
608 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
608 rplC_gene normal: 138
609 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
609 rplC_gene normal: 137
610 rplC_gene normal: 19,44,66,72,76,87,111,153,158
612 rplC_gene flipped: 15,68,82,90,118,127,156
645 rplC_gene normal: 18,39,103,108,131,176,181,200
645 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
664 rplC_gene flipped: 45
668 rplC_gene symmetric: 21,113,139,145
669 rplC_gene flipped: 5,193
669 rplC_gene normal: 40,79,84,100,186,187,188,201
670 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
670 rplC_gene normal: 137
672 rplC_gene normal: 19,44,66,72,76,87,111,153,158
673 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
674 rplC_gene flipped: 15,68,82,90,118,127,156
676 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
676 rplC_gene normal: 138
677 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
677 rplC_gene normal: 137
π° Bump-2 611-612 with 14 candidates
611 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π± Sticky-3 634-636 with 23 candidates
634 rplC_gene normal: 19,44,66,72,76,87,111,153,158
635 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky loop 661-664 (4) with 6 candidates
661 rplC_gene flipped: 63
661 rplC_gene normal: 137
663 rplC_gene flipped: 5,193
663 rplC_gene normal: 23,205
π Medium stem 613-633 - (4-pair stem - open loops: π° Bump-2 617-618, π° Bump-2 628-629
613 rplC_gene normal: 4
616 rplC_gene flipped: 63
616 rplC_gene normal: 137
629 rplC_gene normal: 63
629 rplC_gene flipped: 137
630 rplC_gene flipped: 15,68,82,90,118,127,156
632 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
632 rplC_gene normal: 138
633 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
633 rplC_gene normal: 137
π Short stem 619-627 - 2-pair stem - open loops: πΈ Sticky five 621-625
619 rplC_gene normal: 63
619 rplC_gene flipped: 137
625 rplC_gene flipped: 15,68,82,90,118,127,156
626 rplC_gene normal: 15,68,82,90,118,127,156
627 rplC_gene flipped: 63
627 rplC_gene normal: 137
πΈ Sticky five 621-625 with 46 candidates
621 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
622 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
623 rplC_gene normal: 19,44,66,72,76,87,111,153,158
624 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 637-644 - 2-pair stem - open loops: πΈ Sticky loop 639-642 (4)
637 rplC_gene flipped: 35,91,110,133,151
638 rplC_gene flipped: 18,39,103,108,131,176,181,200
638 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
642 rplC_gene flipped: 4
643 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
643 rplC_gene normal: 138
πΈ Sticky loop 639-642 (4) with 5 candidates
640 rplC_gene flipped: 62,63,123,159,208
π Medium stem 646-660 - (5-pair stem - open loops: πΈ Sticky five 651-655
646 rplC_gene normal: 5,193
646 rplC_gene flipped: 23,205
648 rplC_gene normal: 143,152,194
649 rplC_gene symmetric: 33,83,124,141,179,184
650 rplC_gene normal: 31,119,162,196
655 rplC_gene flipped: 35,91,110,133,151
656 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
656 rplC_gene normal: 138
657 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
657 rplC_gene flipped: 138
658 rplC_gene flipped: 31,119,162,196
659 rplC_gene normal: 13,46,59,77,128,169
660 rplC_gene normal: 5,193
660 rplC_gene flipped: 40,79,84,100,186,187,188,201
πΈ Sticky five 651-655 with 30 candidates
651 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
651 rplC_gene normal: 138
653 rplC_gene flipped: 4
654 rplC_gene normal: 15,68,82,90,118,127,156
π Short stem 680-818 - 2-pair stem - open loops: πΈ Sticky five 682-686, πΈ Sticky loop 809-816 (8)
680 rplC_gene flipped: 143,152,194
681 rplC_gene flipped: 5,193
681 rplC_gene normal: 23,205
816 rplC_gene normal: 19,44,66,72,76,87,111,153,158
817 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
818 rplC_gene flipped: 15,68,82,90,118,127,156
πΈ Sticky five 682-686 with 9 candidates
682 rplC_gene symmetric: 67,134,140
683 rplC_gene normal: 35,91,110,133,151
685 rplC_gene flipped: 43
πΈ Sticky loop 809-816 (8) with 46 candidates
809 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
809 rplC_gene normal: 138
810 rplC_gene normal: 62,63,123,159,208
812 rplC_gene symmetric: 89,183
813 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
813 rplC_gene flipped: 15,68,82,90,118,127,156
π Medium stem 687-808 - (6-pair stem - open loops: π± Sticky-3 693-695, π Bump-1 785, πΈ Sticky loop 797-802 (6)
687 rplC_gene normal: 43
689 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
690 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
691 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
691 rplC_gene flipped: 137
692 rplC_gene flipped: 1,11,161,165
692 rplC_gene normal: 24,26,73,92,109,170,177,178
785 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
804 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
805 rplC_gene flipped: 95,97,174,199
806 rplC_gene normal: 18,39,103,108,131,176,181,200
806 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
807 rplC_gene normal: 5,193
807 rplC_gene flipped: 23,205
808 rplC_gene flipped: 5,193
808 rplC_gene normal: 23,205
π± Sticky-3 693-695 with 5 candidates
693 rplC_gene normal: 45
694 rplC_gene normal: 5,193
694 rplC_gene flipped: 23,205
πΈ Sticky loop 797-802 (6) with 6 candidates
798 rplC_gene normal: 63
798 rplC_gene flipped: 137
800 rplC_gene symmetric: 21,113,139,145
βοΈ Belt 696-784 - (12-pair stem - open loops: π Bump-1 708, π± Sticky-3 742-744, π° Bump-2 770-771, π Bump-1 773)
696 rplC_gene normal: 143,152,194
697 rplC_gene normal: 13,46,59,77,128,169
698 rplC_gene normal: 5,193
698 rplC_gene flipped: 40,79,84,100,186,187,188,201
699 rplC_gene flipped: 63
699 rplC_gene normal: 137
700 rplC_gene flipped: 5,193
700 rplC_gene normal: 23,205
701 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
701 rplC_gene normal: 138
702 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
702 rplC_gene flipped: 138
703 rplC_gene normal: 35,91,110,133,151
704 rplC_gene flipped: 15,68,82,90,118,127,156
705 rplC_gene normal: 15,68,82,90,118,127,156
706 rplC_gene flipped: 63
706 rplC_gene normal: 137
707 rplC_gene flipped: 5,193
707 rplC_gene normal: 23,205
708 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
708 rplC_gene normal: 138
744 rplC_gene symmetric: 16,21,113,139,145
765 rplC_gene flipped: 62,63,123,159,208
766 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
766 rplC_gene flipped: 138
767 rplC_gene symmetric: 16,21,113,139,145
768 rplC_gene symmetric: 67,134,140
769 rplC_gene normal: 5,193
769 rplC_gene flipped: 23,205
771 rplC_gene flipped: 95,97,174,199
772 rplC_gene normal: 18,39,103,108,131,176,181,200
772 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
773 rplC_gene normal: 5,193
773 rplC_gene flipped: 23,205
777 rplC_gene flipped: 5,193
777 rplC_gene normal: 23,205
778 rplC_gene symmetric: 67,134,140
779 rplC_gene normal: 35,91,110,133,151
780 rplC_gene flipped: 15,68,82,90,118,127,156
782 rplC_gene normal: 15,68,82,90,118,127,156
783 rplC_gene flipped: 63
783 rplC_gene normal: 137
784 rplC_gene normal: 143,152,194
π± Sticky-3 742-744 with 2 candidates
742 rplC_gene normal: 4
743 rplC_gene normal: 45
π° Bump-2 770-771 with 3 candidates
770 rplC_gene normal: 143,152,194
π Medium stem 709-741 - (4-pair stem - open loops: π± Sticky-3 713-715, πΈ Sticky loop 734-737 (4)
709 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
709 rplC_gene flipped: 138
710 rplC_gene normal: 5,193
710 rplC_gene flipped: 23,205
712 rplC_gene flipped: 5,193
712 rplC_gene normal: 23,205
715 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
715 rplC_gene normal: 138
737 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
738 rplC_gene flipped: 5,193
738 rplC_gene normal: 40,79,84,100,186,187,188,201
740 rplC_gene normal: 43
741 rplC_gene flipped: 4
π± Sticky-3 713-715 with 2 candidates
713 rplC_gene flipped: 45
714 rplC_gene flipped: 4
πΈ Sticky loop 734-737 (4) with 41 candidates
734 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
734 rplC_gene normal: 138
735 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
735 rplC_gene normal: 137
736 rplC_gene normal: 19,44,66,72,76,87,111,153,158
βοΈ Belt 716-733 - (7-pair stem - open loops: πΈ Sticky loop 723-726 (4))
717 rplC_gene symmetric: 9,50,60,155,207
719 rplC_gene normal: 43
720 rplC_gene flipped: 4
721 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
721 rplC_gene normal: 138
727 rplC_gene flipped: 63
727 rplC_gene normal: 137
728 rplC_gene normal: 63
728 rplC_gene flipped: 137
729 rplC_gene flipped: 5,193
729 rplC_gene normal: 40,79,84,100,186,187,188,201
730 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
730 rplC_gene normal: 137
731 rplC_gene normal: 19,44,66,72,76,87,111,153,158
732 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
733 rplC_gene flipped: 15,68,82,90,118,127,156
πΈ Sticky loop 723-726 (4) with 24 candidates
723 rplC_gene normal: 18,39,103,108,131,176,181,200
723 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
724 rplC_gene normal: 5,193
724 rplC_gene flipped: 23,205
725 rplC_gene normal: 63
725 rplC_gene flipped: 137
π Short stem 745-764 - 3-pair stem - open loops: π Bump-1 748
745 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
745 rplC_gene normal: 138
746 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
746 rplC_gene flipped: 138
747 rplC_gene normal: 35,91,110,133,151
748 rplC_gene flipped: 15,68,82,90,118,127,156
π Medium stem 749-769 - (5-pair stem - open loops: πΈ Sticky loop 754-761 (8)
752 rplC_gene normal: 4
761 rplC_gene normal: 45
762 rplC_gene normal: 35,91,110,133,151
763 rplC_gene flipped: 5,193
763 rplC_gene normal: 40,79,84,100,186,187,188,201
πΈ Sticky loop 754-761 (8) with 25 candidates
756 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
757 rplC_gene symmetric: 33,83,124,141,179,184
758 rplC_gene flipped: 143,152,194
759 rplC_gene normal: 63
759 rplC_gene flipped: 137
π Short stem 786-796 - 3-pair stem - open loops: πΈ Sticky five 789-793
786 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
786 rplC_gene flipped: 137
787 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
787 rplC_gene flipped: 138
788 rplC_gene normal: 4
793 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
793 rplC_gene normal: 138
794 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
794 rplC_gene normal: 137
795 rplC_gene normal: 19,44,66,72,76,87,111,153,158
796 rplC_gene flipped: 143,152,194
πΈ Sticky five 789-793 with 15 candidates
789 rplC_gene flipped: 43
791 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
791 rplC_gene flipped: 138
π Medium stem 821-1204 - (6-pair stem - open loops: πΈ Sticky loop 827-830 (4), π° Bump-2 845-846, πΈ Sticky five 950-954, πΈ Sticky loop 981-984 (4), π± Sticky-3 997-999, πΈ Sticky loop 1195-1198 (4)
821 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
822 rplC_gene flipped: 95,97,174,199
823 rplC_gene normal: 43
830 rplC_gene flipped: 5,193
830 rplC_gene normal: 23,205
846 rplC_gene normal: 62,63,123,159,208
954 rplC_gene symmetric: 67,134,140
984 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
984 rplC_gene normal: 137
999 rplC_gene flipped: 4
1170 rplC_gene symmetric: 209
1171 rplC_gene flipped: 95,97,174,199
1172 rplC_gene flipped: 62,63,123,159,208
1198 rplC_gene normal: 62,63,123,159,208
1200 rplC_gene normal: 18,39,103,108,131,176,181,200
1200 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1201 rplC_gene symmetric: 16,21,113,139,145
1202 rplC_gene flipped: 45
1203 rplC_gene flipped: 4
1204 rplC_gene normal: 15,68,82,90,118,127,156
πΈ Sticky loop 827-830 (4) with 2 candidates
829 rplC_gene flipped: 63
829 rplC_gene normal: 137
πΈ Sticky five 950-954 with 13 candidates
950 rplC_gene symmetric: 33,83,124,141,179,184
951 rplC_gene flipped: 143,152,194
953 rplC_gene flipped: 5,193
953 rplC_gene normal: 23,205
πΈ Sticky loop 981-984 (4) with 28 candidates
982 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
982 rplC_gene flipped: 138
983 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
983 rplC_gene normal: 138
π± Sticky-3 997-999 with 5 candidates
997 rplC_gene flipped: 95,97,174,199
998 rplC_gene normal: 43
πΈ Sticky loop 1195-1198 (4) with 32 candidates
1195 rplC_gene symmetric: 33,83,124,141,179,184
1196 rplC_gene normal: 31,119,162,196
1197 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1197 rplC_gene normal: 138
π Medium stem 831-844 - (5-pair stem - open loops: πΈ Sticky loop 836-839 (4)
831 rplC_gene flipped: 45
833 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
834 rplC_gene symmetric: 33,83,124,141,179,184
835 rplC_gene symmetric: 209
839 rplC_gene normal: 95,97,174,199
840 rplC_gene normal: 31,119,162,196
841 rplC_gene symmetric: 67,134,140
842 rplC_gene normal: 35,91,110,133,151
843 rplC_gene flipped: 15,68,82,90,118,127,156
844 rplC_gene normal: 4
πΈ Sticky loop 836-839 (4) with 28 candidates
836 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
837 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
837 rplC_gene normal: 15,68,82,90,118,127,156
838 rplC_gene symmetric: 89,183
βοΈ Belt 847-949 - (7-pair stem - open loops: π± Sticky-3 854-856, π± Sticky-3 940-942)
848 rplC_gene flipped: 1,11,161,165
848 rplC_gene normal: 24,26,73,92,109,170,177,178
849 rplC_gene flipped: 43
851 rplC_gene symmetric: 89,183
852 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
852 rplC_gene flipped: 15,68,82,90,118,127,156
853 rplC_gene normal: 19,44,66,72,76,87,111,153,158
942 rplC_gene flipped: 5,193
942 rplC_gene normal: 40,79,84,100,186,187,188,201
944 rplC_gene symmetric: 9,50,60,155,207
946 rplC_gene symmetric: 9,50,60,155,207
947 rplC_gene flipped: 13,46,59,77,128,169
948 rplC_gene flipped: 143,152,194
949 rplC_gene normal: 143,152,194
π± Sticky-3 854-856 with 3 candidates
854 rplC_gene flipped: 143,152,194
π± Sticky-3 940-942 with 4 candidates
941 rplC_gene symmetric: 21,113,139,145
βοΈ Belt 857-939 - (17-pair stem - open loops: π± Sticky-3 874-876, π° Bump-2 919-920, π Bump-1 923, π Bump-1 936)
858 rplC_gene flipped: 5,193
858 rplC_gene normal: 23,205
859 rplC_gene flipped: 45
861 rplC_gene symmetric: 21,113,139,145
863 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
864 rplC_gene normal: 13,46,59,77,128,169
865 rplC_gene symmetric: 9,50,60,155,207
867 rplC_gene normal: 18,39,103,108,131,176,181,200
867 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
868 rplC_gene symmetric: 16,21,113,139,145
869 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
869 rplC_gene normal: 138
871 rplC_gene normal: 62,63,123,159,208
872 rplC_gene normal: 95,97,174,199
873 rplC_gene flipped: 143,152,194
876 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
876 rplC_gene flipped: 138
920 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
920 rplC_gene normal: 137
921 rplC_gene normal: 19,44,66,72,76,87,111,153,158
922 rplC_gene flipped: 143,152,194
923 rplC_gene normal: 63
923 rplC_gene flipped: 137
925 rplC_gene symmetric: 21,113,139,145
926 rplC_gene flipped: 15,68,82,90,118,127,156
927 rplC_gene normal: 4
928 rplC_gene normal: 45
929 rplC_gene symmetric: 16,21,113,139,145
