rpsH GENE
rpsH
Gene type: protein
organism=Escherichia coli str. K-12 substr. MG1655
Gene - Raw genomic sequence with all regulatory regions
β 131 codons, 131 functional, 76 bonds
Pattern Distribution:
Pattern 3 (Structural (Simple)): 9 (6.9%)
Pattern 5 (Flow (Bonding)): 16 (12.2%)
Pattern 20 (Complex (Coordination)): 53 (40.5%)
Pattern 201 (Spiral Threaders (ΟΒΉ Harmonics)): 10 (7.6%)
Pattern 202 (Pentagon Ricochets (ΟΒ² Harmonics)): 12 (9.2%)
Pattern 203 (Fibonacci Pilers (ΟΒ³ Harmonics)): 6 (4.6%)
Pattern 204 (Golden Harmonic Resonators (Οβ΄ Harmonics)): 15 (11.5%)
Pattern 205 (Geometric Controllers (Οβ Harmonics)): 10 (7.6%)
Junk 66 (DNA's Highway - navigating, timing, scaling, control): 0 (0.0%)- 30S ribosomal subunit protein S8
https://www.ncbi.nlm.nih.gov/datasets/gene/947802/
rpsH - 30S ribosomal subunit protein S8 BETA Escherichia coli str. K-12 substr. MG1655 Gene name 30S ribosomal subunit protein S8 Symbol rpsH Gene ID 947802 Locus tag b3306 Organism Escherichia coli str. K-12 substr. MG1655 Gene type protein-coding Synonym ECK3293 Proteins 1 Refseq summary The S8 protein is a component of the 30S subunit of the ribosome and also functions in the post-transcriptional regulation of the ribosomal protein genes encoded in the spc operon. [More information is available at EcoCyc: EG10907].
Gaia's Grammar
Internal Bonds
Internal Guidance
Partner Bonds
Partner Guidance
π Geometry
Building Patterns
π Verbs
Action Flow
ποΈ Nouns
Structural Objects
π¨ Adjectives
Complex Descriptors
π€ Ready (+1)
Foundation Setting
β
Set (+2)
Coordination
π± Grow (+3)
Power Acceleration
π³ Grow On (+4)
Sustained Momentum
π² Grow Strong (+5)
Growth with authority
π£οΈ Gene Highway
Roadway for DNA
πβπ πβ‘ βπ πππ± βπ₯ ββ°οΈ βπͺ π΅π₯ βπ₯ βπ ββ πΈπ βπ¬ βπͺ βπ¬ π𧬠βποΈ ππΏ π΅π« π΅π₯ π𧬠ππ βπ§ π΅π₯ πΈπ πΈπ βπ βποΈ πΈπ πΈπ πππͺοΈ ββ ππ βπ π΅π― βπͺ π΅π« π𧬠βπ ββ πππͺοΈ β¬π β¬π βποΈ ππ΅ βπ° β¬π βπ₯ ππ΅ ππ πΈβ·οΈ β¬π β¬π« π΅πΌ, πΈπ πππͺοΈ βποΈ β¬π ββ β¬π βπ βπ― ββ πππͺοΈ βπ βπ΅ ππΏ β¬π« ππ βπ§ πΈβ·οΈ βπ» β¬π πβ‘ βπ° ππΏ βπ¬ πΈπ πβ‘ π΅π ππ βποΈ ββ π΅π βπͺ βπ ππ βπ¬ ππ βπ₯ β¬β ββ ββ°οΈ ππ πΈβ·οΈ βπ π΅π₯ βποΈ ββ βποΈ βπͺ π΅π― πΈβ·οΈ πΈβ·οΈ πΈπ₯ πΈπ πΈπ₯ ππ βποΈ πΈβ·οΈ βπ βπ― βπ₯ βπ¬ π΅π― π΅π₯ π΅π ππΏ βπ§ βποΈ βπ βποΈ β¬π« β¬π βπ° βπͺ βπ ββ΅ βπ» π΅π« βπ
Gene Report
π¬ RPSH_GENE
Function: π΅ HARMONIC TUNER (Frequency Coordination)
Total Codons: 131, Functional: 131
Pattern Distribution:
Pattern 3 (Structural (Simple)): 9 (6.9%)
Pattern 5 (Flow (Bonding)): 16 (12.2%)
Pattern 20 (Complex (Coordination)): 53 (40.5%)
Pattern 201 (Spiral Threaders (ΟΒΉ Harmonics)): 10 (7.6%)
Pattern 202 (Pentagon Ricochets (ΟΒ² Harmonics)): 12 (9.2%)
Pattern 203 (Fibonacci Pilers (ΟΒ³ Harmonics)): 6 (4.6%)
Pattern 204 (Golden Harmonic Resonators (Οβ΄ Harmonics)): 15 (11.5%)
Pattern 205 (Geometric Controllers (Οβ Harmonics)): 10 (7.6%)
Junk 66 (DNA's Highway - navigating, timing, scaling, control): 0 (0.0%)
Flow/Structure Ratio: 1.78 - βοΈ Moderate flow structure balance
Folding Strategy: π COMPLEX FOLDING (Multi-domain coordination)
Bonding Sites: 76
Early bonds: 40 (avg distance: 52.5)
Middle bonds: 29 (avg distance: 23.2)