930 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
930 rplC_gene normal: 138
933 rplC_gene flipped: 43
935 rplC_gene symmetric: 9,50,60,155,207
936 rplC_gene flipped: 13,46,59,77,128,169
937 rplC_gene flipped: 143,152,194
939 rplC_gene normal: 63
939 rplC_gene flipped: 137
π± Sticky-3 874-876 with 9 candidates
874 rplC_gene normal: 143,152,194
875 rplC_gene normal: 13,46,59,77,128,169
π° Bump-2 919-920 with 12 candidates
919 rplC_gene normal: 1,11,161,165
919 rplC_gene flipped: 24,26,73,92,109,170,177,178
βοΈ Belt 877-918 - (8-pair stem - open loops: π± Sticky-3 885-887, π± Sticky-3 908-910)
877 rplC_gene normal: 15,68,82,90,118,127,156
878 rplC_gene flipped: 63
878 rplC_gene normal: 137
882 rplC_gene flipped: 5,193
882 rplC_gene normal: 23,205
883 rplC_gene flipped: 18,39,103,108,131,176,181,200
883 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
887 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
887 rplC_gene flipped: 15,68,82,90,118,127,156
910 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
910 rplC_gene normal: 138
912 rplC_gene normal: 18,39,103,108,131,176,181,200
912 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
913 rplC_gene flipped: 31,119,162,196
914 rplC_gene symmetric: 33,83,124,141,179,184
915 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
916 rplC_gene flipped: 15,68,82,90,118,127,156
917 rplC_gene normal: 4
π± Sticky-3 885-887 with 13 candidates
885 rplC_gene flipped: 1,11,161,165
885 rplC_gene normal: 24,26,73,92,109,170,177,178
886 rplC_gene flipped: 43
π± Sticky-3 908-910 with 14 candidates
908 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
908 rplC_gene flipped: 138
βοΈ Belt 888-907 - (7-pair stem - open loops: πΈ Sticky five 895-899, π Bump-1 905)
889 rplC_gene normal: 19,44,66,72,76,87,111,153,158
890 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
891 rplC_gene flipped: 5,193
891 rplC_gene normal: 40,79,84,100,186,187,188,201
893 rplC_gene flipped: 62,63,123,159,208
899 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
899 rplC_gene normal: 138
900 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
900 rplC_gene normal: 137
902 rplC_gene normal: 19,44,66,72,76,87,111,153,158
903 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
905 rplC_gene normal: 45
906 rplC_gene flipped: 31,119,162,196
907 rplC_gene normal: 13,46,59,77,128,169
πΈ Sticky five 895-899 with 62 candidates
895 rplC_gene normal: 1,11,161,165
895 rplC_gene flipped: 24,26,73,92,109,170,177,178
896 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
896 rplC_gene normal: 137
897 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
897 rplC_gene flipped: 137
898 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
898 rplC_gene flipped: 138
βοΈ Belt 955-980 - (10-pair stem - open loops: πΈ Sticky loop 965-970 (6))
955 rplC_gene flipped: 31,119,162,196
956 rplC_gene flipped: 95,97,174,199
957 rplC_gene normal: 43
958 rplC_gene flipped: 4
959 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
959 rplC_gene normal: 138
960 rplC_gene flipped: 13,46,59,77,128,169
961 rplC_gene normal: 31,119,162,196
962 rplC_gene flipped: 18,39,103,108,131,176,181,200
962 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
963 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
963 rplC_gene flipped: 15,68,82,90,118,127,156
964 rplC_gene normal: 19,44,66,72,76,87,111,153,158
970 rplC_gene normal: 35,91,110,133,151
971 rplC_gene flipped: 15,68,82,90,118,127,156
972 rplC_gene normal: 15,68,82,90,118,127,156
973 rplC_gene symmetric: 21,113,139,145
975 rplC_gene flipped: 63
975 rplC_gene normal: 137
977 rplC_gene normal: 63
977 rplC_gene flipped: 137
978 rplC_gene flipped: 15,68,82,90,118,127,156
980 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
980 rplC_gene normal: 138
πΈ Sticky loop 965-970 (6) with 33 candidates
965 rplC_gene normal: 31,119,162,196
966 rplC_gene flipped: 18,39,103,108,131,176,181,200
966 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
967 rplC_gene normal: 95,97,174,199
968 rplC_gene normal: 31,119,162,196
969 rplC_gene symmetric: 67,134,140
π Short stem 985-996 - 3-pair stem - open loops: πΈ Sticky loop 988-993 (6)
986 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
986 rplC_gene flipped: 137
987 rplC_gene normal: 5,193
987 rplC_gene flipped: 40,79,84,100,186,187,188,201
993 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
994 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
994 rplC_gene flipped: 137
995 rplC_gene normal: 5,193
995 rplC_gene flipped: 40,79,84,100,186,187,188,201
996 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky loop 988-993 (6) with 42 candidates
988 rplC_gene symmetric: 21,113,139,145
989 rplC_gene flipped: 5,193
989 rplC_gene normal: 40,79,84,100,186,187,188,201
990 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
990 rplC_gene normal: 137
991 rplC_gene normal: 19,44,66,72,76,87,111,153,158
992 rplC_gene symmetric: 209
π Medium stem 1000-1169 - (4-pair stem - open loops: π Bump-1 1004
1000 rplC_gene normal: 15,68,82,90,118,127,156
1001 rplC_gene flipped: 63
1001 rplC_gene normal: 137
1002 rplC_gene flipped: 5,193
1002 rplC_gene normal: 23,205
1003 rplC_gene flipped: 18,39,103,108,131,176,181,200
1003 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1004 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1004 rplC_gene flipped: 15,68,82,90,118,127,156
π Short stem 1005-1172 - 3-pair stem - open loops: π° Bump-2 1008-1009, π° Bump-2 1164-1165
1006 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1006 rplC_gene flipped: 137
1007 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1007 rplC_gene flipped: 138
1009 rplC_gene normal: 15,68,82,90,118,127,156
1157 rplC_gene flipped: 95,97,174,199
1158 rplC_gene normal: 18,39,103,108,131,176,181,200
1158 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1159 rplC_gene flipped: 31,119,162,196
1160 rplC_gene symmetric: 33,83,124,141,179,184
1161 rplC_gene flipped: 143,152,194
1162 rplC_gene normal: 143,152,194
1163 rplC_gene normal: 13,46,59,77,128,169
1165 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1166 rplC_gene symmetric: 33,83,124,141,179,184
1167 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1168 rplC_gene flipped: 5,193
1168 rplC_gene normal: 40,79,84,100,186,187,188,201
1169 rplC_gene flipped: 13,46,59,77,128,169
π° Bump-2 1164-1165 with 10 candidates
1164 rplC_gene normal: 5,193
1164 rplC_gene flipped: 40,79,84,100,186,187,188,201
π Medium stem 1010-1156 - (4-pair stem - open loops: πΈ Sticky loop 1014-1019 (6)
1010 rplC_gene flipped: 35,91,110,133,151
1011 rplC_gene flipped: 18,39,103,108,131,176,181,200
1011 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1013 rplC_gene flipped: 1,11,161,165
1013 rplC_gene normal: 24,26,73,92,109,170,177,178
1019 rplC_gene flipped: 4
πΈ Sticky loop 1014-1019 (6) with 31 candidates
1014 rplC_gene normal: 45
1015 rplC_gene normal: 5,193
1015 rplC_gene flipped: 23,205
1016 rplC_gene flipped: 5,193
1016 rplC_gene normal: 23,205
1017 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1017 rplC_gene normal: 138
π Short stem 1020-1157 - 1-pair stem - open loops: π Bump-1 1021
1020 rplC_gene normal: 15,68,82,90,118,127,156
1021 rplC_gene flipped: 35,91,110,133,151
π Medium stem 1022-1163 - (6-pair stem - open loops: π Sticky hub 1028-1038 (11), π Sticky hub 1134-1152 (19)
1022 rplC_gene symmetric: 67,134,140
1023 rplC_gene normal: 5,193
1023 rplC_gene flipped: 23,205
1025 rplC_gene normal: 63
1025 rplC_gene flipped: 137
1026 rplC_gene flipped: 15,68,82,90,118,127,156
1038 rplC_gene flipped: 15,68,82,90,118,127,156
1124 rplC_gene normal: 63
1124 rplC_gene flipped: 137
1125 rplC_gene flipped: 15,68,82,90,118,127,156
1126 rplC_gene normal: 15,68,82,90,118,127,156
1127 rplC_gene symmetric: 21,113,139,145
1129 rplC_gene normal: 45
1130 rplC_gene symmetric: 16,21,113,139,145
1131 rplC_gene flipped: 45
1132 rplC_gene flipped: 4
1133 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1133 rplC_gene normal: 138
1152 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1153 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1154 rplC_gene flipped: 15,68,82,90,118,127,156
1155 rplC_gene normal: 15,68,82,90,118,127,156
1156 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Sticky hub 1028-1038 (11) with 49 candidates
1028 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1028 rplC_gene normal: 138
1029 rplC_gene flipped: 13,46,59,77,128,169
1030 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1032 rplC_gene normal: 45
1033 rplC_gene symmetric: 16,21,113,139,145
1034 rplC_gene symmetric: 67,134,140
1035 rplC_gene normal: 5,193
1035 rplC_gene flipped: 23,205
1037 rplC_gene normal: 63
1037 rplC_gene flipped: 137
π Sticky hub 1134-1152 (19) with 114 candidates
1134 rplC_gene flipped: 13,46,59,77,128,169
1135 rplC_gene flipped: 143,152,194
1138 rplC_gene normal: 143,152,194
1139 rplC_gene flipped: 95,97,174,199
1140 rplC_gene normal: 43
1141 rplC_gene flipped: 4
1143 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1143 rplC_gene normal: 138
1144 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1144 rplC_gene normal: 137
1145 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1145 rplC_gene flipped: 137
1146 rplC_gene flipped: 1,11,161,165
1146 rplC_gene normal: 24,26,73,92,109,170,177,178
1147 rplC_gene normal: 45
1148 rplC_gene flipped: 31,119,162,196
1149 rplC_gene normal: 13,46,59,77,128,169
1150 rplC_gene symmetric: 9,50,60,155,207
1151 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1151 rplC_gene normal: 137
π Short stem 1039-1123 - 3-pair stem - open loops: π Bump-1 1042
1039 rplC_gene normal: 15,68,82,90,118,127,156
1040 rplC_gene flipped: 63
1040 rplC_gene normal: 137
1041 rplC_gene normal: 143,152,194
1042 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
βοΈ Belt 1043-1133 - (10-pair stem - open loops: πΈ Sticky loop 1053-1059 (7), π± Sticky-3 1118-1120)
1044 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1044 rplC_gene flipped: 137
1045 rplC_gene normal: 5,193
1045 rplC_gene flipped: 40,79,84,100,186,187,188,201
1046 rplC_gene symmetric: 21,113,139,145
1047 rplC_gene flipped: 5,193
1047 rplC_gene normal: 40,79,84,100,186,187,188,201
1049 rplC_gene normal: 5,193
1049 rplC_gene flipped: 40,79,84,100,186,187,188,201
1050 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1051 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1052 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1052 rplC_gene flipped: 137
1059 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1059 rplC_gene normal: 138
1120 rplC_gene symmetric: 33,83,124,141,179,184
1121 rplC_gene symmetric: 209
1122 rplC_gene symmetric: 33,83,124,141,179,184
1123 rplC_gene flipped: 143,152,194
πΈ Sticky loop 1053-1059 (7) with 20 candidates
1053 rplC_gene normal: 5,193
1053 rplC_gene flipped: 40,79,84,100,186,187,188,201
1054 rplC_gene flipped: 63
1054 rplC_gene normal: 137
1055 rplC_gene normal: 63
1055 rplC_gene flipped: 137
1057 rplC_gene normal: 45
1058 rplC_gene symmetric: 16,21,113,139,145
π± Sticky-3 1118-1120 with 22 candidates
1118 rplC_gene normal: 18,39,103,108,131,176,181,200
1118 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1119 rplC_gene flipped: 31,119,162,196
π Medium stem 1060-1117 - (5-pair stem - open loops: π Bump-1 1065, πΈ Sticky five 1091-1095, π Bump-1 1112
1060 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1060 rplC_gene flipped: 138
1061 rplC_gene normal: 5,193
1061 rplC_gene flipped: 23,205
1062 rplC_gene normal: 143,152,194
1063 rplC_gene flipped: 95,97,174,199
1064 rplC_gene flipped: 62,63,123,159,208
1095 rplC_gene normal: 4
1112 rplC_gene flipped: 18,39,103,108,131,176,181,200
1112 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1113 rplC_gene normal: 95,97,174,199
1114 rplC_gene flipped: 143,152,194
1115 rplC_gene normal: 143,152,194
1116 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1117 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1117 rplC_gene normal: 15,68,82,90,118,127,156
πΈ Sticky five 1091-1095 with 12 candidates
1091 rplC_gene symmetric: 33,83,124,141,179,184
1092 rplC_gene normal: 31,119,162,196
1093 rplC_gene flipped: 45
1094 rplC_gene flipped: 4
βοΈ Belt 1066-1090 - (8-pair stem - open loops: πΈ Sticky loop 1074-1082 (9))
1067 rplC_gene symmetric: 21,113,139,145
1068 rplC_gene flipped: 15,68,82,90,118,127,156
1069 rplC_gene normal: 15,68,82,90,118,127,156
1070 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1071 rplC_gene normal: 13,46,59,77,128,169
1072 rplC_gene normal: 5,193
1072 rplC_gene flipped: 40,79,84,100,186,187,188,201
1073 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1083 rplC_gene flipped: 4
1085 rplC_gene normal: 15,68,82,90,118,127,156
1086 rplC_gene symmetric: 21,113,139,145
1087 rplC_gene flipped: 15,68,82,90,118,127,156
1089 rplC_gene normal: 15,68,82,90,118,127,156
1090 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky loop 1074-1082 (9) with 52 candidates
1074 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1075 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1075 rplC_gene flipped: 137
1076 rplC_gene flipped: 1,11,161,165
1076 rplC_gene normal: 24,26,73,92,109,170,177,178
1077 rplC_gene flipped: 43
1079 rplC_gene flipped: 1,11,161,165
1079 rplC_gene normal: 24,26,73,92,109,170,177,178
π Short stem 1096-1111 - 1-pair stem - open loops: π± Sticky-3 1097-1099, π Bump-1 1110
1099 rplC_gene flipped: 95,97,174,199
1111 rplC_gene flipped: 35,91,110,133,151
π± Sticky-3 1097-1099 with 14 candidates
1098 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 1100-1109 - 2-pair stem - open loops: πΈ Sticky loop 1102-1107 (6)
1100 rplC_gene symmetric: 89,183
1107 rplC_gene flipped: 18,39,103,108,131,176,181,200
1107 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1108 rplC_gene normal: 95,97,174,199
1109 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky loop 1102-1107 (6) with 31 candidates
1102 rplC_gene symmetric: 9,50,60,155,207
1104 rplC_gene normal: 18,39,103,108,131,176,181,200
1104 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1105 rplC_gene normal: 5,193
1105 rplC_gene flipped: 23,205
1106 rplC_gene flipped: 5,193
1106 rplC_gene normal: 23,205
βοΈ Belt 1173-1194 - (9-pair stem - open loops: πΈ Sticky loop 1182-1185 (4))
1175 rplC_gene normal: 45
1176 rplC_gene flipped: 31,119,162,196
1177 rplC_gene symmetric: 33,83,124,141,179,184
1178 rplC_gene normal: 31,119,162,196
1179 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1179 rplC_gene normal: 138
1180 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1180 rplC_gene flipped: 138
1181 rplC_gene symmetric: 16,21,113,139,145
1186 rplC_gene flipped: 5,193
1186 rplC_gene normal: 23,205
1187 rplC_gene flipped: 45
1189 rplC_gene flipped: 63
1189 rplC_gene normal: 137
1192 rplC_gene normal: 63
1192 rplC_gene flipped: 137
1194 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky loop 1182-1185 (4) with 48 candidates
1182 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1182 rplC_gene normal: 138
1183 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1183 rplC_gene flipped: 138
1184 rplC_gene normal: 5,193
1184 rplC_gene flipped: 23,205
βοΈ Belt 1207-1253 - (7-pair stem - open loops: π Bump-1 1214)
1207 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1207 rplC_gene normal: 15,68,82,90,118,127,156
1208 rplC_gene normal: 18,39,103,108,131,176,181,200
1208 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1209 rplC_gene flipped: 31,119,162,196
1210 rplC_gene symmetric: 33,83,124,141,179,184
1211 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1212 rplC_gene flipped: 15,68,82,90,118,127,156
1213 rplC_gene normal: 15,68,82,90,118,127,156
1214 rplC_gene flipped: 63
1214 rplC_gene normal: 137
π Short stem 1215-1256 - 3-pair stem - open loops: πΈ Sticky loop 1218-1223 (6), π± Sticky-3 1244-1246
1215 rplC_gene flipped: 5,193
1215 rplC_gene normal: 23,205
1216 rplC_gene symmetric: 67,134,140
1217 rplC_gene symmetric: 16,21,113,139,145
1223 rplC_gene symmetric: 67,134,140
1246 rplC_gene normal: 15,68,82,90,118,127,156
1247 rplC_gene flipped: 35,91,110,133,151
1248 rplC_gene symmetric: 67,134,140
1249 rplC_gene flipped: 31,119,162,196
1250 rplC_gene symmetric: 33,83,124,141,179,184
1251 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1252 rplC_gene flipped: 15,68,82,90,118,127,156
1253 rplC_gene normal: 4
πΈ Sticky loop 1218-1223 (6) with 34 candidates
1218 rplC_gene symmetric: 67,134,140
1219 rplC_gene flipped: 31,119,162,196
1220 rplC_gene flipped: 95,97,174,199
1221 rplC_gene normal: 18,39,103,108,131,176,181,200
1221 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1222 rplC_gene symmetric: 16,21,113,139,145
π± Sticky-3 1244-1246 with 11 candidates
1244 rplC_gene symmetric: 21,113,139,145
1245 rplC_gene flipped: 15,68,82,90,118,127,156
βοΈ Belt 1224-1243 - (8-pair stem - open loops: πΈ Sticky loop 1232-1235 (4))
1224 rplC_gene normal: 35,91,110,133,151
1226 rplC_gene flipped: 63
1226 rplC_gene normal: 137
1227 rplC_gene normal: 143,152,194
1228 rplC_gene normal: 13,46,59,77,128,169
1229 rplC_gene flipped: 1,11,161,165
1229 rplC_gene normal: 24,26,73,92,109,170,177,178
1230 rplC_gene normal: 45
1231 rplC_gene flipped: 31,119,162,196
1235 rplC_gene normal: 63
1235 rplC_gene flipped: 137
1237 rplC_gene flipped: 63
1237 rplC_gene normal: 137
1238 rplC_gene flipped: 5,193
1238 rplC_gene normal: 23,205
1239 rplC_gene flipped: 45
1241 rplC_gene flipped: 43
1243 rplC_gene normal: 5,193
1243 rplC_gene flipped: 40,79,84,100,186,187,188,201
πΈ Sticky loop 1232-1235 (4) with 26 candidates
1232 rplC_gene flipped: 95,97,174,199
1233 rplC_gene normal: 18,39,103,108,131,176,181,200
1233 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1234 rplC_gene normal: 5,193
1234 rplC_gene flipped: 23,205
π Medium stem 1271-2020 - (4-pair stem - open loops: π Bump-1 1275
1273 rplC_gene flipped: 4
1275 rplC_gene normal: 15,68,82,90,118,127,156
π Medium stem 1276-2024 - (4-pair stem - open loops: πΈ Sticky five 1280-1284, π° Bump-2 1655-1656
1276 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1277 rplC_gene symmetric: 33,83,124,141,179,184
1278 rplC_gene flipped: 143,152,194
1656 rplC_gene symmetric: 89,183
πΈ Sticky five 1280-1284 with 19 candidates
1280 rplC_gene flipped: 5,193
1280 rplC_gene normal: 23,205
1281 rplC_gene symmetric: 67,134,140
1282 rplC_gene normal: 35,91,110,133,151
1283 rplC_gene flipped: 15,68,82,90,118,127,156
π Medium stem 1285-1303 - (6-pair stem - open loops: πΈ Sticky loop 1291-1297 (7)
1286 rplC_gene normal: 15,68,82,90,118,127,156
1287 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1288 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1290 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1297 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1298 rplC_gene flipped: 143,152,194
1299 rplC_gene normal: 63
1299 rplC_gene flipped: 137
1300 rplC_gene flipped: 15,68,82,90,118,127,156
1301 rplC_gene normal: 15,68,82,90,118,127,156
1302 rplC_gene symmetric: 21,113,139,145
1303 rplC_gene flipped: 5,193
1303 rplC_gene normal: 40,79,84,100,186,187,188,201
πΈ Sticky loop 1291-1297 (7) with 21 candidates
1291 rplC_gene symmetric: 209
1292 rplC_gene flipped: 95,97,174,199
1293 rplC_gene symmetric: 89,183
1294 rplC_gene normal: 95,97,174,199
1295 rplC_gene symmetric: 209
1296 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
π Medium stem 1304-1654 - (4-pair stem - open loops: πΈ Sticky loop 1308-1311 (4), π Bump-1 1635, π° Bump-2 1649-1650
1304 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1304 rplC_gene normal: 137
1305 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1305 rplC_gene flipped: 137
1306 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1306 rplC_gene flipped: 138
1307 rplC_gene normal: 15,68,82,90,118,127,156
1311 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1311 rplC_gene normal: 138
1650 rplC_gene symmetric: 21,113,139,145
1652 rplC_gene symmetric: 21,113,139,145
1653 rplC_gene flipped: 15,68,82,90,118,127,156
1654 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1654 rplC_gene normal: 138
πΈ Sticky loop 1308-1311 (4) with 6 candidates
1308 rplC_gene flipped: 63
1308 rplC_gene normal: 137
1310 rplC_gene flipped: 5,193
1310 rplC_gene normal: 23,205
π Medium stem 1312-1634 - (4-pair stem - open loops: π° Bump-2 1316-1317, πΈ Sticky five 1615-1619, π Bump-1 1630
1312 rplC_gene normal: 62,63,123,159,208
1313 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1313 rplC_gene flipped: 15,68,82,90,118,127,156
1314 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1314 rplC_gene normal: 15,68,82,90,118,127,156
1315 rplC_gene normal: 18,39,103,108,131,176,181,200
1315 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1317 rplC_gene flipped: 18,39,103,108,131,176,181,200
1317 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1619 rplC_gene flipped: 5,193
1619 rplC_gene normal: 23,205
1630 rplC_gene symmetric: 21,113,139,145
1632 rplC_gene symmetric: 21,113,139,145
1633 rplC_gene flipped: 15,68,82,90,118,127,156
1634 rplC_gene normal: 4
π° Bump-2 1316-1317 with 5 candidates
1316 rplC_gene symmetric: 16,21,113,139,145
πΈ Sticky five 1615-1619 with 17 candidates
1615 rplC_gene symmetric: 9,50,60,155,207
1617 rplC_gene normal: 5,193
1617 rplC_gene flipped: 40,79,84,100,186,187,188,201
1618 rplC_gene flipped: 63
1618 rplC_gene normal: 137
π Short stem 1318-1613 - 2-pair stem - open loops: π° Bump-2 1320-1321
1318 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1318 rplC_gene flipped: 15,68,82,90,118,127,156
1319 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1319 rplC_gene flipped: 137
1321 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1321 rplC_gene normal: 138
π° Bump-2 1320-1321 with 14 candidates
1320 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1320 rplC_gene flipped: 138
βοΈ Belt 1322-1614 - (7-pair stem - open loops: π± Sticky-3 1329-1331, π Bump-1 1341, πΈ Sticky loop 1348-1353 (6), π Bump-1 1611)
1322 rplC_gene flipped: 13,46,59,77,128,169
1323 rplC_gene normal: 31,119,162,196
1324 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1324 rplC_gene normal: 138
1326 rplC_gene flipped: 4
1327 rplC_gene normal: 4
1328 rplC_gene flipped: 43
1342 rplC_gene flipped: 35,91,110,133,151
1343 rplC_gene flipped: 18,39,103,108,131,176,181,200
1343 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1344 rplC_gene normal: 95,97,174,199
1345 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1346 rplC_gene flipped: 5,193
1346 rplC_gene normal: 40,79,84,100,186,187,188,201
1347 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1347 rplC_gene normal: 137
1353 rplC_gene normal: 15,68,82,90,118,127,156
1600 rplC_gene normal: 31,119,162,196
1601 rplC_gene flipped: 45
1602 rplC_gene normal: 1,11,161,165
1602 rplC_gene flipped: 24,26,73,92,109,170,177,178
1603 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1603 rplC_gene normal: 137
1606 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1606 rplC_gene flipped: 137
1607 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1607 rplC_gene flipped: 138
1609 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1609 rplC_gene normal: 138
1610 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1610 rplC_gene normal: 137
1611 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1612 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1613 rplC_gene flipped: 5,193
1613 rplC_gene normal: 40,79,84,100,186,187,188,201
π± Sticky-3 1329-1331 with 7 candidates
1329 rplC_gene normal: 95,97,174,199
1330 rplC_gene flipped: 143,152,194
πΈ Sticky loop 1348-1353 (6) with 19 candidates
1350 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1350 rplC_gene normal: 15,68,82,90,118,127,156
1351 rplC_gene normal: 43
1352 rplC_gene flipped: 4
π Short stem 1332-1340 - 2-pair stem - open loops: πΈ Sticky five 1334-1338
1333 rplC_gene normal: 143,152,194
1338 rplC_gene flipped: 5,193
1338 rplC_gene normal: 23,205
1339 rplC_gene symmetric: 67,134,140
1340 rplC_gene normal: 35,91,110,133,151
πΈ Sticky five 1334-1338 with 18 candidates
1334 rplC_gene normal: 13,46,59,77,128,169
1335 rplC_gene normal: 5,193
1335 rplC_gene flipped: 40,79,84,100,186,187,188,201
1336 rplC_gene flipped: 63
1336 rplC_gene normal: 137
π Medium stem 1354-1599 - (4-pair stem - open loops: π Bump-1 1358, π± Sticky-3 1391-1393, π° Bump-2 1412-1413
1354 rplC_gene flipped: 63
1354 rplC_gene normal: 137
1355 rplC_gene normal: 143,152,194
1356 rplC_gene symmetric: 33,83,124,141,179,184
1357 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π± Sticky-3 1391-1393 with 2 candidates
1391 rplC_gene flipped: 4
1392 rplC_gene normal: 4
π° Bump-2 1412-1413 with 12 candidates
1412 rplC_gene normal: 1,11,161,165
1412 rplC_gene flipped: 24,26,73,92,109,170,177,178
π Short stem 1359-1390 - 2-pair stem - open loops: π± Sticky-3 1361-1363, π± Sticky-3 1386-1388
1359 rplC_gene flipped: 63
1359 rplC_gene normal: 137
1360 rplC_gene normal: 143,152,194
1363 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1388 rplC_gene flipped: 5,193
1388 rplC_gene normal: 23,205
1389 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1389 rplC_gene normal: 138
π± Sticky-3 1361-1363 with 18 candidates
1361 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1362 rplC_gene normal: 19,44,66,72,76,87,111,153,158
π± Sticky-3 1386-1388 with 12 candidates
1386 rplC_gene normal: 5,193
1386 rplC_gene flipped: 40,79,84,100,186,187,188,201
1387 rplC_gene flipped: 63
1387 rplC_gene normal: 137
π Short stem 1364-1385 - 3-pair stem - open loops: π Bump-1 1367, π Bump-1 1382
1364 rplC_gene flipped: 15,68,82,90,118,127,156
1366 rplC_gene normal: 15,68,82,90,118,127,156
1367 rplC_gene flipped: 63
1367 rplC_gene normal: 137
1382 rplC_gene flipped: 15,68,82,90,118,127,156
1384 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1384 rplC_gene normal: 138
π Short stem 1368-1381 - 1-pair stem - open loops: π Bump-1 1369, π Bump-1 1380
1368 rplC_gene normal: 143,152,194
1369 rplC_gene symmetric: 33,83,124,141,179,184
1381 rplC_gene normal: 63
1381 rplC_gene flipped: 137
π Short stem 1370-1379 - 3-pair stem - open loops: πΈ Sticky loop 1373-1376 (4)
1370 rplC_gene normal: 31,119,162,196
1371 rplC_gene flipped: 45
1376 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1378 rplC_gene normal: 45
1379 rplC_gene normal: 5,193
1379 rplC_gene flipped: 23,205
πΈ Sticky loop 1373-1376 (4) with 27 candidates
1373 rplC_gene flipped: 35,91,110,133,151
1374 rplC_gene flipped: 18,39,103,108,131,176,181,200
1374 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1375 rplC_gene normal: 95,97,174,199
π Medium stem 1394-1411 - (5-pair stem - open loops: πΈ Sticky loop 1399-1406 (8)
1396 rplC_gene normal: 62,63,123,159,208
1397 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1397 rplC_gene flipped: 15,68,82,90,118,127,156
1398 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1398 rplC_gene normal: 15,68,82,90,118,127,156
1406 rplC_gene normal: 5,193
1406 rplC_gene flipped: 23,205
1407 rplC_gene flipped: 5,193
1407 rplC_gene normal: 23,205
1408 rplC_gene symmetric: 67,134,140
1409 rplC_gene symmetric: 16,21,113,139,145
1410 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1410 rplC_gene normal: 138
πΈ Sticky loop 1399-1406 (8) with 63 candidates
1399 rplC_gene normal: 18,39,103,108,131,176,181,200
1399 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1400 rplC_gene symmetric: 16,21,113,139,145
1401 rplC_gene flipped: 45
1402 rplC_gene normal: 1,11,161,165
1402 rplC_gene flipped: 24,26,73,92,109,170,177,178
1404 rplC_gene flipped: 62,63,123,159,208
1405 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1405 rplC_gene flipped: 138
βοΈ Belt 1414-1610 - (13-pair stem - open loops: π° Bump-2 1427-1428, π° Bump-2 1588-1589, πΈ Sticky loop 1592-1595 (4))
1414 rplC_gene normal: 18,39,103,108,131,176,181,200
1414 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1415 rplC_gene flipped: 31,119,162,196
1416 rplC_gene symmetric: 33,83,124,141,179,184
1417 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1418 rplC_gene flipped: 15,68,82,90,118,127,156
1419 rplC_gene normal: 15,68,82,90,118,127,156
1420 rplC_gene flipped: 63
1420 rplC_gene normal: 137
1425 rplC_gene normal: 63
1425 rplC_gene flipped: 137
1426 rplC_gene flipped: 5,193
1426 rplC_gene normal: 40,79,84,100,186,187,188,201
1428 rplC_gene flipped: 143,152,194
1589 rplC_gene flipped: 4
1590 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1590 rplC_gene normal: 138
1595 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1595 rplC_gene flipped: 138
1597 rplC_gene normal: 4
1598 rplC_gene flipped: 43
1599 rplC_gene normal: 95,97,174,199
π° Bump-2 1427-1428 with 6 candidates
1427 rplC_gene flipped: 13,46,59,77,128,169
π° Bump-2 1588-1589 with 1 candidates
1588 rplC_gene flipped: 45
πΈ Sticky loop 1592-1595 (4) with 13 candidates
1592 rplC_gene flipped: 1,11,161,165
1592 rplC_gene normal: 24,26,73,92,109,170,177,178
1593 rplC_gene flipped: 43
π Medium stem 1429-1587 - (6-pair stem - open loops: π± Sticky-3 1435-1437, πΈ Sticky loop 1574-1581 (8)
1429 rplC_gene normal: 63
1429 rplC_gene flipped: 137
1431 rplC_gene symmetric: 21,113,139,145
1432 rplC_gene flipped: 15,68,82,90,118,127,156
1433 rplC_gene normal: 15,68,82,90,118,127,156
1434 rplC_gene flipped: 63
1434 rplC_gene normal: 137
1437 rplC_gene normal: 43
1581 rplC_gene normal: 13,46,59,77,128,169
1582 rplC_gene flipped: 1,11,161,165
1582 rplC_gene normal: 24,26,73,92,109,170,177,178
1583 rplC_gene flipped: 43
1585 rplC_gene normal: 5,193
1585 rplC_gene flipped: 40,79,84,100,186,187,188,201
1586 rplC_gene flipped: 63
1586 rplC_gene normal: 137
1587 rplC_gene flipped: 5,193
1587 rplC_gene normal: 23,205
π± Sticky-3 1435-1437 with 7 candidates
1435 rplC_gene normal: 143,152,194
1436 rplC_gene flipped: 95,97,174,199
πΈ Sticky loop 1574-1581 (8) with 42 candidates
1574 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1574 rplC_gene normal: 15,68,82,90,118,127,156
1575 rplC_gene symmetric: 89,183
1577 rplC_gene normal: 43
1578 rplC_gene flipped: 4
1579 rplC_gene normal: 15,68,82,90,118,127,156