Late bonds: 7 (avg distance: 16.1)
π Protein Folding - Bond/Coordination Candidates:
π’ @4 (203+1 :CAA) πͺ 51(2, 22.13 Γ
), 71(1, 27.74 Γ
), 95(-2, 26.03 Γ
), 103(0, 19.98 Γ
) β To @(5+4 GTT)
π’ @6 (20+14 :CCG) πͺ 53(2, 18.41 Γ
), 68(0, 28.71 Γ
) β To @(202+5 GGC) <> π΄ High Energy Collision 93 β To @(20+14 CCG)
π’ @8 (204+3 :GCG) πͺ 80(0, 8.14 Γ
), 84(-2, 13.25 Γ
) β To @(204+5 CGC) <> π΄ High Energy Collision 20, 24, 97 β To @(204+3 GCG)
π’ @11 (20+1 :CTG) πͺ 54(-2, 23.52 Γ
) β To @(204+1 GAC) <> π΄ High Energy Collision 32, 40, 59, 63, 83, 92, 99 β To @(20+1 CTG)
π· @12 (5+8 :ACC) β 29(0, 14.78 Γ
), 30(-1, 15.83 Γ
) β To @(5+7 TCC) <> π΄ High Energy Collision 26, 55, 106 β To @(5+8 ACC)
π· @13 (20+16 :CGT) πͺ 35(-2, 16.49 Γ
), 102(-2, 18.54 Γ
) β To @(204+2 GCA) <> π΄ High Energy Collision 15, 77, 88 β To @(20+16 CGT)
π· @15 (20+16 :CGT) πͺ 35(-2, 18.15 Γ
), 102(-2, 16.33 Γ
) β To @(204+2 GCA) <> π΄ High Energy Collision 13, 77, 88, 114 β To @(20+16 CGT)
π’ @17 (20+25 :GGT) πͺ 81(0, 23.74 Γ
) β To @(203+4 CCA) <> π΄ High Energy Collision 44, 82, 98, 100, 109 β To @(20+25 GGT)
π° @18 (203+2 :CAG) πͺ 25(-1, 8.99 Γ
), 78(0, 19.92 Γ
) β To @(5+6 GTC) <> π΄ High Energy Collision 67, 76 β To @(203+2 CAG)
π’ @20 (204+3 :GCG) πͺ 80(4, 25.48 Γ
), 84(0, 30.52 Γ
), 117(-2, 35.07 Γ
) β To @(204+5 CGC) <> π΄ High Energy Collision 8, 24, 97, 116 β To @(204+3 GCG)
π’ @24 (204+3 :GCG) πͺ 80(-1, 25.33 Γ
), 84(0, 29.63 Γ
), 117(1, 31.74 Γ
) β To @(204+5 CGC) <> π΄ High Energy Collision 8, 20, 97, 116 β To @(204+3 GCG)
π° @25 (5+6 :GTC) πͺ 18(-1, 8.99 Γ
), 67(0, 19.80 Γ
), 76(-2, 17.03 Γ
), 118(2, 32.05 Γ
) β To @(203+2 CAG) <> π΄ High Energy Collision 78 β To @(5+6 GTC)
π° @26 (5+8 :ACC) β 29(0, 8.85 Γ
), 30(0, 12.29 Γ
) β To @(5+7 TCC) <> π΄ High Energy Collision 12, 55, 106 β To @(5+8 ACC)
π’ @28 (3+8 :CCT) π 66(2, 26.93 Γ
) β To @(3+7 TTC) <> π΄ High Energy Collision 57 β To @(3+8 CCT)
π° @29 (5+7 :TCC) β 12(0, 14.78 Γ
), 26(0, 8.85 Γ
), 55(-2, 10.62 Γ
), 106(0, 20.58 Γ
) β To @(5+8 ACC) <> π΄ High Energy Collision 30 β To @(5+7 TCC)
π° @30 (5+7 :TCC) β 12(-1, 15.83 Γ
), 26(0, 12.29 Γ
), 55(1, 11.93 Γ
), 106(0, 17.44 Γ
) β To @(5+8 ACC) <> π΄ High Energy Collision 29 β To @(5+7 TCC)
π’ @31 (201+1 :AAG) πͺ 66(-2, 28.71 Γ
) β To @(3+7 TTC) <> π΄ High Energy Collision 41, 56, 64 β To @(201+1 AAG)
π· @32 (20+1 :CTG) πͺ 54(2, 17.20 Γ
) β To @(204+1 GAC) <> π΄ High Energy Collision 11, 40, 59, 63, 83, 92, 99 β To @(20+1 CTG)
π· @35 (204+2 :GCA) πͺ 13(-2, 16.49 Γ
), 15(-2, 18.15 Γ
), 77(0, 15.24 Γ
), 88(-2, 20.78 Γ
), 114(-2, 16.25 Γ
) β To @(20+16 CGT) <> π΄ High Energy Collision 102, 115 β To @(204+2 GCA)
π· @40 (20+1 :CTG) πͺ 54(-1, 23.92 Γ
) β To @(204+1 GAC) <> π΄ High Energy Collision 11, 32, 59, 63, 83, 92, 99 β To @(20+1 CTG)
π· @41 (201+1 :AAG) πͺ 66(-2, 15.06 Γ
) β To @(3+7 TTC) <> π΄ High Energy Collision 31, 56, 64 β To @(201+1 AAG)
π’ @44 (20+25 :GGT) πͺ 81(-2, 27.63 Γ
) β To @(203+4 CCA) <> π΄ High Energy Collision 17, 82, 98, 100, 109, 120, 122 β To @(20+25 GGT)
π’ @51 (5+4 :GTT) πͺ 4(2, 22.13 Γ
) β To @(203+1 CAA) <> π΄ High Energy Collision 71, 95, 103, 104, 110 β To @(5+4 GTT)