1580 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Medium stem 1438-1573 - (4-pair stem - open loops: π° Bump-2 1442-1443, π± Sticky-3 1567-1569
1439 rplC_gene normal: 45
1440 rplC_gene symmetric: 16,21,113,139,145
1441 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1441 rplC_gene normal: 138
1443 rplC_gene normal: 5,193
1443 rplC_gene flipped: 23,205
1571 rplC_gene normal: 15,68,82,90,118,127,156
1572 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1573 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
π° Bump-2 1442-1443 with 22 candidates
1442 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1442 rplC_gene flipped: 138
π± Sticky-3 1567-1569 with 9 candidates
1567 rplC_gene normal: 63
1567 rplC_gene flipped: 137
1568 rplC_gene flipped: 15,68,82,90,118,127,156
π Short stem 1444-1566 - 3-pair stem - open loops: π° Bump-2 1447-1448, π± Sticky-3 1561-1563
1444 rplC_gene normal: 143,152,194
1445 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1446 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1563 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1563 rplC_gene flipped: 15,68,82,90,118,127,156
1564 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1564 rplC_gene flipped: 137
1565 rplC_gene normal: 5,193
1565 rplC_gene flipped: 40,79,84,100,186,187,188,201
1566 rplC_gene flipped: 63
1566 rplC_gene normal: 137
π° Bump-2 1447-1448 with 3 candidates
1447 rplC_gene flipped: 143,152,194
π± Sticky-3 1561-1563 with 10 candidates
1561 rplC_gene flipped: 62,63,123,159,208
1562 rplC_gene normal: 62,63,123,159,208
βοΈ Belt 1449-1560 - (11-pair stem - open loops: πΈ Sticky loop 1460-1469 (10), π Bump-1 1535, π° Bump-2 1554-1555)
1449 rplC_gene normal: 143,152,194
1450 rplC_gene symmetric: 33,83,124,141,179,184
1451 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1452 rplC_gene flipped: 5,193
1452 rplC_gene normal: 40,79,84,100,186,187,188,201
1453 rplC_gene flipped: 13,46,59,77,128,169
1454 rplC_gene flipped: 143,152,194
1455 rplC_gene flipped: 5,193
1455 rplC_gene normal: 23,205
1456 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1456 rplC_gene normal: 138
1457 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1457 rplC_gene flipped: 138
1458 rplC_gene symmetric: 16,21,113,139,145
1459 rplC_gene flipped: 18,39,103,108,131,176,181,200
1459 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1469 rplC_gene normal: 15,68,82,90,118,127,156
1470 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1471 rplC_gene symmetric: 33,83,124,141,179,184
1472 rplC_gene normal: 31,119,162,196
1473 rplC_gene symmetric: 67,134,140
1474 rplC_gene symmetric: 16,21,113,139,145
1475 rplC_gene flipped: 45
1535 rplC_gene flipped: 13,46,59,77,128,169
1555 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1557 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1557 rplC_gene normal: 15,68,82,90,118,127,156
1558 rplC_gene normal: 18,39,103,108,131,176,181,200
1558 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1559 rplC_gene flipped: 31,119,162,196
1560 rplC_gene flipped: 95,97,174,199
πΈ Sticky loop 1460-1469 (10) with 56 candidates
1460 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1460 rplC_gene flipped: 15,68,82,90,118,127,156
1462 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1463 rplC_gene flipped: 143,152,194
1464 rplC_gene flipped: 5,193
1464 rplC_gene normal: 23,205
1465 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1465 rplC_gene normal: 138
1468 rplC_gene flipped: 4
π° Bump-2 1554-1555 with 4 candidates
1554 rplC_gene flipped: 31,119,162,196
π Short stem 1476-1534 - 3-pair stem - open loops: π Bump-1 1479, π° Bump-2 1530-1531
1477 rplC_gene flipped: 63
1477 rplC_gene normal: 137
1478 rplC_gene normal: 143,152,194
1479 rplC_gene flipped: 95,97,174,199
1531 rplC_gene symmetric: 9,50,60,155,207
1533 rplC_gene normal: 43
1534 rplC_gene normal: 1,11,161,165
1534 rplC_gene flipped: 24,26,73,92,109,170,177,178
π° Bump-2 1530-1531 with 6 candidates
1530 rplC_gene normal: 13,46,59,77,128,169
π Medium stem 1480-1529 - (4-pair stem - open loops: π± Sticky-3 1484-1486, π± Sticky-3 1523-1525
1480 rplC_gene normal: 18,39,103,108,131,176,181,200
1480 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1481 rplC_gene normal: 5,193
1481 rplC_gene flipped: 23,205
1482 rplC_gene flipped: 5,193
1482 rplC_gene normal: 23,205
1483 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1483 rplC_gene normal: 138
1486 rplC_gene normal: 62,63,123,159,208
1525 rplC_gene flipped: 13,46,59,77,128,169
1526 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1528 rplC_gene flipped: 63
1528 rplC_gene normal: 137
1529 rplC_gene normal: 143,152,194
π± Sticky-3 1523-1525 with 15 candidates
1523 rplC_gene normal: 35,91,110,133,151
1524 rplC_gene flipped: 5,193
1524 rplC_gene normal: 40,79,84,100,186,187,188,201
βοΈ Belt 1487-1522 - (12-pair stem - open loops: π Bump-1 1499, π° Bump-2 1518-1519)
1487 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1487 rplC_gene flipped: 15,68,82,90,118,127,156
1488 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1488 rplC_gene flipped: 137
1489 rplC_gene normal: 5,193
1489 rplC_gene flipped: 40,79,84,100,186,187,188,201
1490 rplC_gene flipped: 63
1490 rplC_gene normal: 137
1491 rplC_gene normal: 143,152,194
1492 rplC_gene normal: 13,46,59,77,128,169
1493 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1493 rplC_gene flipped: 138
1495 rplC_gene normal: 4
1496 rplC_gene flipped: 43
1497 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1497 rplC_gene flipped: 15,68,82,90,118,127,156
1498 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1499 rplC_gene flipped: 143,152,194
1519 rplC_gene symmetric: 67,134,140
1520 rplC_gene normal: 35,91,110,133,151
1522 rplC_gene normal: 45
π° Bump-2 1518-1519 with 4 candidates
1518 rplC_gene normal: 31,119,162,196
π Short stem 1500-1517 - 2-pair stem - open loops: πΈ Sticky five 1502-1506
1500 rplC_gene normal: 63
1500 rplC_gene flipped: 137
1501 rplC_gene flipped: 15,68,82,90,118,127,156
1507 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1507 rplC_gene flipped: 138
1508 rplC_gene normal: 15,68,82,90,118,127,156
1509 rplC_gene flipped: 63
1509 rplC_gene normal: 137
1510 rplC_gene normal: 143,152,194
1511 rplC_gene flipped: 95,97,174,199
1512 rplC_gene normal: 18,39,103,108,131,176,181,200
1512 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1513 rplC_gene normal: 35,91,110,133,151
1515 rplC_gene flipped: 63
1515 rplC_gene normal: 137
1516 rplC_gene normal: 143,152,194
1517 rplC_gene symmetric: 33,83,124,141,179,184
πΈ Sticky five 1502-1506 with 2 candidates
1504 rplC_gene normal: 4
1505 rplC_gene flipped: 43
βοΈ Belt 1536-1553 - (7-pair stem - open loops: πΈ Sticky loop 1543-1546 (4))
1536 rplC_gene flipped: 143,152,194
1537 rplC_gene flipped: 5,193
1537 rplC_gene normal: 23,205
1538 rplC_gene symmetric: 67,134,140
1539 rplC_gene flipped: 31,119,162,196
1540 rplC_gene flipped: 95,97,174,199
1541 rplC_gene normal: 18,39,103,108,131,176,181,200
1541 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1542 rplC_gene normal: 35,91,110,133,151
1546 rplC_gene normal: 13,46,59,77,128,169
1547 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1547 rplC_gene flipped: 138
1548 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1548 rplC_gene normal: 138
1550 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1550 rplC_gene flipped: 138
1552 rplC_gene normal: 4
1553 rplC_gene normal: 45
πΈ Sticky loop 1543-1546 (4) with 28 candidates
1543 rplC_gene flipped: 15,68,82,90,118,127,156
1544 rplC_gene normal: 15,68,82,90,118,127,156
1545 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 1620-1629 - 2-pair stem - open loops: πΈ Sticky loop 1622-1627 (6)
1620 rplC_gene symmetric: 67,134,140
1621 rplC_gene normal: 5,193
1621 rplC_gene flipped: 23,205
1627 rplC_gene flipped: 5,193
1627 rplC_gene normal: 23,205
1628 rplC_gene flipped: 45
πΈ Sticky loop 1622-1627 (6) with 34 candidates
1622 rplC_gene flipped: 5,193
1622 rplC_gene normal: 23,205
1623 rplC_gene flipped: 18,39,103,108,131,176,181,200
1623 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1625 rplC_gene normal: 5,193
1625 rplC_gene flipped: 40,79,84,100,186,187,188,201
1626 rplC_gene flipped: 63
1626 rplC_gene normal: 137
π Medium stem 1636-1648 - (4-pair stem - open loops: πΈ Sticky five 1640-1644
1636 rplC_gene normal: 1,11,161,165
1636 rplC_gene flipped: 24,26,73,92,109,170,177,178
1637 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1637 rplC_gene normal: 137
1638 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1638 rplC_gene flipped: 137
1639 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1639 rplC_gene flipped: 138
1644 rplC_gene symmetric: 209
1645 rplC_gene flipped: 95,97,174,199
1646 rplC_gene flipped: 62,63,123,159,208
1647 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1647 rplC_gene flipped: 138
1648 rplC_gene normal: 35,91,110,133,151
πΈ Sticky five 1640-1644 with 18 candidates
1640 rplC_gene normal: 15,68,82,90,118,127,156
1641 rplC_gene flipped: 63
1641 rplC_gene normal: 137
1642 rplC_gene normal: 143,152,194
1643 rplC_gene symmetric: 33,83,124,141,179,184
π Medium stem 1657-2028 - (4-pair stem - open loops: πΈ Sticky loop 1661-1664 (4), π Bump-1 2016
1657 rplC_gene normal: 95,97,174,199
1658 rplC_gene flipped: 143,152,194
1660 rplC_gene flipped: 5,193
1660 rplC_gene normal: 23,205
1664 rplC_gene normal: 15,68,82,90,118,127,156
2016 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2016 rplC_gene flipped: 138
2017 rplC_gene normal: 35,91,110,133,151
2018 rplC_gene flipped: 15,68,82,90,118,127,156
2019 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2019 rplC_gene normal: 138
πΈ Sticky loop 1661-1664 (4) with 15 candidates
1661 rplC_gene symmetric: 67,134,140
1662 rplC_gene normal: 35,91,110,133,151
1663 rplC_gene flipped: 15,68,82,90,118,127,156
βοΈ Belt 1665-2015 - (8-pair stem - open loops: π Bump-1 1673, π Bump-1 2007)
1665 rplC_gene flipped: 63
1665 rplC_gene normal: 137
1666 rplC_gene normal: 63
1666 rplC_gene flipped: 137
1667 rplC_gene flipped: 15,68,82,90,118,127,156
1668 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1668 rplC_gene normal: 138
1670 rplC_gene normal: 43
1672 rplC_gene flipped: 63
1672 rplC_gene normal: 137
1673 rplC_gene normal: 143,152,194
2008 rplC_gene normal: 5,193
2008 rplC_gene flipped: 40,79,84,100,186,187,188,201
2009 rplC_gene flipped: 35,91,110,133,151
2010 rplC_gene symmetric: 67,134,140
2011 rplC_gene normal: 35,91,110,133,151
2012 rplC_gene flipped: 15,68,82,90,118,127,156
2014 rplC_gene normal: 4
π Medium stem 1674-2006 - (5-pair stem - open loops: π Sticky hub 1679-1690 (12), πΈ Sticky loop 1766-1772 (7), π° Bump-2 2000-2001
1674 rplC_gene normal: 13,46,59,77,128,169
1675 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1675 rplC_gene flipped: 138
1678 rplC_gene normal: 4
1772 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1772 rplC_gene normal: 138
2001 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2003 rplC_gene symmetric: 21,113,139,145
2004 rplC_gene flipped: 5,193
2004 rplC_gene normal: 40,79,84,100,186,187,188,201
2006 rplC_gene symmetric: 89,183
π Sticky hub 1679-1690 (12) with 54 candidates
1679 rplC_gene normal: 45
1680 rplC_gene normal: 5,193
1680 rplC_gene flipped: 23,205
1681 rplC_gene flipped: 5,193
1681 rplC_gene normal: 23,205
1682 rplC_gene symmetric: 67,134,140
1683 rplC_gene flipped: 31,119,162,196
1684 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1685 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1686 rplC_gene normal: 31,119,162,196
1687 rplC_gene flipped: 45
1688 rplC_gene flipped: 4
1689 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1689 rplC_gene normal: 138
πΈ Sticky loop 1766-1772 (7) with 49 candidates
1766 rplC_gene normal: 143,152,194
1767 rplC_gene flipped: 95,97,174,199
1768 rplC_gene normal: 18,39,103,108,131,176,181,200
1768 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1769 rplC_gene flipped: 31,119,162,196
1770 rplC_gene normal: 13,46,59,77,128,169
1771 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1771 rplC_gene flipped: 138
π° Bump-2 2000-2001 with 9 candidates
2000 rplC_gene normal: 19,44,66,72,76,87,111,153,158
π Medium stem 1691-1715 - (5-pair stem - open loops: π± Sticky-3 1696-1698, πΈ Sticky loop 1707-1710 (4)
1691 rplC_gene flipped: 62,63,123,159,208
1692 rplC_gene normal: 62,63,123,159,208
1693 rplC_gene normal: 95,97,174,199
1694 rplC_gene flipped: 143,152,194
1698 rplC_gene symmetric: 21,113,139,145
1713 rplC_gene normal: 45
1714 rplC_gene symmetric: 16,21,113,139,145
1715 rplC_gene flipped: 45
π± Sticky-3 1696-1698 with 2 candidates
1696 rplC_gene normal: 63
1696 rplC_gene flipped: 137
πΈ Sticky loop 1707-1710 (4) with 27 candidates
1707 rplC_gene flipped: 95,97,174,199
1708 rplC_gene normal: 18,39,103,108,131,176,181,200
1708 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1709 rplC_gene normal: 35,91,110,133,151
π Short stem 1699-1706 - 2-pair stem - open loops: πΈ Sticky loop 1701-1704 (4)
1699 rplC_gene flipped: 15,68,82,90,118,127,156
1700 rplC_gene normal: 15,68,82,90,118,127,156
1704 rplC_gene symmetric: 9,50,60,155,207
1705 rplC_gene flipped: 13,46,59,77,128,169
1706 rplC_gene symmetric: 209
πΈ Sticky loop 1701-1704 (4) with 11 candidates
1701 rplC_gene flipped: 63
1701 rplC_gene normal: 137
1702 rplC_gene normal: 143,152,194
1703 rplC_gene normal: 13,46,59,77,128,169
π Medium stem 1716-1760 - (6-pair stem - open loops: π± Sticky-3 1722-1724, π° Bump-2 1753-1754
1717 rplC_gene flipped: 63
1717 rplC_gene normal: 137
1718 rplC_gene flipped: 5,193
1718 rplC_gene normal: 23,205
1719 rplC_gene symmetric: 67,134,140
1720 rplC_gene normal: 35,91,110,133,151
1724 rplC_gene flipped: 18,39,103,108,131,176,181,200
1724 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1754 rplC_gene normal: 15,68,82,90,118,127,156
1755 rplC_gene symmetric: 21,113,139,145
1758 rplC_gene normal: 1,11,161,165
1758 rplC_gene flipped: 24,26,73,92,109,170,177,178
1759 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1759 rplC_gene normal: 137
1760 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1760 rplC_gene flipped: 137
π± Sticky-3 1722-1724 with 6 candidates
1722 rplC_gene flipped: 63
1722 rplC_gene normal: 137
1723 rplC_gene flipped: 5,193
1723 rplC_gene normal: 23,205
π° Bump-2 1753-1754 with 7 candidates
1753 rplC_gene flipped: 15,68,82,90,118,127,156
π Short stem 1725-1752 - 3-pair stem - open loops: πΈ Sticky five 1728-1732, πΈ Sticky loop 1746-1749 (4)
1725 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1725 rplC_gene flipped: 15,68,82,90,118,127,156
1727 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1727 rplC_gene normal: 15,68,82,90,118,127,156
1732 rplC_gene flipped: 143,152,194
1749 rplC_gene flipped: 35,91,110,133,151
1750 rplC_gene flipped: 18,39,103,108,131,176,181,200
1750 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1751 rplC_gene normal: 95,97,174,199
1752 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
πΈ Sticky five 1728-1732 with 13 candidates
1728 rplC_gene symmetric: 89,183
1729 rplC_gene normal: 95,97,174,199
1730 rplC_gene symmetric: 209
1731 rplC_gene symmetric: 33,83,124,141,179,184
πΈ Sticky loop 1746-1749 (4) with 11 candidates
1746 rplC_gene flipped: 43
1748 rplC_gene normal: 5,193
1748 rplC_gene flipped: 40,79,84,100,186,187,188,201
π Medium stem 1733-1745 - (4-pair stem - open loops: πΈ Sticky five 1737-1741
1733 rplC_gene normal: 63
1733 rplC_gene flipped: 137
1735 rplC_gene normal: 45
1736 rplC_gene normal: 5,193
1736 rplC_gene flipped: 23,205
1741 rplC_gene normal: 18,39,103,108,131,176,181,200
1741 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1742 rplC_gene normal: 35,91,110,133,151
1743 rplC_gene flipped: 15,68,82,90,118,127,156
1745 rplC_gene normal: 4
πΈ Sticky five 1737-1741 with 20 candidates
1737 rplC_gene normal: 63
1737 rplC_gene flipped: 137
1739 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1740 rplC_gene flipped: 95,97,174,199
π Short stem 1761-1765 - 1-pair stem - open loops: π± Sticky-3 1762-1764
1761 rplC_gene normal: 5,193
1761 rplC_gene flipped: 40,79,84,100,186,187,188,201
1764 rplC_gene normal: 18,39,103,108,131,176,181,200
1764 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1765 rplC_gene normal: 5,193
1765 rplC_gene flipped: 23,205
π± Sticky-3 1762-1764 with 18 candidates
1762 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1763 rplC_gene flipped: 95,97,174,199
βοΈ Belt 1773-1999 - (9-pair stem - open loops: π° Bump-2 1782-1783, π° Bump-2 1799-1800, π° Bump-2 1837-1838, π± Sticky-3 1987-1989, π Bump-1 1992)
1774 rplC_gene normal: 18,39,103,108,131,176,181,200
1774 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1775 rplC_gene symmetric: 16,21,113,139,145
1776 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1776 rplC_gene normal: 138
1800 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1800 rplC_gene flipped: 138
1838 rplC_gene flipped: 143,152,194
1989 rplC_gene flipped: 95,97,174,199
1990 rplC_gene normal: 18,39,103,108,131,176,181,200
1990 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1991 rplC_gene symmetric: 16,21,113,139,145
1992 rplC_gene flipped: 18,39,103,108,131,176,181,200
1992 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1994 rplC_gene symmetric: 89,183
1995 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1995 rplC_gene flipped: 15,68,82,90,118,127,156
1996 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1996 rplC_gene flipped: 137
1997 rplC_gene symmetric: 9,50,60,155,207
1998 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1998 rplC_gene normal: 137
π° Bump-2 1782-1783 with 1 candidates
1782 rplC_gene flipped: 4
π° Bump-2 1799-1800 with 6 candidates
1799 rplC_gene normal: 13,46,59,77,128,169
π° Bump-2 1837-1838 with 9 candidates
1837 rplC_gene normal: 19,44,66,72,76,87,111,153,158
π± Sticky-3 1987-1989 with 5 candidates
1987 rplC_gene flipped: 63
1987 rplC_gene normal: 137
1988 rplC_gene normal: 143,152,194
π Short stem 1784-1798 - 3-pair stem - open loops: πΈ Sticky loop 1787-1795 (9)
1786 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1786 rplC_gene normal: 138
1795 rplC_gene normal: 18,39,103,108,131,176,181,200
1795 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1796 rplC_gene symmetric: 16,21,113,139,145
1797 rplC_gene symmetric: 67,134,140
1798 rplC_gene flipped: 31,119,162,196
πΈ Sticky loop 1787-1795 (9) with 40 candidates
1788 rplC_gene symmetric: 9,50,60,155,207
1790 rplC_gene normal: 5,193
1790 rplC_gene flipped: 40,79,84,100,186,187,188,201
1791 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1792 rplC_gene normal: 13,46,59,77,128,169
1793 rplC_gene symmetric: 9,50,60,155,207
βοΈ Belt 1801-1836 - (9-pair stem - open loops: π± Sticky-3 1810-1812, π± Sticky-3 1823-1825, π° Bump-2 1827-1828)
1802 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1802 rplC_gene normal: 138
1804 rplC_gene symmetric: 9,50,60,155,207
1805 rplC_gene flipped: 13,46,59,77,128,169
1806 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1807 rplC_gene flipped: 15,68,82,90,118,127,156
1809 rplC_gene normal: 15,68,82,90,118,127,156
1812 rplC_gene normal: 5,193
1812 rplC_gene flipped: 23,205
1825 rplC_gene symmetric: 16,21,113,139,145
1826 rplC_gene symmetric: 67,134,140
1828 rplC_gene flipped: 5,193
1828 rplC_gene normal: 40,79,84,100,186,187,188,201
1829 rplC_gene flipped: 13,46,59,77,128,169
1830 rplC_gene symmetric: 209
1831 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1832 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1832 rplC_gene normal: 15,68,82,90,118,127,156
1833 rplC_gene normal: 18,39,103,108,131,176,181,200
1833 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1834 rplC_gene flipped: 31,119,162,196
1835 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
π± Sticky-3 1810-1812 with 8 candidates
1810 rplC_gene flipped: 35,91,110,133,151
1811 rplC_gene symmetric: 67,134,140
π± Sticky-3 1823-1825 with 7 candidates
1823 rplC_gene flipped: 5,193
1823 rplC_gene normal: 23,205
1824 rplC_gene symmetric: 67,134,140
π° Bump-2 1827-1828 with 5 candidates
1827 rplC_gene normal: 35,91,110,133,151
π Short stem 1813-1822 - 3-pair stem - open loops: πΈ Sticky loop 1816-1819 (4)
1813 rplC_gene normal: 63
1813 rplC_gene flipped: 137
1814 rplC_gene flipped: 5,193
1814 rplC_gene normal: 40,79,84,100,186,187,188,201
1815 rplC_gene flipped: 13,46,59,77,128,169
1820 rplC_gene normal: 1,11,161,165
1820 rplC_gene flipped: 24,26,73,92,109,170,177,178
1821 rplC_gene flipped: 13,46,59,77,128,169
1822 rplC_gene flipped: 143,152,194
πΈ Sticky loop 1816-1819 (4) with 5 candidates
1816 rplC_gene normal: 31,119,162,196
1817 rplC_gene flipped: 45
π Medium stem 1839-1986 - (4-pair stem - open loops: π Bump-1 1843, π Sticky hub 1936-1955 (20), πΈ Sticky loop 1973-1982 (10)
1839 rplC_gene flipped: 5,193
1839 rplC_gene normal: 23,205
1840 rplC_gene symmetric: 67,134,140
1841 rplC_gene flipped: 31,119,162,196
1842 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1843 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1955 rplC_gene normal: 62,63,123,159,208
1982 rplC_gene normal: 5,193
1982 rplC_gene flipped: 23,205
1983 rplC_gene normal: 143,152,194
1984 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1985 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1985 rplC_gene flipped: 137
1986 rplC_gene normal: 5,193
1986 rplC_gene flipped: 40,79,84,100,186,187,188,201
π Sticky hub 1936-1955 (20) with 137 candidates
1937 rplC_gene normal: 4
1939 rplC_gene normal: 62,63,123,159,208
1940 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1940 rplC_gene flipped: 15,68,82,90,118,127,156
1941 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1941 rplC_gene normal: 15,68,82,90,118,127,156
1942 rplC_gene flipped: 62,63,123,159,208
1943 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1943 rplC_gene flipped: 138
1944 rplC_gene symmetric: 16,21,113,139,145
1945 rplC_gene flipped: 18,39,103,108,131,176,181,200
1945 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1946 rplC_gene normal: 95,97,174,199
1947 rplC_gene flipped: 143,152,194
1949 rplC_gene flipped: 5,193
1949 rplC_gene normal: 23,205
1950 rplC_gene flipped: 45
1951 rplC_gene flipped: 4
1952 rplC_gene normal: 15,68,82,90,118,127,156
1953 rplC_gene flipped: 35,91,110,133,151
1954 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1954 rplC_gene normal: 138
πΈ Sticky loop 1973-1982 (10) with 20 candidates
1973 rplC_gene symmetric: 33,83,124,141,179,184
1974 rplC_gene normal: 31,119,162,196
1975 rplC_gene flipped: 45
1976 rplC_gene flipped: 4
1977 rplC_gene normal: 4
1978 rplC_gene normal: 45
1979 rplC_gene normal: 35,91,110,133,151
1981 rplC_gene normal: 45
π Short stem 1844-1914 - 3-pair stem - open loops: π° Bump-2 1847-1848
1844 rplC_gene flipped: 143,152,194
1845 rplC_gene normal: 63
1845 rplC_gene flipped: 137
1846 rplC_gene flipped: 15,68,82,90,118,127,156
1848 rplC_gene flipped: 63
1848 rplC_gene normal: 137
π° Bump-2 1847-1848 with 7 candidates
1847 rplC_gene normal: 15,68,82,90,118,127,156
βοΈ Belt 1849-1916 - (7-pair stem - open loops: π° Bump-2 1856-1857, π° Bump-2 1910-1911)
1849 rplC_gene flipped: 5,193
1849 rplC_gene normal: 23,205
1850 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1850 rplC_gene normal: 138
1852 rplC_gene flipped: 4
1853 rplC_gene normal: 4
1855 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1855 rplC_gene flipped: 138
1911 rplC_gene flipped: 4
1912 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1912 rplC_gene normal: 138
1914 rplC_gene normal: 43
π° Bump-2 1856-1857 with 5 candidates
1856 rplC_gene normal: 35,91,110,133,151
π° Bump-2 1910-1911 with 1 candidates
1910 rplC_gene flipped: 45
π Short stem 1858-1909 - 3-pair stem - open loops: π± Sticky-3 1861-1863, π± Sticky-3 1899-1901
1858 rplC_gene normal: 45
1859 rplC_gene normal: 5,193
1859 rplC_gene flipped: 23,205
1863 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1863 rplC_gene normal: 138
1901 rplC_gene flipped: 13,46,59,77,128,169
1902 rplC_gene flipped: 143,152,194
1903 rplC_gene normal: 143,152,194
1904 rplC_gene symmetric: 33,83,124,141,179,184
1905 rplC_gene flipped: 143,152,194
1906 rplC_gene normal: 143,152,194
1907 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1908 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1909 rplC_gene normal: 31,119,162,196
π± Sticky-3 1861-1863 with 4 candidates
1862 rplC_gene flipped: 5,193
1862 rplC_gene normal: 23,205
π± Sticky-3 1899-1901 with 14 candidates
1900 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1900 rplC_gene normal: 138
π Short stem 1864-1898 - 2-pair stem - open loops: π Bump-1 1866, π Bump-1 1896
1866 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1896 rplC_gene flipped: 5,193
1896 rplC_gene normal: 23,205
1897 rplC_gene flipped: 45
1898 rplC_gene flipped: 4
βοΈ Belt 1867-1895 - (7-pair stem - open loops: π° Bump-2 1874-1875, π± Sticky-3 1886-1888)
1867 rplC_gene symmetric: 33,83,124,141,179,184
1868 rplC_gene symmetric: 209
1869 rplC_gene normal: 13,46,59,77,128,169
1870 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
1870 rplC_gene flipped: 138
1871 rplC_gene normal: 15,68,82,90,118,127,156
1872 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1873 rplC_gene symmetric: 33,83,124,141,179,184
1875 rplC_gene flipped: 15,68,82,90,118,127,156
1888 rplC_gene flipped: 15,68,82,90,118,127,156
1889 rplC_gene normal: 15,68,82,90,118,127,156
1890 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1891 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
1894 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1895 rplC_gene flipped: 143,152,194
π° Bump-2 1874-1875 with 14 candidates
1874 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π± Sticky-3 1886-1888 with 18 candidates
1886 rplC_gene normal: 95,97,174,199
1887 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 1876-1885 - 2-pair stem - open loops: πΈ Sticky loop 1878-1883 (6)
1876 rplC_gene normal: 15,68,82,90,118,127,156
1877 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1883 rplC_gene normal: 35,91,110,133,151
1885 rplC_gene flipped: 43
πΈ Sticky loop 1878-1883 (6) with 33 candidates
1878 rplC_gene flipped: 95,97,174,199
1879 rplC_gene symmetric: 89,183
1881 rplC_gene flipped: 62,63,123,159,208
1882 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
1882 rplC_gene flipped: 138
π Medium stem 1917-1935 - (6-pair stem - open loops: πΈ Sticky loop 1923-1929 (7)
1917 rplC_gene flipped: 4
1918 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
1918 rplC_gene normal: 138
1919 rplC_gene flipped: 13,46,59,77,128,169
1920 rplC_gene flipped: 143,152,194
1921 rplC_gene flipped: 5,193
1921 rplC_gene normal: 23,205
1922 rplC_gene flipped: 18,39,103,108,131,176,181,200
1922 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
1929 rplC_gene flipped: 5,193
1929 rplC_gene normal: 23,205
1930 rplC_gene flipped: 45
1932 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1933 rplC_gene symmetric: 33,83,124,141,179,184
1934 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1935 rplC_gene flipped: 15,68,82,90,118,127,156
πΈ Sticky loop 1923-1929 (7) with 45 candidates
1923 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1923 rplC_gene flipped: 15,68,82,90,118,127,156
1924 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1924 rplC_gene normal: 15,68,82,90,118,127,156
1925 rplC_gene normal: 43
1926 rplC_gene flipped: 4
1927 rplC_gene normal: 15,68,82,90,118,127,156
1928 rplC_gene flipped: 63
1928 rplC_gene normal: 137
π Medium stem 1956-1972 - (6-pair stem - open loops: πΈ Sticky five 1962-1966
1956 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
1956 rplC_gene flipped: 15,68,82,90,118,127,156
1957 rplC_gene normal: 19,44,66,72,76,87,111,153,158
1958 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1959 rplC_gene flipped: 5,193
1959 rplC_gene normal: 40,79,84,100,186,187,188,201
1960 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
1960 rplC_gene normal: 137
1961 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
1961 rplC_gene normal: 15,68,82,90,118,127,156
1966 rplC_gene flipped: 13,46,59,77,128,169
1967 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
1968 rplC_gene flipped: 15,68,82,90,118,127,156
1969 rplC_gene normal: 4
1970 rplC_gene normal: 45
1971 rplC_gene normal: 5,193
1971 rplC_gene flipped: 23,205
1972 rplC_gene normal: 143,152,194
πΈ Sticky five 1962-1966 with 33 candidates
1962 rplC_gene normal: 18,39,103,108,131,176,181,200
1962 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
1963 rplC_gene flipped: 31,119,162,196
1964 rplC_gene normal: 13,46,59,77,128,169
1965 rplC_gene symmetric: 9,50,60,155,207
π Medium stem 2034-2051 - (5-pair stem - open loops: πΈ Sticky loop 2039-2046 (8)
2034 rplC_gene flipped: 31,119,162,196
2035 rplC_gene normal: 13,46,59,77,128,169
2036 rplC_gene normal: 5,193
2036 rplC_gene flipped: 40,79,84,100,186,187,188,201
2037 rplC_gene flipped: 35,91,110,133,151
2038 rplC_gene symmetric: 67,134,140
2046 rplC_gene symmetric: 33,83,124,141,179,184
2047 rplC_gene flipped: 143,152,194
2048 rplC_gene normal: 143,152,194
2049 rplC_gene normal: 13,46,59,77,128,169
2050 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
2050 rplC_gene flipped: 138
2051 rplC_gene normal: 15,68,82,90,118,127,156
πΈ Sticky loop 2039-2046 (8) with 46 candidates
2039 rplC_gene symmetric: 16,21,113,139,145
2040 rplC_gene flipped: 45
2041 rplC_gene normal: 1,11,161,165
2041 rplC_gene flipped: 24,26,73,92,109,170,177,178
2042 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2042 rplC_gene normal: 137
2044 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2045 rplC_gene symmetric: 209
βοΈ Belt 2054-2633 - (8-pair stem - open loops: π Bump-1 2062)
2054 rplC_gene flipped: 13,46,59,77,128,169
2055 rplC_gene flipped: 143,152,194
2056 rplC_gene normal: 63
2056 rplC_gene flipped: 137
2057 rplC_gene flipped: 15,68,82,90,118,127,156
2059 rplC_gene normal: 15,68,82,90,118,127,156
2060 rplC_gene symmetric: 21,113,139,145
2061 rplC_gene flipped: 5,193
2061 rplC_gene normal: 40,79,84,100,186,187,188,201
2062 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2062 rplC_gene normal: 137
π Short stem 2063-2636 - 3-pair stem - open loops: π Bump-1 2066, π° Bump-2 2624-2625