π’ @53 (202+5 :GGC) πͺ 6(2, 18.41 Γ
), 93(1, 36.64 Γ
) β To @(20+14 CCG) <> π΄ High Energy Collision 68, 123 β To @(202+5 GGC)
π° @54 (204+1 :GAC) πͺ 11(-2, 23.52 Γ
), 32(2, 17.20 Γ
), 40(-1, 23.92 Γ
), 59(-2, 11.79 Γ
), 63(-1, 23.72 Γ
), 83(-2, 33.20 Γ
), 92(1, 37.12 Γ
), 99(0, 37.77 Γ
) β To @(20+1 CTG) <> π‘βοΈ βοΈ Medium Energy Guidance + Unknown Coordination 204+1 205+1 + Unknown Coordination 205+1 204+1 22, 33, 50, 69, 80...,89, 94, 108, 117 β To @(204+5, 205+1 AAA, CGC)
π· @55 (5+8 :ACC) β 29(-2, 10.62 Γ
), 30(1, 11.93 Γ
) β To @(5+7 TCC) <> π΄ High Energy Collision 12, 26, 106 β To @(5+8 ACC)
π· @56 (201+1 :AAG) πͺ 66(-1, 32.47 Γ
) β To @(3+7 TTC) <> π΄ High Energy Collision 31, 41, 64 β To @(201+1 AAG)
π° @57 (3+8 :CCT) π 66(-1, 29.40 Γ
) β To @(3+7 TTC) <> π΄ High Energy Collision 28 β To @(3+8 CCT)
π° @59 (20+1 :CTG) πͺ 54(-2, 11.79 Γ
) β To @(204+1 GAC) <> π΄ High Energy Collision 11, 32, 40, 63, 83, 92, 99 β To @(20+1 CTG)
π° @63 (20+1 :CTG) πͺ 54(-1, 23.72 Γ
) β To @(204+1 GAC) <> π΄ High Energy Collision 11, 32, 40, 59, 83, 92, 99 β To @(20+1 CTG)
π° @64 (201+1 :AAG) πͺ 66(2, 6.92 Γ
) β To @(3+7 TTC) <> π΄ High Energy Collision 31, 41, 56 β To @(201+1 AAG)
π° @66 (3+7 :TTC) πͺπ Opposites + Structural Lock Key28(2, 26.93 Γ
), 31(-2, 28.71 Γ
), 41(-2, 15.06 Γ
), 56(-1, 32.47 Γ
), 57(-1, 29.40 Γ
), 64(2, 6.92 Γ
) β To @(201+1, 3+8 AAG, CCT)
π· @67 (203+2 :CAG) πͺ 25(0, 19.80 Γ
), 78(-2, 28.95 Γ
) β To @(5+6 GTC) <> π΄ High Energy Collision 18, 76, 118 β To @(203+2 CAG)
π· @68 (202+5 :GGC) πͺ 6(0, 28.71 Γ
), 93(-2, 29.85 Γ
) β To @(20+14 CCG) <> π΄ High Energy Collision 53, 123 β To @(202+5 GGC)
π’ @71 (5+4 :GTT) πͺ 4(1, 27.74 Γ
) β To @(203+1 CAA) <> π΄ High Energy Collision 51, 95, 103, 104, 110 β To @(5+4 GTT)
π° @76 (203+2 :CAG) πͺ 25(-2, 17.03 Γ
), 78(1, 6.20 Γ
) β To @(5+6 GTC) <> π΄ High Energy Collision 18, 67, 118 β To @(203+2 CAG)
π· @77 (20+16 :CGT) πͺ 35(0, 15.24 Γ
), 102(0, 10.14 Γ
), 115(-2, 19.38 Γ
) β To @(204+2 GCA) <> π΄ High Energy Collision 13, 15, 88, 114 β To @(20+16 CGT)
π° @78 (5+6 :GTC) πͺ 18(0, 19.92 Γ
), 67(-2, 28.95 Γ
), 76(1, 6.20 Γ
), 118(1, 21.50 Γ
) β To @(203+2 CAG) <> π΄ High Energy Collision 25 β To @(5+6 GTC)
π· @80 (204+5 :CGC) πͺ 8(0, 8.14 Γ
), 20(4, 25.48 Γ
), 24(-1, 25.33 Γ
), 97(3, 23.23 Γ
), 116(2, 20.28 Γ
) β To @(204+3 GCG) <> π΄π‘ High Energy Collision + Medium Energy Guidance 54, 84, 117 β To @(204+1, 204+5 CGC, GAC)
π° @81 (203+4 :CCA) πͺ 17(0, 23.74 Γ
), 44(-2, 27.63 Γ
), 82(3, 3.86 Γ
), 98(0, 26.35 Γ
), 100(-2, 23.41 Γ
), 109(-2, 19.22 Γ
), 120(-2, 25.83 Γ
), 122(-3, 19.00 Γ
) β To @(20+25 GGT)
π° @82 (20+25 :GGT) πͺ 81(3, 3.86 Γ
) β To @(203+4 CCA) <> π΄ High Energy Collision 17, 44, 98, 100, 109, 120, 122 β To @(20+25 GGT)
π· @83 (20+1 :CTG) πͺ 54(-2, 33.20 Γ
) β To @(204+1 GAC) <> π΄ High Energy Collision 11, 32, 40, 59, 63, 92, 99 β To @(20+1 CTG)
π· @84 (204+5 :CGC) πͺ 8(-2, 13.25 Γ
), 20(0, 30.52 Γ
), 24(0, 29.63 Γ
), 97(0, 23.15 Γ
), 116(-2, 18.03 Γ
) β To @(204+3 GCG) <> π΄π‘ High Energy Collision + Medium Energy Guidance 54, 80, 117 β To @(204+1, 204+5 CGC, GAC)
π· @88 (20+16 :CGT) πͺ 35(-2, 20.78 Γ
), 102(0, 13.29 Γ
), 115(-2, 13.38 Γ