2065 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2066 rplC_gene normal: 31,119,162,196
2625 rplC_gene symmetric: 33,83,124,141,179,184
2626 rplC_gene symmetric: 209
2627 rplC_gene flipped: 95,97,174,199
2628 rplC_gene normal: 18,39,103,108,131,176,181,200
2628 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2629 rplC_gene normal: 5,193
2629 rplC_gene flipped: 23,205
2630 rplC_gene normal: 63
2630 rplC_gene flipped: 137
2632 rplC_gene symmetric: 21,113,139,145
2633 rplC_gene flipped: 15,68,82,90,118,127,156
π° Bump-2 2624-2625 with 3 candidates
2624 rplC_gene normal: 143,152,194
π Short stem 2067-2623 - 2-pair stem - open loops: πΈ Sticky loop 2069-2074 (6), πΈ Sticky loop 2458-2463 (6), πΈ Sticky loop 2511-2517 (7), πΈ Sticky five 2594-2598, πΈ Sticky loop 2618-2621 (4)
2067 rplC_gene symmetric: 67,134,140
2068 rplC_gene normal: 35,91,110,133,151
2456 rplC_gene normal: 18,39,103,108,131,176,181,200
2456 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2457 rplC_gene normal: 35,91,110,133,151
2463 rplC_gene symmetric: 209
2517 rplC_gene flipped: 1,11,161,165
2517 rplC_gene normal: 24,26,73,92,109,170,177,178
2598 rplC_gene symmetric: 21,113,139,145
2621 rplC_gene symmetric: 67,134,140
2622 rplC_gene normal: 5,193
2622 rplC_gene flipped: 23,205
πΈ Sticky loop 2069-2074 (6) with 61 candidates
2069 rplC_gene flipped: 15,68,82,90,118,127,156
2070 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2070 rplC_gene normal: 138
2071 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2071 rplC_gene normal: 137
2072 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2072 rplC_gene normal: 15,68,82,90,118,127,156
2073 rplC_gene flipped: 62,63,123,159,208
πΈ Sticky loop 2458-2463 (6) with 39 candidates
2460 rplC_gene normal: 1,11,161,165
2460 rplC_gene flipped: 24,26,73,92,109,170,177,178
2461 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2461 rplC_gene normal: 137
2462 rplC_gene normal: 19,44,66,72,76,87,111,153,158
πΈ Sticky loop 2511-2517 (7) with 18 candidates
2512 rplC_gene flipped: 1,11,161,165
2512 rplC_gene normal: 24,26,73,92,109,170,177,178
2513 rplC_gene flipped: 43
2515 rplC_gene symmetric: 9,50,60,155,207
πΈ Sticky five 2594-2598 with 12 candidates
2594 rplC_gene normal: 31,119,162,196
2595 rplC_gene symmetric: 67,134,140
2596 rplC_gene normal: 35,91,110,133,151
πΈ Sticky loop 2618-2621 (4) with 22 candidates
2618 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2619 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2620 rplC_gene normal: 31,119,162,196
π Medium stem 2075-2455 - (4-pair stem - open loops: π Bump-1 2079
2076 rplC_gene normal: 1,11,161,165
2076 rplC_gene flipped: 24,26,73,92,109,170,177,178
2078 rplC_gene normal: 43
βοΈ Belt 2080-2457 - (7-pair stem - open loops: π Bump-1 2087, π° Bump-2 2255-2256, π° Bump-2 2293-2294, πΈ Sticky loop 2396-2405 (10), π Sticky hub 2433-2444 (12), π° Bump-2 2450-2451)
2082 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2083 rplC_gene flipped: 95,97,174,199
2084 rplC_gene flipped: 62,63,123,159,208
2085 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2085 rplC_gene flipped: 138
2086 rplC_gene normal: 35,91,110,133,151
2087 rplC_gene flipped: 5,193
2087 rplC_gene normal: 40,79,84,100,186,187,188,201
2256 rplC_gene flipped: 18,39,103,108,131,176,181,200
2256 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2294 rplC_gene flipped: 95,97,174,199
2405 rplC_gene flipped: 15,68,82,90,118,127,156
2431 rplC_gene flipped: 4
2446 rplC_gene normal: 63
2446 rplC_gene flipped: 137
2449 rplC_gene flipped: 4
2452 rplC_gene normal: 5,193
2452 rplC_gene flipped: 40,79,84,100,186,187,188,201
2453 rplC_gene flipped: 63
2453 rplC_gene normal: 137
2454 rplC_gene normal: 143,152,194
2455 rplC_gene flipped: 95,97,174,199
π° Bump-2 2255-2256 with 4 candidates
2255 rplC_gene flipped: 5,193
2255 rplC_gene normal: 23,205
π° Bump-2 2293-2294 with 3 candidates
2293 rplC_gene normal: 143,152,194
πΈ Sticky loop 2396-2405 (10) with 65 candidates
2396 rplC_gene flipped: 5,193
2396 rplC_gene normal: 23,205
2397 rplC_gene symmetric: 67,134,140
2398 rplC_gene normal: 5,193
2398 rplC_gene flipped: 23,205
2399 rplC_gene flipped: 5,193
2399 rplC_gene normal: 23,205
2400 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2400 rplC_gene normal: 138
2401 rplC_gene normal: 62,63,123,159,208
2403 rplC_gene normal: 18,39,103,108,131,176,181,200
2403 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2404 rplC_gene normal: 35,91,110,133,151
π Sticky hub 2433-2444 (12) with 57 candidates
2434 rplC_gene normal: 15,68,82,90,118,127,156
2435 rplC_gene flipped: 63
2435 rplC_gene normal: 137
2436 rplC_gene flipped: 5,193
2436 rplC_gene normal: 23,205
2437 rplC_gene flipped: 45
2438 rplC_gene normal: 1,11,161,165
2438 rplC_gene flipped: 24,26,73,92,109,170,177,178
2440 rplC_gene symmetric: 89,183
2441 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2441 rplC_gene flipped: 15,68,82,90,118,127,156
2442 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2443 rplC_gene flipped: 143,152,194
π° Bump-2 2450-2451 with 14 candidates
2450 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2450 rplC_gene normal: 138
βοΈ Belt 2088-2254 - (14-pair stem - open loops: π° Bump-2 2102-2103, π± Sticky-3 2208-2210, πΈ Sticky five 2235-2239, π Bump-1 2249)
2089 rplC_gene symmetric: 9,50,60,155,207
2091 rplC_gene normal: 18,39,103,108,131,176,181,200
2091 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2092 rplC_gene normal: 35,91,110,133,151
2093 rplC_gene flipped: 15,68,82,90,118,127,156
2094 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2094 rplC_gene normal: 138
2096 rplC_gene flipped: 1,11,161,165
2096 rplC_gene normal: 24,26,73,92,109,170,177,178
2098 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2098 rplC_gene flipped: 138
2099 rplC_gene normal: 35,91,110,133,151
2101 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2103 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2103 rplC_gene normal: 15,68,82,90,118,127,156
2203 rplC_gene normal: 35,91,110,133,151
2204 rplC_gene flipped: 5,193
2204 rplC_gene normal: 40,79,84,100,186,187,188,201
2205 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2205 rplC_gene normal: 137
2207 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2210 rplC_gene flipped: 4
2229 rplC_gene symmetric: 16,21,113,139,145
2230 rplC_gene flipped: 18,39,103,108,131,176,181,200
2230 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2232 rplC_gene normal: 18,39,103,108,131,176,181,200
2232 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2233 rplC_gene normal: 5,193
2233 rplC_gene flipped: 23,205
2234 rplC_gene flipped: 5,193
2234 rplC_gene normal: 23,205
2239 rplC_gene flipped: 45
2241 rplC_gene flipped: 35,91,110,133,151
2242 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2242 rplC_gene normal: 138
2244 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2244 rplC_gene flipped: 138
2245 rplC_gene normal: 35,91,110,133,151
2246 rplC_gene flipped: 5,193
2246 rplC_gene normal: 40,79,84,100,186,187,188,201
2248 rplC_gene normal: 18,39,103,108,131,176,181,200
2248 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2249 rplC_gene normal: 5,193
2249 rplC_gene flipped: 23,205
2252 rplC_gene normal: 143,152,194
2253 rplC_gene symmetric: 33,83,124,141,179,184
2254 rplC_gene flipped: 143,152,194
π° Bump-2 2102-2103 with 9 candidates
2102 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
π± Sticky-3 2208-2210 with 5 candidates
2208 rplC_gene normal: 31,119,162,196
2209 rplC_gene flipped: 45
πΈ Sticky five 2235-2239 with 11 candidates
2235 rplC_gene symmetric: 67,134,140
2236 rplC_gene normal: 5,193
2236 rplC_gene flipped: 23,205
2238 rplC_gene flipped: 5,193
2238 rplC_gene normal: 23,205
βοΈ Belt 2104-2202 - (18-pair stem - open loops: πΈ Sticky loop 2122-2130 (9))
2104 rplC_gene flipped: 62,63,123,159,208
2105 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2105 rplC_gene flipped: 138
2106 rplC_gene normal: 35,91,110,133,151
2108 rplC_gene normal: 45
2109 rplC_gene symmetric: 16,21,113,139,145
2110 rplC_gene symmetric: 67,134,140
2111 rplC_gene symmetric: 16,21,113,139,145
2112 rplC_gene flipped: 45
2114 rplC_gene flipped: 63
2114 rplC_gene normal: 137
2115 rplC_gene normal: 63
2115 rplC_gene flipped: 137
2119 rplC_gene flipped: 63
2119 rplC_gene normal: 137
2120 rplC_gene flipped: 5,193
2120 rplC_gene normal: 23,205
2121 rplC_gene symmetric: 67,134,140
πΈ Sticky loop 2122-2130 (9) with 20 candidates
2122 rplC_gene normal: 5,193
2122 rplC_gene flipped: 23,205
2124 rplC_gene normal: 63
2124 rplC_gene flipped: 137
2126 rplC_gene flipped: 63
2126 rplC_gene normal: 137
2127 rplC_gene normal: 143,152,194
2128 rplC_gene flipped: 95,97,174,199
2129 rplC_gene flipped: 62,63,123,159,208
π Medium stem 2131-2207 - (5-pair stem - open loops: π° Bump-2 2136-2137, π Sticky hub 2173-2184 (12)
2131 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2131 rplC_gene flipped: 138
2132 rplC_gene normal: 35,91,110,133,151
2133 rplC_gene flipped: 15,68,82,90,118,127,156
2134 rplC_gene normal: 15,68,82,90,118,127,156
2135 rplC_gene flipped: 35,91,110,133,151
2137 rplC_gene symmetric: 16,21,113,139,145
2184 rplC_gene normal: 45
2185 rplC_gene symmetric: 16,21,113,139,145
2186 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2186 rplC_gene normal: 138
2188 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2188 rplC_gene flipped: 138
2189 rplC_gene normal: 35,91,110,133,151
2191 rplC_gene normal: 45
2192 rplC_gene symmetric: 16,21,113,139,145
2193 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2193 rplC_gene normal: 138
2194 rplC_gene normal: 62,63,123,159,208
2196 rplC_gene normal: 43
2197 rplC_gene flipped: 4
2198 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2198 rplC_gene normal: 138
2199 rplC_gene flipped: 13,46,59,77,128,169
2200 rplC_gene normal: 31,119,162,196
2201 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2201 rplC_gene normal: 138
2202 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2202 rplC_gene flipped: 138
π° Bump-2 2136-2137 with 3 candidates
2136 rplC_gene symmetric: 67,134,140
π Sticky hub 2173-2184 (12) with 83 candidates
2173 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2173 rplC_gene normal: 137
2174 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2174 rplC_gene flipped: 137
2175 rplC_gene symmetric: 9,50,60,155,207
2176 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2176 rplC_gene normal: 137
2178 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2178 rplC_gene normal: 15,68,82,90,118,127,156
2179 rplC_gene flipped: 62,63,123,159,208
2182 rplC_gene flipped: 4
2183 rplC_gene normal: 4
π Short stem 2138-2172 - 3-pair stem - open loops: πΈ Sticky loop 2141-2146 (6), π± Sticky-3 2167-2169
2138 rplC_gene symmetric: 67,134,140
2139 rplC_gene normal: 5,193
2139 rplC_gene flipped: 23,205
2140 rplC_gene normal: 63
2140 rplC_gene flipped: 137
2146 rplC_gene normal: 5,193
2146 rplC_gene flipped: 40,79,84,100,186,187,188,201
2170 rplC_gene normal: 4
2172 rplC_gene normal: 1,11,161,165
2172 rplC_gene flipped: 24,26,73,92,109,170,177,178
πΈ Sticky loop 2141-2146 (6) with 44 candidates
2141 rplC_gene flipped: 5,193
2141 rplC_gene normal: 40,79,84,100,186,187,188,201
2142 rplC_gene flipped: 13,46,59,77,128,169
2143 rplC_gene symmetric: 209
2144 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2145 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2145 rplC_gene flipped: 137
π± Sticky-3 2167-2169 with 12 candidates
2167 rplC_gene normal: 35,91,110,133,151
2168 rplC_gene flipped: 15,68,82,90,118,127,156
βοΈ Belt 2147-2166 - (8-pair stem - open loops: πΈ Sticky loop 2155-2158 (4))
2147 rplC_gene flipped: 35,91,110,133,151
2148 rplC_gene flipped: 18,39,103,108,131,176,181,200
2148 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2150 rplC_gene normal: 18,39,103,108,131,176,181,200
2150 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2151 rplC_gene flipped: 31,119,162,196
2152 rplC_gene normal: 13,46,59,77,128,169
2153 rplC_gene flipped: 1,11,161,165
2153 rplC_gene normal: 24,26,73,92,109,170,177,178
2154 rplC_gene normal: 45
2158 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2159 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2160 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2161 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2162 rplC_gene flipped: 5,193
2162 rplC_gene normal: 40,79,84,100,186,187,188,201
2163 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2163 rplC_gene normal: 137
2164 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2164 rplC_gene normal: 15,68,82,90,118,127,156
2165 rplC_gene flipped: 62,63,123,159,208
2166 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2166 rplC_gene flipped: 138
πΈ Sticky loop 2155-2158 (4) with 6 candidates
2155 rplC_gene normal: 5,193
2155 rplC_gene flipped: 23,205
2156 rplC_gene normal: 63
2156 rplC_gene flipped: 137
π Short stem 2211-2228 - 3-pair stem - open loops: π Bump-1 2214
2211 rplC_gene normal: 4
2212 rplC_gene flipped: 43
2213 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2213 rplC_gene flipped: 15,68,82,90,118,127,156
2214 rplC_gene normal: 19,44,66,72,76,87,111,153,158
π Medium stem 2215-2234 - (6-pair stem - open loops: πΈ Sticky five 2221-2225
2215 rplC_gene flipped: 143,152,194
2217 rplC_gene flipped: 5,193
2217 rplC_gene normal: 23,205
2218 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2218 rplC_gene normal: 138
2219 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2219 rplC_gene flipped: 138
2220 rplC_gene flipped: 31,119,162,196
2226 rplC_gene normal: 5,193
2226 rplC_gene flipped: 40,79,84,100,186,187,188,201
2227 rplC_gene flipped: 35,91,110,133,151
2228 rplC_gene symmetric: 67,134,140
πΈ Sticky five 2221-2225 with 21 candidates
2221 rplC_gene symmetric: 33,83,124,141,179,184
2222 rplC_gene flipped: 143,152,194
2223 rplC_gene normal: 63
2223 rplC_gene flipped: 137
2224 rplC_gene flipped: 5,193
2224 rplC_gene normal: 40,79,84,100,186,187,188,201
π Medium stem 2257-2269 - (5-pair stem - open loops: π± Sticky-3 2262-2264
2258 rplC_gene symmetric: 89,183
2259 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2259 rplC_gene flipped: 15,68,82,90,118,127,156
2260 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2260 rplC_gene normal: 15,68,82,90,118,127,156
2261 rplC_gene symmetric: 89,183
2264 rplC_gene normal: 43
2265 rplC_gene flipped: 4
2267 rplC_gene normal: 15,68,82,90,118,127,156
2268 rplC_gene symmetric: 21,113,139,145
π± Sticky-3 2262-2264 with 34 candidates
2262 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2262 rplC_gene flipped: 15,68,82,90,118,127,156
2263 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2263 rplC_gene normal: 15,68,82,90,118,127,156
π Medium stem 2270-2292 - (6-pair stem - open loops: π Sticky hub 2276-2286 (11)
2270 rplC_gene flipped: 35,91,110,133,151
2271 rplC_gene flipped: 45
2272 rplC_gene flipped: 4
2273 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2273 rplC_gene normal: 138
2274 rplC_gene flipped: 13,46,59,77,128,169
2275 rplC_gene flipped: 143,152,194