) β To @(204+2 GCA) <> π΄ High Energy Collision 13, 15, 77, 114 β To @(20+16 CGT)
π’ @92 (20+1 :CTG) πͺ 54(1, 37.12 Γ
) β To @(204+1 GAC) <> π΄ High Energy Collision 11, 32, 40, 59, 63, 83, 99 β To @(20+1 CTG)
π· @93 (20+14 :CCG) πͺ 53(1, 36.64 Γ
), 68(-2, 29.85 Γ
), 123(-1, 11.31 Γ
) β To @(202+5 GGC) <> π΄ High Energy Collision 6 β To @(20+14 CCG)
π’ @95 (5+4 :GTT) πͺ 4(-2, 26.03 Γ
) β To @(203+1 CAA) <> π΄ High Energy Collision 51, 71, 103, 104, 110 β To @(5+4 GTT)
π’ @96 (20+5 :ATG) πͺ 128(0, 9.61 Γ
) β To @(20+8 TAC) <> π΄ High Energy Collision 1, 3, 10, 27, 111 β To @(20+5 ATG)
π· @97 (204+3 :GCG) πͺ 80(3, 23.23 Γ
), 84(0, 23.15 Γ
), 117(-2, 14.83 Γ
) β To @(204+5 CGC) <> π΄ High Energy Collision 8, 20, 24, 116 β To @(204+3 GCG)
π· @98 (20+25 :GGT) πͺ 81(0, 26.35 Γ
) β To @(203+4 CCA) <> π΄ High Energy Collision 17, 44, 82, 100, 109, 120, 122 β To @(20+25 GGT)
π’ @99 (20+1 :CTG) πͺ 54(0, 37.77 Γ
) β To @(204+1 GAC) <> π΄ High Energy Collision 11, 32, 40, 59, 63, 83, 92 β To @(20+1 CTG)
π· @100 (20+25 :GGT) πͺ 81(-2, 23.41 Γ
) β To @(203+4 CCA) <> π΄ High Energy Collision 17, 44, 82, 98, 109, 120, 122 β To @(20+25 GGT)
π· @102 (204+2 :GCA) πͺ 13(-2, 18.54 Γ
), 15(-2, 16.33 Γ
), 77(0, 10.14 Γ
), 88(0, 13.29 Γ
), 114(-2, 8.20 Γ
) β To @(20+16 CGT) <> π΄ High Energy Collision 35, 115 β To @(204+2 GCA)
π’ @103 (5+4 :GTT) πͺ 4(0, 19.98 Γ
) β To @(203+1 CAA) <> π΄ High Energy Collision 51, 71, 95, 104, 110 β To @(5+4 GTT)
π’ @106 (5+8 :ACC) β 29(0, 20.58 Γ
), 30(0, 17.44 Γ
) β To @(5+7 TCC) <> π΄ High Energy Collision 12, 26, 55 β To @(5+8 ACC)
π· @109 (20+25 :GGT) πͺ 81(-2, 19.22 Γ
) β To @(203+4 CCA) <> π΄ High Energy Collision 17, 44, 82, 98, 100, 120, 122 β To @(20+25 GGT)
π· @111 (20+5 :ATG) πͺ 128(0, 12.06 Γ
) β To @(20+8 TAC) <> π΄ High Energy Collision 27, 96 β To @(20+5 ATG)
π° @114 (20+16 :CGT) πͺ 35(-2, 16.25 Γ
), 102(-2, 8.20 Γ
), 115(6, 3.84 Γ
) β To @(204+2 GCA) <> π΄ High Energy Collision 15, 77, 88 β To @(20+16 CGT)
π° @115 (204+2 :GCA) πͺ 77(-2, 19.38 Γ
), 88(-2, 13.38 Γ
), 114(6, 3.84 Γ
) β To @(20+16 CGT) <> π΄ High Energy Collision 35, 102 β To @(204+2 GCA)
π° @116 (204+3 :GCG) πͺ 80(2, 20.28 Γ
), 84(-2, 18.03 Γ
), 117(8, 3.88 Γ
) β To @(204+5 CGC) <> π΄ High Energy Collision 20, 24, 97 β To @(204+3 GCG)
π° @117 (204+5 :CGC) πͺ 20(-2, 35.07 Γ
), 24(1, 31.74 Γ
), 97(-2, 14.83 Γ
), 116(8, 3.88 Γ
) β To @(204+3 GCG) <> π΄π‘ High Energy Collision + Medium Energy Guidance 54, 80, 84 β To @(204+1, 204+5 CGC, GAC)
π’ @118 (203+2 :CAG) πͺ 25(2, 32.05 Γ
), 78(1, 21.50 Γ
) β To @(5+6 GTC) <> π΄ High Energy Collision 67, 76 β To @(203+2 CAG)
π’ @120 (20+25 :GGT) πͺ 81(-2, 25.83 Γ
) β To @(203+4 CCA) <> π΄ High Energy Collision 44, 82, 98, 100, 109, 122 β To @(20+25 GGT)
π’ @122 (20+25 :GGT) πͺ 81(-3, 19.00 Γ
) β To @(203+4 CCA) <> π΄ High Energy Collision 44, 82, 98, 100, 109, 120 β To @(20+25 GGT)
π’ @123 (202+5 :GGC) πͺ 93(-1, 11.31 Γ
) β To @(20+14 CCG) <> π΄ High Energy Collision 53, 68 β To @(202+5 GGC)
π· @128 (20+8 :TAC) πͺ 96(0, 9.61 Γ
), 111(0, 12.06 Γ
) β To @(20+5 ATG)
𧬠=== PDB STRUCTURAL ANALYSIS: RPSH_GENE ===
π STRUCTURAL STATISTICS:
Total Residues: 130