2286 rplC_gene flipped: 15,68,82,90,118,127,156
2287 rplC_gene normal: 15,68,82,90,118,127,156
2288 rplC_gene flipped: 63
2288 rplC_gene normal: 137
2289 rplC_gene flipped: 5,193
2289 rplC_gene normal: 23,205
2290 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2290 rplC_gene normal: 138
2291 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2291 rplC_gene flipped: 138
2292 rplC_gene normal: 5,193
2292 rplC_gene flipped: 23,205
π Sticky hub 2276-2286 (11) with 51 candidates
2276 rplC_gene normal: 63
2276 rplC_gene flipped: 137
2278 rplC_gene flipped: 63
2278 rplC_gene normal: 137
2279 rplC_gene normal: 63
2279 rplC_gene flipped: 137
2281 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2282 rplC_gene normal: 13,46,59,77,128,169
2283 rplC_gene symmetric: 9,50,60,155,207
2284 rplC_gene flipped: 13,46,59,77,128,169
2285 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π Short stem 2295-2395 - 2-pair stem - open loops: π° Bump-2 2297-2298, π° Bump-2 2356-2357, π Bump-1 2382, π Bump-1 2393
2295 rplC_gene normal: 43
2296 rplC_gene flipped: 4
2298 rplC_gene flipped: 43
2357 rplC_gene flipped: 5,193
2357 rplC_gene normal: 40,79,84,100,186,187,188,201
2382 rplC_gene flipped: 5,193
2382 rplC_gene normal: 23,205
2393 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2393 rplC_gene flipped: 15,68,82,90,118,127,156
2394 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2395 rplC_gene flipped: 143,152,194
π° Bump-2 2297-2298 with 1 candidates
2297 rplC_gene normal: 4
π° Bump-2 2356-2357 with 5 candidates
2356 rplC_gene normal: 35,91,110,133,151
βοΈ Belt 2299-2355 - (10-pair stem - open loops: π Bump-1 2309, π± Sticky-3 2329-2331, π Sticky hub 2334-2347 (14))
2299 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2299 rplC_gene flipped: 15,68,82,90,118,127,156
2300 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2300 rplC_gene normal: 15,68,82,90,118,127,156
2301 rplC_gene normal: 18,39,103,108,131,176,181,200
2301 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2302 rplC_gene normal: 5,193
2302 rplC_gene flipped: 23,205
2303 rplC_gene flipped: 5,193
2303 rplC_gene normal: 23,205
2304 rplC_gene flipped: 18,39,103,108,131,176,181,200
2304 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2305 rplC_gene normal: 95,97,174,199
2306 rplC_gene flipped: 143,152,194
2307 rplC_gene normal: 63
2307 rplC_gene flipped: 137
2308 rplC_gene flipped: 5,193
2308 rplC_gene normal: 40,79,84,100,186,187,188,201
2331 rplC_gene normal: 13,46,59,77,128,169
2332 rplC_gene flipped: 1,11,161,165
2332 rplC_gene normal: 24,26,73,92,109,170,177,178
2347 rplC_gene normal: 18,39,103,108,131,176,181,200
2347 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2348 rplC_gene flipped: 31,119,162,196
2349 rplC_gene symmetric: 33,83,124,141,179,184
2350 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2352 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2353 rplC_gene symmetric: 33,83,124,141,179,184
2354 rplC_gene normal: 31,119,162,196
2355 rplC_gene symmetric: 67,134,140
π± Sticky-3 2329-2331 with 7 candidates
2329 rplC_gene normal: 5,193
2329 rplC_gene flipped: 23,205
2330 rplC_gene normal: 143,152,194
π Sticky hub 2334-2347 (14) with 119 candidates
2334 rplC_gene flipped: 4
2335 rplC_gene normal: 15,68,82,90,118,127,156
2336 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2337 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2338 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2338 rplC_gene flipped: 137
2339 rplC_gene normal: 5,193
2339 rplC_gene flipped: 40,79,84,100,186,187,188,201
2340 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2341 rplC_gene flipped: 95,97,174,199
2342 rplC_gene flipped: 62,63,123,159,208
2343 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2343 rplC_gene flipped: 138
2344 rplC_gene normal: 35,91,110,133,151
2345 rplC_gene flipped: 5,193
2345 rplC_gene normal: 40,79,84,100,186,187,188,201
π Medium stem 2310-2328 - (6-pair stem - open loops: πΈ Sticky loop 2316-2322 (7)
2310 rplC_gene flipped: 1,11,161,165
2310 rplC_gene normal: 24,26,73,92,109,170,177,178
2311 rplC_gene flipped: 43
2313 rplC_gene normal: 5,193
2313 rplC_gene flipped: 40,79,84,100,186,187,188,201
2314 rplC_gene flipped: 63
2314 rplC_gene normal: 137
2315 rplC_gene normal: 63
2315 rplC_gene flipped: 137
2322 rplC_gene flipped: 35,91,110,133,151
2323 rplC_gene symmetric: 67,134,140
2324 rplC_gene flipped: 31,119,162,196
2325 rplC_gene normal: 13,46,59,77,128,169
2326 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
2326 rplC_gene flipped: 138
2327 rplC_gene normal: 4
2328 rplC_gene normal: 45
πΈ Sticky loop 2316-2322 (7) with 28 candidates
2317 rplC_gene flipped: 63
2317 rplC_gene normal: 137
2318 rplC_gene flipped: 5,193
2318 rplC_gene normal: 23,205
2319 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2319 rplC_gene normal: 138
βοΈ Belt 2358-2381 - (9-pair stem - open loops: πΈ Sticky loop 2367-2372 (6))
2358 rplC_gene flipped: 13,46,59,77,128,169
2359 rplC_gene flipped: 143,152,194
2360 rplC_gene normal: 143,152,194
2361 rplC_gene symmetric: 33,83,124,141,179,184
2362 rplC_gene symmetric: 209
2363 rplC_gene symmetric: 33,83,124,141,179,184
2364 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2366 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2372 rplC_gene flipped: 31,119,162,196
2373 rplC_gene symmetric: 33,83,124,141,179,184
2374 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2375 rplC_gene flipped: 15,68,82,90,118,127,156
2377 rplC_gene normal: 15,68,82,90,118,127,156
2378 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2379 rplC_gene normal: 13,46,59,77,128,169
2380 rplC_gene normal: 5,193
2380 rplC_gene flipped: 40,79,84,100,186,187,188,201
2381 rplC_gene flipped: 63
2381 rplC_gene normal: 137
πΈ Sticky loop 2367-2372 (6) with 25 candidates
2367 rplC_gene normal: 13,46,59,77,128,169
2368 rplC_gene normal: 5,193
2368 rplC_gene flipped: 40,79,84,100,186,187,188,201
2369 rplC_gene flipped: 63
2369 rplC_gene normal: 137
2370 rplC_gene flipped: 5,193
2370 rplC_gene normal: 23,205
2371 rplC_gene symmetric: 67,134,140
π Short stem 2383-2392 - 3-pair stem - open loops: πΈ Sticky loop 2386-2389 (4)
2383 rplC_gene flipped: 18,39,103,108,131,176,181,200
2383 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2385 rplC_gene flipped: 1,11,161,165
2385 rplC_gene normal: 24,26,73,92,109,170,177,178
2389 rplC_gene symmetric: 67,134,140
2390 rplC_gene normal: 35,91,110,133,151
2392 rplC_gene flipped: 43
πΈ Sticky loop 2386-2389 (4) with 5 candidates
2388 rplC_gene flipped: 35,91,110,133,151
βοΈ Belt 2406-2430 - (7-pair stem - open loops: π Bump-1 2413)
2406 rplC_gene normal: 4
2407 rplC_gene normal: 45
2408 rplC_gene normal: 5,193
2408 rplC_gene flipped: 23,205
2409 rplC_gene normal: 63
2409 rplC_gene flipped: 137
2410 rplC_gene flipped: 15,68,82,90,118,127,156
2411 rplC_gene normal: 15,68,82,90,118,127,156
2412 rplC_gene flipped: 63
2412 rplC_gene normal: 137
π Short stem 2414-2432 - 2-pair stem - open loops: πΈ Sticky loop 2416-2423 (8)
2414 rplC_gene normal: 143,152,194
2415 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2424 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
2424 rplC_gene flipped: 138
2425 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2425 rplC_gene normal: 138
2426 rplC_gene flipped: 13,46,59,77,128,169
2427 rplC_gene flipped: 143,152,194
2428 rplC_gene normal: 63
2428 rplC_gene flipped: 137
πΈ Sticky loop 2416-2423 (8) with 42 candidates
2416 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2416 rplC_gene flipped: 137
2417 rplC_gene flipped: 1,11,161,165
2417 rplC_gene normal: 24,26,73,92,109,170,177,178
2418 rplC_gene flipped: 43
2419 rplC_gene normal: 95,97,174,199
2420 rplC_gene symmetric: 209
2421 rplC_gene flipped: 95,97,174,199
2422 rplC_gene symmetric: 89,183
π Medium stem 2464-2510 - (5-pair stem - open loops: π Bump-1 2469, π° Bump-2 2503-2504, π Bump-1 2508
2464 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2466 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2466 rplC_gene flipped: 137
2467 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
2467 rplC_gene flipped: 138
2468 rplC_gene normal: 15,68,82,90,118,127,156
2469 rplC_gene symmetric: 21,113,139,145
2504 rplC_gene symmetric: 16,21,113,139,145
2505 rplC_gene flipped: 18,39,103,108,131,176,181,200
2505 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2506 rplC_gene normal: 95,97,174,199
2507 rplC_gene flipped: 143,152,194
2508 rplC_gene normal: 143,152,194
2509 rplC_gene flipped: 95,97,174,199
2510 rplC_gene symmetric: 89,183
π° Bump-2 2503-2504 with 1 candidates
2503 rplC_gene normal: 45
βοΈ Belt 2470-2502 - (8-pair stem - open loops: π± Sticky-3 2478-2480, π± Sticky-3 2492-2494)
2471 rplC_gene flipped: 35,91,110,133,151
2472 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2472 rplC_gene normal: 138
2473 rplC_gene normal: 62,63,123,159,208
2475 rplC_gene flipped: 1,11,161,165
2475 rplC_gene normal: 24,26,73,92,109,170,177,178
2480 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2494 rplC_gene normal: 143,152,194
2495 rplC_gene normal: 13,46,59,77,128,169
2496 rplC_gene symmetric: 9,50,60,155,207
2497 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2497 rplC_gene normal: 137
2498 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2498 rplC_gene normal: 15,68,82,90,118,127,156
2499 rplC_gene symmetric: 89,183
2500 rplC_gene normal: 95,97,174,199
2501 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π± Sticky-3 2478-2480 with 5 candidates
2478 rplC_gene flipped: 43
2479 rplC_gene normal: 95,97,174,199
π± Sticky-3 2492-2494 with 26 candidates
2492 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2492 rplC_gene flipped: 138
2493 rplC_gene normal: 5,193
2493 rplC_gene flipped: 23,205
π Short stem 2481-2491 - 2-pair stem - open loops: πΈ Sticky loop 2483-2489 (7)
2481 rplC_gene flipped: 5,193
2481 rplC_gene normal: 40,79,84,100,186,187,188,201
2482 rplC_gene flipped: 13,46,59,77,128,169
2489 rplC_gene symmetric: 16,21,113,139,145
2490 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2490 rplC_gene normal: 138
πΈ Sticky loop 2483-2489 (7) with 22 candidates
2483 rplC_gene flipped: 143,152,194
2484 rplC_gene normal: 143,152,194
2485 rplC_gene symmetric: 33,83,124,141,179,184
2486 rplC_gene flipped: 143,152,194
2487 rplC_gene flipped: 5,193
2487 rplC_gene normal: 23,205
2488 rplC_gene symmetric: 67,134,140
βοΈ Belt 2518-2593 - (11-pair stem - open loops: π° Bump-2 2529-2530, π Bump-1 2557, πΈ Sticky five 2573-2577, π° Bump-2 2583-2584, π° Bump-2 2586-2587, π Bump-1 2592)
2518 rplC_gene flipped: 43
2519 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2519 rplC_gene flipped: 15,68,82,90,118,127,156
2520 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2520 rplC_gene normal: 15,68,82,90,118,127,156
2521 rplC_gene normal: 18,39,103,108,131,176,181,200
2521 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2522 rplC_gene normal: 5,193
2522 rplC_gene flipped: 23,205
2525 rplC_gene normal: 143,152,194
2526 rplC_gene flipped: 95,97,174,199
2527 rplC_gene normal: 18,39,103,108,131,176,181,200
2527 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2528 rplC_gene normal: 35,91,110,133,151
2530 rplC_gene normal: 15,68,82,90,118,127,156
2557 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2577 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2578 rplC_gene flipped: 95,97,174,199
2579 rplC_gene normal: 18,39,103,108,131,176,181,200
2579 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2580 rplC_gene normal: 5,193
2580 rplC_gene flipped: 23,205
2582 rplC_gene flipped: 5,193
2582 rplC_gene normal: 23,205
2587 rplC_gene symmetric: 21,113,139,145
2588 rplC_gene flipped: 15,68,82,90,118,127,156
2589 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2589 rplC_gene normal: 138
2590 rplC_gene flipped: 13,46,59,77,128,169
2591 rplC_gene normal: 31,119,162,196
2592 rplC_gene flipped: 18,39,103,108,131,176,181,200
2592 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2593 rplC_gene normal: 95,97,174,199
π° Bump-2 2529-2530 with 7 candidates
2529 rplC_gene flipped: 15,68,82,90,118,127,156
πΈ Sticky five 2573-2577 with 21 candidates
2573 rplC_gene symmetric: 209
2574 rplC_gene symmetric: 33,83,124,141,179,184
2575 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π° Bump-2 2583-2584 with 22 candidates
2583 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2583 rplC_gene normal: 138
βοΈ Belt 2531-2556 - (10-pair stem - open loops: πΈ Sticky loop 2541-2544 (4), π° Bump-2 2553-2554)
2531 rplC_gene flipped: 35,91,110,133,151
2532 rplC_gene flipped: 45
2534 rplC_gene flipped: 63
2534 rplC_gene normal: 137
2535 rplC_gene flipped: 5,193
2535 rplC_gene normal: 23,205
2536 rplC_gene flipped: 18,39,103,108,131,176,181,200
2536 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2537 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2537 rplC_gene flipped: 15,68,82,90,118,127,156
2539 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2539 rplC_gene flipped: 137
2540 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
2540 rplC_gene flipped: 138
2544 rplC_gene flipped: 5,193
2544 rplC_gene normal: 23,205
2545 rplC_gene flipped: 45
2547 rplC_gene normal: 45
2548 rplC_gene normal: 5,193
2548 rplC_gene flipped: 23,205
2549 rplC_gene normal: 143,152,194
2550 rplC_gene flipped: 95,97,174,199
2551 rplC_gene normal: 18,39,103,108,131,176,181,200
2551 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2552 rplC_gene symmetric: 16,21,113,139,145
2554 rplC_gene normal: 62,63,123,159,208
2555 rplC_gene normal: 95,97,174,199
2556 rplC_gene symmetric: 209
πΈ Sticky loop 2541-2544 (4) with 9 candidates
2541 rplC_gene normal: 15,68,82,90,118,127,156
2542 rplC_gene flipped: 63
2542 rplC_gene normal: 137
π° Bump-2 2553-2554 with 22 candidates
2553 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2553 rplC_gene normal: 138
π Medium stem 2558-2572 - (5-pair stem - open loops: πΈ Sticky five 2563-2567
2558 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2558 rplC_gene flipped: 137
2559 rplC_gene flipped: 1,11,161,165
2559 rplC_gene normal: 24,26,73,92,109,170,177,178
2567 rplC_gene symmetric: 67,134,140
2568 rplC_gene normal: 5,193
2568 rplC_gene flipped: 23,205
2569 rplC_gene flipped: 5,193
2569 rplC_gene normal: 23,205
2570 rplC_gene flipped: 45
2571 rplC_gene normal: 1,11,161,165
2571 rplC_gene flipped: 24,26,73,92,109,170,177,178
2572 rplC_gene flipped: 13,46,59,77,128,169
πΈ Sticky five 2563-2567 with 13 candidates
2563 rplC_gene flipped: 4
2565 rplC_gene normal: 15,68,82,90,118,127,156
2566 rplC_gene flipped: 35,91,110,133,151
βοΈ Belt 2599-2617 - (7-pair stem - open loops: πΈ Sticky loop 2606-2609 (4), π Bump-1 2613)
2599 rplC_gene flipped: 5,193
2599 rplC_gene normal: 40,79,84,100,186,187,188,201
2601 rplC_gene normal: 5,193
2601 rplC_gene flipped: 40,79,84,100,186,187,188,201
2602 rplC_gene flipped: 35,91,110,133,151
2603 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2603 rplC_gene normal: 138
2604 rplC_gene normal: 62,63,123,159,208
2605 rplC_gene normal: 95,97,174,199
2609 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2609 rplC_gene flipped: 15,68,82,90,118,127,156
2611 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2611 rplC_gene normal: 15,68,82,90,118,127,156
2612 rplC_gene normal: 43
2614 rplC_gene flipped: 43
2616 rplC_gene normal: 18,39,103,108,131,176,181,200
2616 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2617 rplC_gene flipped: 31,119,162,196
πΈ Sticky loop 2606-2609 (4) with 25 candidates
2606 rplC_gene flipped: 143,152,194
2607 rplC_gene flipped: 5,193
2607 rplC_gene normal: 23,205
2608 rplC_gene flipped: 18,39,103,108,131,176,181,200
2608 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
βοΈ Belt 2641-2799 - (8-pair stem - open loops: π° Bump-2 2649-2650, πΈ Sticky loop 2786-2791 (6))
2644 rplC_gene normal: 143,152,194
2645 rplC_gene flipped: 95,97,174,199
2646 rplC_gene normal: 18,39,103,108,131,176,181,200
2646 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2647 rplC_gene flipped: 31,119,162,196
2648 rplC_gene flipped: 95,97,174,199
2650 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2650 rplC_gene flipped: 15,68,82,90,118,127,156
2791 rplC_gene flipped: 5,193
2791 rplC_gene normal: 40,79,84,100,186,187,188,201
2792 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2792 rplC_gene normal: 137
2794 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2794 rplC_gene normal: 15,68,82,90,118,127,156
2795 rplC_gene flipped: 62,63,123,159,208
2798 rplC_gene flipped: 4
2799 rplC_gene normal: 15,68,82,90,118,127,156
π° Bump-2 2649-2650 with 2 candidates
2649 rplC_gene symmetric: 89,183
πΈ Sticky loop 2786-2791 (6) with 57 candidates
2786 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2786 rplC_gene flipped: 15,68,82,90,118,127,156
2788 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2788 rplC_gene normal: 15,68,82,90,118,127,156
2789 rplC_gene normal: 18,39,103,108,131,176,181,200
2789 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2790 rplC_gene normal: 35,91,110,133,151
π Medium stem 2651-2785 - (4-pair stem - open loops: π° Bump-2 2655-2656, π° Bump-2 2744-2745, π Bump-1 2781
2651 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2651 rplC_gene normal: 15,68,82,90,118,127,156
2652 rplC_gene normal: 43
2654 rplC_gene flipped: 35,91,110,133,151
2656 rplC_gene normal: 1,11,161,165
2656 rplC_gene flipped: 24,26,73,92,109,170,177,178
2745 rplC_gene normal: 18,39,103,108,131,176,181,200
2745 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2781 rplC_gene flipped: 35,91,110,133,151
2782 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2782 rplC_gene normal: 138
2783 rplC_gene normal: 62,63,123,159,208
2785 rplC_gene symmetric: 89,183
π° Bump-2 2655-2656 with 1 candidates
2655 rplC_gene flipped: 45
π° Bump-2 2744-2745 with 4 candidates
2744 rplC_gene flipped: 95,97,174,199
βοΈ Belt 2657-2685 - (7-pair stem - open loops: π± Sticky-3 2664-2666, π° Bump-2 2677-2678)
2657 rplC_gene flipped: 13,46,59,77,128,169
2658 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2660 rplC_gene symmetric: 21,113,139,145
2662 rplC_gene flipped: 63
2662 rplC_gene normal: 137
2663 rplC_gene normal: 63
2663 rplC_gene flipped: 137
2666 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2678 rplC_gene flipped: 1,11,161,165
2678 rplC_gene normal: 24,26,73,92,109,170,177,178
2679 rplC_gene flipped: 43
2681 rplC_gene symmetric: 9,50,60,155,207
2683 rplC_gene normal: 18,39,103,108,131,176,181,200
2683 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2684 rplC_gene normal: 5,193
2684 rplC_gene flipped: 23,205
2685 rplC_gene flipped: 5,193
2685 rplC_gene normal: 23,205
π± Sticky-3 2664-2666 with 28 candidates
2664 rplC_gene flipped: 5,193
2664 rplC_gene normal: 40,79,84,100,186,187,188,201
2665 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2665 rplC_gene normal: 137
π° Bump-2 2677-2678 with 6 candidates
2677 rplC_gene normal: 13,46,59,77,128,169
π Short stem 2667-2676 - 3-pair stem - open loops: πΈ Sticky loop 2670-2673 (4)
2667 rplC_gene flipped: 143,152,194
2668 rplC_gene normal: 63
2668 rplC_gene flipped: 137
2673 rplC_gene normal: 63
2673 rplC_gene flipped: 137
2674 rplC_gene flipped: 5,193
2674 rplC_gene normal: 40,79,84,100,186,187,188,201
2675 rplC_gene flipped: 13,46,59,77,128,169
2676 rplC_gene symmetric: 209
πΈ Sticky loop 2670-2673 (4) with 12 candidates
2670 rplC_gene flipped: 35,91,110,133,151
2671 rplC_gene symmetric: 67,134,140
2672 rplC_gene normal: 5,193
2672 rplC_gene flipped: 23,205
π Medium stem 2686-2743 - (6-pair stem - open loops: π± Sticky-3 2692-2694, π Bump-1 2737
2686 rplC_gene symmetric: 67,134,140
2687 rplC_gene symmetric: 16,21,113,139,145
2688 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2688 rplC_gene normal: 138
2689 rplC_gene normal: 62,63,123,159,208
2690 rplC_gene normal: 95,97,174,199
2691 rplC_gene flipped: 143,152,194
2694 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2694 rplC_gene normal: 138
2739 rplC_gene flipped: 4
2740 rplC_gene normal: 15,68,82,90,118,127,156
2741 rplC_gene flipped: 35,91,110,133,151
2742 rplC_gene symmetric: 67,134,140
2743 rplC_gene flipped: 31,119,162,196
π± Sticky-3 2692-2694 with 4 candidates
2693 rplC_gene flipped: 5,193
2693 rplC_gene normal: 23,205
π Short stem 2695-2736 - 3-pair stem - open loops: πΈ Sticky loop 2698-2701 (4), πΈ Sticky loop 2730-2733 (4)
2695 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2695 rplC_gene flipped: 138
2696 rplC_gene symmetric: 16,21,113,139,145
2697 rplC_gene flipped: 18,39,103,108,131,176,181,200
2697 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2701 rplC_gene flipped: 31,119,162,196
2733 rplC_gene normal: 15,68,82,90,118,127,156
2734 rplC_gene symmetric: 21,113,139,145
2736 rplC_gene symmetric: 21,113,139,145
πΈ Sticky loop 2698-2701 (4) with 13 candidates
2699 rplC_gene flipped: 1,11,161,165
2699 rplC_gene normal: 24,26,73,92,109,170,177,178
2700 rplC_gene normal: 45
πΈ Sticky loop 2730-2733 (4) with 12 candidates
2730 rplC_gene flipped: 143,152,194
2731 rplC_gene normal: 63
2731 rplC_gene flipped: 137
2732 rplC_gene flipped: 15,68,82,90,118,127,156
βοΈ Belt 2702-2729 - (11-pair stem - open loops: πΈ Sticky loop 2713-2716 (4), π° Bump-2 2723-2724)
2702 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2703 rplC_gene normal: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2703 rplC_gene flipped: 137
2704 rplC_gene normal: 20,29,34,37,98,104,107,122,142,172,180,189,203
2704 rplC_gene flipped: 138
2705 rplC_gene normal: 4
2706 rplC_gene normal: 45
2707 rplC_gene normal: 5,193
2707 rplC_gene flipped: 23,205
2708 rplC_gene normal: 143,152,194
2709 rplC_gene normal: 13,46,59,77,128,169
2710 rplC_gene symmetric: 9,50,60,155,207
2712 rplC_gene normal: 18,39,103,108,131,176,181,200
2712 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2716 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2717 rplC_gene flipped: 143,152,194
2718 rplC_gene flipped: 5,193
2718 rplC_gene normal: 23,205
2719 rplC_gene flipped: 45
2721 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2722 rplC_gene flipped: 95,97,174,199
2724 rplC_gene flipped: 4
2726 rplC_gene normal: 4
2727 rplC_gene normal: 45
2728 rplC_gene flipped: 31,119,162,196
2729 rplC_gene symmetric: 33,83,124,141,179,184
πΈ Sticky loop 2713-2716 (4) with 13 candidates
2713 rplC_gene flipped: 31,119,162,196
2714 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
π° Bump-2 2723-2724 with 1 candidates
2723 rplC_gene normal: 43
π Short stem 2746-2780 - 3-pair stem - open loops: πΈ Sticky loop 2749-2752 (4), πΈ Sticky loop 2774-2777 (4)
2746 rplC_gene normal: 35,91,110,133,151
2747 rplC_gene flipped: 15,68,82,90,118,127,156
2752 rplC_gene flipped: 1,11,161,165
2752 rplC_gene normal: 24,26,73,92,109,170,177,178
2778 rplC_gene normal: 45
2779 rplC_gene normal: 35,91,110,133,151
πΈ Sticky loop 2749-2752 (4) with 27 candidates
2749 rplC_gene normal: 15,68,82,90,118,127,156
2750 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2751 rplC_gene normal: 13,46,59,77,128,169
πΈ Sticky loop 2774-2777 (4) with 18 candidates
2774 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2776 rplC_gene symmetric: 21,113,139,145
π Medium stem 2753-2773 - (5-pair stem - open loops: π Sticky hub 2758-2768 (11)
2753 rplC_gene flipped: 43
2755 rplC_gene normal: 43
2756 rplC_gene flipped: 4
2757 rplC_gene normal: 15,68,82,90,118,127,156
2768 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2768 rplC_gene flipped: 138
2769 rplC_gene flipped: 31,119,162,196
2770 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2773 rplC_gene normal: 19,44,66,72,76,87,111,153,158
π Sticky hub 2758-2768 (11) with 71 candidates
2758 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2759 rplC_gene normal: 13,46,59,77,128,169
2760 rplC_gene symmetric: 9,50,60,155,207
2761 rplC_gene flipped: 13,46,59,77,128,169
2762 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2763 rplC_gene flipped: 15,68,82,90,118,127,156
2765 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2765 rplC_gene normal: 138
2767 rplC_gene flipped: 62,63,123,159,208
π Medium stem 2802-2816 - (6-pair stem - open loops: π± Sticky-3 2808-2810
2802 rplC_gene flipped: 5,193
2802 rplC_gene normal: 23,205
2803 rplC_gene flipped: 18,39,103,108,131,176,181,200
2803 rplC_gene normal: 36,49,80,94,125,130,148,150,164,173
2804 rplC_gene normal: 12,25,51,52,61,112,121,129,171,197
2804 rplC_gene flipped: 15,68,82,90,118,127,156
2805 rplC_gene flipped: 12,25,51,52,61,112,121,129,171,197
2805 rplC_gene normal: 15,68,82,90,118,127,156
2806 rplC_gene normal: 18,39,103,108,131,176,181,200
2806 rplC_gene flipped: 36,49,80,94,125,130,148,150,164,173
2807 rplC_gene normal: 35,91,110,133,151
2810 rplC_gene flipped: 63
2810 rplC_gene normal: 137
2811 rplC_gene normal: 63
2811 rplC_gene flipped: 137
2812 rplC_gene flipped: 15,68,82,90,118,127,156
2813 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2813 rplC_gene normal: 138
2814 rplC_gene flipped: 13,46,59,77,128,169
2815 rplC_gene normal: 31,119,162,196
2816 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2816 rplC_gene normal: 138
π± Sticky-3 2808-2810 with 14 candidates
2808 rplC_gene flipped: 15,68,82,90,118,127,156
2809 rplC_gene normal: 15,68,82,90,118,127,156
βοΈ Belt 2822-2900 - (9-pair stem - open loops: πΈ Sticky loop 2831-2837 (7), πΈ Sticky loop 2843-2846 (4), π± Sticky-3 2894-2896)
2822 rplC_gene flipped: 5,193
2822 rplC_gene normal: 40,79,84,100,186,187,188,201
2823 rplC_gene flipped: 13,46,59,77,128,169
2824 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2825 rplC_gene flipped: 5,193
2825 rplC_gene normal: 40,79,84,100,186,187,188,201
2826 rplC_gene flipped: 13,46,59,77,128,169
2827 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2828 rplC_gene flipped: 5,193
2828 rplC_gene normal: 40,79,84,100,186,187,188,201
2829 rplC_gene flipped: 13,46,59,77,128,169
2830 rplC_gene normal: 31,119,162,196
2837 rplC_gene flipped: 63
2837 rplC_gene normal: 137
2838 rplC_gene normal: 143,152,194
2839 rplC_gene flipped: 19,44,66,72,76,87,111,153,158
2840 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2841 rplC_gene flipped: 143,152,194
2846 rplC_gene symmetric: 67,134,140
2896 rplC_gene flipped: 62,63,123,159,208
2898 rplC_gene flipped: 4
2899 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2899 rplC_gene normal: 138
2900 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2900 rplC_gene normal: 137
πΈ Sticky loop 2831-2837 (7) with 49 candidates
2831 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2831 rplC_gene normal: 138
2832 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2832 rplC_gene flipped: 138
2833 rplC_gene normal: 35,91,110,133,151
πΈ Sticky loop 2843-2846 (4) with 12 candidates
2843 rplC_gene flipped: 5,193
2843 rplC_gene normal: 23,205
2844 rplC_gene symmetric: 67,134,140
2845 rplC_gene symmetric: 16,21,113,139,145
π± Sticky-3 2894-2896 with 7 candidates
2894 rplC_gene normal: 143,152,194
2895 rplC_gene flipped: 95,97,174,199
βοΈ Belt 2847-2893 - (11-pair stem - open loops: π° Bump-2 2858-2859, π± Sticky-3 2878-2880, π Bump-1 2884, π Bump-1 2890)
2847 rplC_gene symmetric: 16,21,113,139,145
2848 rplC_gene flipped: 45
2849 rplC_gene flipped: 4
2850 rplC_gene normal: 15,68,82,90,118,127,156
2851 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2852 rplC_gene symmetric: 33,83,124,141,179,184
2853 rplC_gene symmetric: 209
2854 rplC_gene normal: 13,46,59,77,128,169
2855 rplC_gene normal: 5,193
2855 rplC_gene flipped: 40,79,84,100,186,187,188,201
2856 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2857 rplC_gene symmetric: 33,83,124,141,179,184
2873 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2873 rplC_gene normal: 137
2874 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2875 rplC_gene flipped: 143,152,194
2876 rplC_gene flipped: 5,193
2876 rplC_gene normal: 23,205
2877 rplC_gene flipped: 45
2880 rplC_gene normal: 43
2881 rplC_gene flipped: 4
2882 rplC_gene normal: 4
2883 rplC_gene normal: 45
2884 rplC_gene normal: 35,91,110,133,151
2885 rplC_gene flipped: 15,68,82,90,118,127,156
2886 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2886 rplC_gene normal: 138
2887 rplC_gene flipped: 3,6,10,53,78,93,115,117,120,135,144,147,163,166,191,195,198
2887 rplC_gene normal: 137
2888 rplC_gene normal: 19,44,66,72,76,87,111,153,158
2889 rplC_gene normal: 31,119,162,196
2890 rplC_gene symmetric: 67,134,140
2891 rplC_gene normal: 35,91,110,133,151
2893 rplC_gene flipped: 63
2893 rplC_gene normal: 137
π° Bump-2 2858-2859 with 14 candidates
2858 rplC_gene normal: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
π± Sticky-3 2878-2880 with 12 candidates
2878 rplC_gene normal: 1,11,161,165
2878 rplC_gene flipped: 24,26,73,92,109,170,177,178
π Short stem 2860-2872 - 1-pair stem - open loops: π° Bump-2 2861-2862
2860 rplC_gene normal: 45
2862 rplC_gene symmetric: 33,83,124,141,179,184
π° Bump-2 2861-2862 with 4 candidates
2861 rplC_gene flipped: 31,119,162,196
π Medium stem 2863-2877 - (5-pair stem - open loops: πΈ Sticky loop 2868-2871 (4)
2863 rplC_gene normal: 31,119,162,196
2864 rplC_gene flipped: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2864 rplC_gene normal: 138
2865 rplC_gene normal: 20,29,32,34,37,42,58,98,104,107,122,126,136,142,149,167,172,180,185,189,203
2865 rplC_gene flipped: 138
2866 rplC_gene normal: 35,91,110,133,151
2871 rplC_gene flipped: 4
2872 rplC_gene flipped: 20,29,34,37,98,104,107,122,142,172,180,189,203
2872 rplC_gene normal: 138
πΈ Sticky loop 2868-2871 (4) with 19 candidates
2868 rplC_gene flipped: 41,47,54,57,65,69,71,75,85,102,132,182,192,206
2869 rplC_gene flipped: 95,97,174,199
2870 rplC_gene normal: 43
============================================================
π JOURNEY SUMMARY:
π Bridge structures (stem pairs): 155
π Terminal stations (loops): 311
ποΈ Longest bridge: 18 base pairs
π Largest terminal: 20 nucleotides
π― POTENTIAL BINDING HOTSPOTS:
π Look for terminals >10 nt (protein landing zones)
π Check bulges 1-3 nt (fine-tuning sites)
π Monitor bridge intersections (assembly checkpoints)
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