Total Neighbor Pairs: 249
Avg Neighbors/Residue: 2.9
Distance Range: 2.8 - 6.5 Γ
π BOND TYPE DISTRIBUTION:
π‘ Medium Range Center Head Mixed Interaction: 39 (15.66%)
Distance: 4.87Γ
avg (4.04-6.37Γ
)
π΄ Close Contact Head Head Mixed Interaction: 27 (10.84%)
Distance: 3.24Γ
avg (2.81-3.83Γ
)
π΄ Close Contact Center Head Mixed Interaction: 21 (8.43%)
Distance: 3.56Γ
avg (3.23-3.99Γ
)
π‘ Medium Range Center Center Mixed Interaction: 19 (7.63%)
Distance: 4.85Γ
avg (4.18-5.98Γ
)
π΄ Close Contact Head Tail Mixed Interaction: 15 (6.02%)
Distance: 3.35Γ
avg (2.77-3.98Γ
)
π‘ Medium Range Head Head Mixed Interaction: 13 (5.22%)
Distance: 4.91Γ
avg (4.19-5.58Γ
)
π‘ Medium Range Center Tail Mixed Interaction: 12 (4.82%)
Distance: 5.04Γ
avg (4.09-6.15Γ
)
π΄ Close Contact Center Tail Mixed Interaction: 10 (4.02%)
Distance: 3.66Γ
avg (3.38-3.99Γ
)
π’οΈ Medium Range Center Tail Hydrophobic Interaction: 9 (3.61%)
Distance: 4.84Γ
avg (4.35-5.83Γ
)
π’οΈ Close Contact Head Head Hydrophobic Interaction: 8 (3.21%)
Distance: 3.20Γ
avg (2.75-3.78Γ
)
π‘ Medium Range Head Tail Mixed Interaction: 8 (3.21%)
Distance: 5.09Γ
avg (4.02-5.89Γ
)
π’οΈ Close Contact Center Head Hydrophobic Interaction: 8 (3.21%)
Distance: 3.66Γ
avg (3.20-3.97Γ
)
π΄ Close Contact Tail Tail Mixed Interaction: 6 (2.41%)
Distance: 3.52Γ
avg (2.76-3.90Γ
)
π’οΈ Medium Range Center Head Hydrophobic Interaction: 6 (2.41%)
Distance: 5.02Γ
avg (4.43-5.97Γ
)
π’οΈ Close Contact Center Tail Hydrophobic Interaction: 5 (2.01%)
Distance: 3.78Γ
avg (3.65-3.93Γ
)
π’οΈ Close Contact Head Tail Hydrophobic Interaction: 5 (2.01%)
Distance: 3.40Γ
avg (2.92-3.83Γ
)
β‘ Close Contact Tail Tail Salt Bridge: 4 (1.61%)
Distance: 3.46Γ
avg (2.87-3.95Γ
)
π‘ Medium Range Tail Tail Mixed Interaction: 4 (1.61%)
Distance: 4.93Γ
avg (4.18-6.41Γ
)
π’οΈ Medium Range Head Head Hydrophobic Interaction: 4 (1.61%)
Distance: 4.78Γ
avg (4.34-5.60Γ
)
π’οΈ Medium Range Tail Tail Hydrophobic Interaction: 4 (1.61%)
Distance: 5.13Γ
avg (4.43-6.46Γ
)
β‘ Medium Range Center Head Salt Bridge: 4 (1.61%)
Distance: 4.99Γ
avg (4.11-5.82Γ
)
π’οΈ Medium Range Head Tail Hydrophobic Interaction: 4 (1.61%)
Distance: 4.35Γ
avg (4.03-4.88Γ
)
π’οΈ Medium Range Center Center Hydrophobic Interaction: 4 (1.61%)
Distance: 4.73Γ
avg (4.43-5.16Γ
)
π§ Close Contact Center Head Hydrogen Bond: 2 (0.80%)
Distance: 3.25Γ
avg (2.85-3.64Γ
)
π§ Close Contact Tail Tail Hydrogen Bond: 1 (0.40%)
Distance: 3.63Γ
avg (3.63-3.63Γ
)
π§ Medium Range Center Head Hydrogen Bond: 1 (0.40%)
Distance: 4.47Γ
avg (4.47-4.47Γ
)
β‘ Medium Range Tail Tail Salt Bridge: 1 (0.40%)
Distance: 4.00Γ
avg (4.00-4.00Γ
)
π§ Medium Range Center Center Hydrogen Bond: 1 (0.40%)
Distance: 5.40Γ
avg (5.40-5.40Γ
)
π§ Close Contact Head Head Hydrogen Bond: 1 (0.40%)
Distance: 2.96Γ
avg (2.96-2.96Γ
)
β‘ Medium Range Head Head Salt Bridge: 1 (0.40%)
Distance: 5.43Γ
avg (5.43-5.43Γ
)
β‘ Close Contact Head Head Salt Bridge: 1 (0.40%)
Distance: 3.53Γ
avg (3.53-3.53Γ
)
π’οΈ Close Contact Center Center Hydrophobic Interaction: 1 (0.40%)
Distance: 3.78Γ
avg (3.78-3.78Γ
)
π CONNECTIVITY HUBS (Top 5 Most Connected Residues):
1. Residue 5 (20+24): 0 connections
Avg Distance: 0.00Γ
, Dominant Bond: unknown
2. Residue 6 (20+14): 0 connections
Avg Distance: 0.00Γ
, Dominant Bond: unknown
3. Residue 7 (20+6): 0 connections
Avg Distance: 0.00Γ
, Dominant Bond: unknown
4. Residue 8 (204+3): 0 connections
Avg Distance: 0.00Γ
, Dominant Bond: unknown
5. Residue 9 (20+24): 0 connections
Avg Distance: 0.00Γ
, Dominant Bond: unknown
π DISTANCE DISTRIBUTION:
π΄ Close Contacts (<4Γ
): 115 (46.18%)
π‘ Medium Range (4-8Γ
): 134 (53.82%)
π’ Long Range (8-15Γ
): 0 (0.00%)
π΅ Very Long (>15Γ
): 0 (0.00%)
π Neighbor Analysis:
1. Res 27 β 59 (head-head) 2.75Γ
(Ξ 32) - close_contact_head_head_hydrophobic_interaction
2. Res 38 β 42 (tail-tail) 2.76Γ
(Ξ 4) - close_contact_tail_tail_mixed_interaction
3. Res 74 β 130 (head-tail) 2.77Γ
(Ξ 56) - close_contact_head_tail_mixed_interaction
4. Res 15 β 75 (tail-head) 2.79Γ
(Ξ 60) - close_contact_head_tail_mixed_interaction
5. Res 13 β 17 (head-head) 2.81Γ
(Ξ 4) - close_contact_head_head_mixed_interaction
6. Res 66 β 69 (head-head) 2.81Γ
(Ξ 3) - close_contact_head_head_mixed_interaction
7. Res 101 β 129 (head-head) 2.83Γ
(Ξ 28) - close_contact_head_head_hydrophobic_interaction
8. Res 102 β 113 (tail-head) 2.83Γ
(Ξ 11) - close_contact_head_tail_mixed_interaction
9. Res 48 β 62 (head-head) 2.85Γ
(Ξ 14) - close_contact_head_head_mixed_interaction
10. Res 127 β 128 (head-center) 2.85Γ
(Ξ 1) - close_contact_center_head_hydrogen_bond
Sequence Separation Distribution:
π Adjacent (1-3): 73 (29.32%) - Avg: 3.98Γ
π Local (4-10): 66 (26.51%) - Avg: 4.15Γ
π Medium (11-25): 35 (14.06%) - Avg: 4.59Γ
π Long-range (26-50): 55 (22.09%) - Avg: 4.30Γ
π Cross-domain (>50): 20 (8.03%) - Avg: 4.44Γ
π― 3.8-3.9Γ
Cluster Analysis:
Total in cluster: 10 neighbors
Separation 3: 5 contacts
π― CODON PATTERN CORRELATIONS (Preview):
π‘ STRUCTURAL INSIGHTS:
𧡠Loosely connected structure (1.9 contacts/residue)
π High bond type diversity (32 different types)
==================================================
π Inter-Protein Assembly Analysis:
Partners analyzed: 5
Assembly prediction: Tight Assembly
π Inter-Protein Candidates:
π’ @1 (20+5:ATG) πͺ Opposites β rpsE_gene@50 20+8:TAC <> π΄ High Energy Collision 1, 64, 71, 96, 111, 147, 152 20+5:ATG
π’ @3 (20+5:ATG) πͺ Opposites β rpsE_gene@50 20+8:TAC <> π΄ High Energy Collision 1, 64, 71, 96, 111, 147, 152 20+5:ATG
π· @4 (203+1:CAA) πͺ Opposites β rpsE_gene@25, 39, 46, 56, 85...,120, 123, 137, 161 5+4:GTT <> π΄ High Energy Collision 7, 82 203+1:CAA
π° @6 (20+14:CCG) πͺ Opposites β rpsE_gene@9, 40, 79, 143 202+5:GGC <> π΄ High Energy Collision 98, 133 20+14:CCG
π· @8 (204+3:GCG) πͺ Opposites β rpsE_gene@20, 45, 69, 93, 112 204+5:CGC <> π΄ High Energy Collision 17, 53, 59, 63, 75 204+3:GCG
π’ @10 (20+5:ATG) πͺ Opposites β rpsE_gene@50 20+8:TAC <> π΄ High Energy Collision 1, 64, 71, 96, 111, 147, 152 20+5:ATG
π· @12 (5+8:ACC) β Flow Figure8 β rpsE_gene@32, 100, 130, 160 5+7:TCC <> π΄ High Energy Collision 24, 103, 131 5+8:ACC
π’ @13 (20+16:CGT) πͺ Opposites β rpsE_gene@58, 110, 139 204+2:GCA <> π΄ High Energy Collision 29, 54, 68, 138, 157 20+16:CGT
π’ @15 (20+16:CGT) πͺ Opposites β rpsE_gene@58, 110, 139 204+2:GCA <> π΄ High Energy Collision 29, 54, 68, 138, 157 20+16:CGT
π’ @17 (20+25:GGT) πͺ Opposites β rpsE_gene@57, 150 203+4:CCA <> π΄ High Energy Collision 27, 28, 42, 44, 47...,108, 109, 129, 158 20+25:GGT
π’ @18 (203+2:CAG) πͺ Opposites β rpsE_gene@74, 117, 153 5+6:GTC <> π΄ High Energy Collision 12, 61, 97 203+2:CAG
π° @20 (204+3:GCG) πͺ Opposites β rpsE_gene@20, 45, 69, 93, 112 204+5:CGC <> π΄ High Energy Collision 17, 53, 59, 63, 75 204+3:GCG
π° @24 (204+3:GCG) πͺ Opposites β rpsE_gene@20, 45, 69, 93, 112 204+5:CGC <> π΄ High Energy Collision 17, 53, 59, 63, 75 204+3:GCG
π· @25 (5+6:GTC) πͺ Opposites β rpsE_gene@12, 61, 97 203+2:CAG <> π΄ High Energy Collision 74, 117, 153 5+6:GTC
π° @26 (5+8:ACC) β Flow Figure8 β rpsE_gene@32, 100, 130, 160 5+7:TCC <> π΄ High Energy Collision 24, 103, 131 5+8:ACC
π· @27 (20+5:ATG) πͺ Opposites β rpsE_gene@50 20+8:TAC <> π΄ High Energy Collision 1, 64, 71, 96, 111, 147, 152 20+5:ATG
π° @28 (3+8:CCT) π Structural Lock Key β rpsE_gene@31, 33, 95 3+7:TTC <> π΄ High Energy Collision 84 3+8:CCT
π° @29 (5+7:TCC) β Flow Figure8 β rpsE_gene@24, 103, 131 5+8:ACC <> π΄ High Energy Collision 32, 100, 130, 160 5+7:TCC
π° @30 (5+7:TCC) β Flow Figure8 β rpsE_gene@24, 103, 131 5+8:ACC <> π΄ High Energy Collision 32, 100, 130, 160 5+7:TCC
π° @31 (201+1:AAG) πͺ Opposites β rpsE_gene@31, 33, 95 3+7:TTC <> π΄ High Energy Collision 14, 119, 156, 166 201+1,201+5:AAG,GGG
π’ @34 (20+23:GTG) πͺ Opposites β rpsE_gene@3, 83, 89 20+13:CAC <> π΄ High Energy Collision 136 20+23:GTG
π° @35 (204+2:GCA) πͺ Opposites β rpsE_gene@29, 54, 68, 138, 157 20+16:CGT <> π΄ High Energy Collision 58, 110, 139 204+2:GCA
π’ @39 (20+23:GTG) πͺ Opposites β rpsE_gene@3, 83, 89 20+13:CAC <> π΄ High Energy Collision 136 20+23:GTG
π° @41 (201+1:AAG) πͺ Opposites β rpsE_gene@31, 33, 95 3+7:TTC <> π΄ High Energy Collision 14, 119, 156, 166 201+1,201+5:AAG,GGG
π· @44 (20+25:GGT) πͺ Opposites β rpsE_gene@57, 150 203+4:CCA <> π΄ High Energy Collision 27, 28, 42, 44, 47...,108, 109, 129, 158 20+25:GGT
π’ @51 (5+4:GTT) πͺ Opposites β rpsE_gene@7, 82 203+1:CAA <> π΄ High Energy Collision 25, 39, 46, 56, 85...,120, 123, 137, 161 5+4:GTT
π’ @53 (202+5:GGC) πͺ Opposites β rpsE_gene@98, 133 20+14:CCG <> π΄ High Energy Collision 9, 40, 79, 143 202+5:GGC
π· @54 (204+1:GAC) πͺ Opposites β rpsE_gene@11, 15, 36, 76, 81, 115, 124, 144, 165 20+1:CTG <> π‘βοΈ Opposites 6, 20, 23, 26, 45...,112, 126, 159, 167 204+5,205+1:AAA,CGC
π· @55 (5+8:ACC) β Flow Figure8 β rpsE_gene@32, 100, 130, 160 5+7:TCC <> π΄ High Energy Collision 24, 103, 131 5+8:ACC
π· @56 (201+1:AAG) πͺ Opposites β rpsE_gene@31, 33, 95 3+7:TTC <> π΄ High Energy Collision 14, 119, 156, 166 201+1,201+5:AAG,GGG
π· @57 (3+8:CCT) π Structural Lock Key β rpsE_gene@31, 33, 95 3+7:TTC <> π΄ High Energy Collision 84 3+8:CCT
π’ @64 (201+1:AAG) πͺ Opposites β rpsE_gene@31, 33, 95 3+7:TTC <> π΄ High Energy Collision 14, 119, 156, 166 201+1,201+5:AAG,GGG
π· @66 (3+7:TTC) πͺπ Opposites + Structural Lock Key β rpsE_gene@14, 84, 156 201+1,3+8:AAG,CCT <> π΄ High Energy Collision 31, 33, 95 3+7:TTC
π° @67 (203+2:CAG) πͺ Opposites β rpsE_gene@74, 117, 153 5+6:GTC <> π΄ High Energy Collision 12, 61, 97 203+2:CAG
π’ @68 (202+5:GGC) πͺ Opposites β rpsE_gene@98, 133 20+14:CCG <> π΄ High Energy Collision 9, 40, 79, 143 202+5:GGC
π· @71 (5+4:GTT) πͺ Opposites β rpsE_gene@7, 82 203+1:CAA <> π΄ High Energy Collision 25, 39, 46, 56, 85...,120, 123, 137, 161 5+4:GTT
π’ @72 (20+22:GTA) πͺ Opposites β rpsE_gene@121 20+2:CAT <> π΄ High Energy Collision 18, 21, 38, 94 20+22:GTA
π° @76 (203+2:CAG) πͺ Opposites β rpsE_gene@74, 117, 153 5+6:GTC <> π΄ High Energy Collision 12, 61, 97 203+2:CAG
π· @77 (20+16:CGT) πͺ Opposites β rpsE_gene@58, 110, 139 204+2:GCA <> π΄ High Energy Collision 29, 54, 68, 138, 157 20+16:CGT
π· @78 (5+6:GTC) πͺ Opposites β rpsE_gene@12, 61, 97 203+2:CAG <> π΄ High Energy Collision 74, 117, 153 5+6:GTC
π° @80 (204+5:CGC) πͺ Opposites β rpsE_gene@17, 53, 59, 63, 75 204+3:GCG <> π΄ High Energy Collision 20, 45, 69, 93, 112 204+5:CGC
π° @81 (203+4:CCA) πͺ Opposites β rpsE_gene@27, 28, 42, 44, 47...,108, 109, 129, 158 20+25:GGT <> π΄ High Energy Collision 57, 150 203+4:CCA
π· @82 (20+25:GGT) πͺ Opposites β rpsE_gene@57, 150 203+4:CCA <> π΄ High Energy Collision 27, 28, 42, 44, 47...,108, 109, 129, 158 20+25:GGT
π° @84 (204+5:CGC) πͺ Opposites β rpsE_gene@17, 53, 59, 63, 75 204+3:GCG <> π΄ High Energy Collision 20, 45, 69, 93, 112 204+5:CGC
π· @88 (20+16:CGT) πͺ Opposites β rpsE_gene@58, 110, 139 204+2:GCA <> π΄ High Energy Collision 29, 54, 68, 138, 157 20+16:CGT
π· @93 (20+14:CCG) πͺ Opposites β rpsE_gene@9, 40, 79, 143 202+5:GGC <> π΄ High Energy Collision 98, 133 20+14:CCG
π· @95 (5+4:GTT) πͺ Opposites β rpsE_gene@7, 82 203+1:CAA <> π΄ High Energy Collision 25, 39, 46, 56, 85...,120, 123, 137, 161 5+4:GTT
π’ @96 (20+5:ATG) πͺ Opposites β rpsE_gene@50 20+8:TAC <> π΄ High Energy Collision 1, 64, 71, 96, 111, 147, 152 20+5:ATG
π° @97 (204+3:GCG) πͺ Opposites β rpsE_gene@20, 45, 69, 93, 112 204+5:CGC <> π΄ High Energy Collision 17, 53, 59, 63, 75 204+3:GCG
π’ @98 (20+25:GGT) πͺ Opposites β rpsE_gene@57, 150 203+4:CCA <> π΄ High Energy Collision 27, 28, 42, 44, 47...,108, 109, 129, 158 20+25:GGT
π’ @100 (20+25:GGT) πͺ Opposites β rpsE_gene@57, 150 203+4:CCA <> π΄ High Energy Collision 27, 28, 42, 44, 47...,108, 109, 129, 158 20+25:GGT
π’ @102 (204+2:GCA) πͺ Opposites β rpsE_gene@29, 54, 68, 138, 157 20+16:CGT <> π΄ High Energy Collision 58, 110, 139 204+2:GCA
π· @103 (5+4:GTT) πͺ Opposites β rpsE_gene@7, 82 203+1:CAA <> π΄ High Energy Collision 25, 39, 46, 56, 85...,120, 123, 137, 161 5+4:GTT
π· @104 (5+4:GTT) πͺ Opposites β rpsE_gene@7, 82 203+1:CAA <> π΄ High Energy Collision 25, 39, 46, 56, 85...,120, 123, 137, 161 5+4:GTT
π° @106 (5+8:ACC) β Flow Figure8 β rpsE_gene@32, 100, 130, 160 5+7:TCC <> π΄ High Energy Collision 24, 103, 131 5+8:ACC
π’ @109 (20+25:GGT) πͺ Opposites β rpsE_gene@57, 150 203+4:CCA <> π΄ High Energy Collision 27, 28, 42, 44, 47...,108, 109, 129, 158 20+25:GGT
π· @110 (5+4:GTT) πͺ Opposites β rpsE_gene@7, 82 203+1:CAA <> π΄ High Energy Collision 25, 39, 46, 56, 85...,120, 123, 137, 161 5+4:GTT
π’ @111 (20+5:ATG) πͺ Opposites β rpsE_gene@50 20+8:TAC <> π΄ High Energy Collision 1, 64, 71, 96, 111, 147, 152 20+5:ATG
π° @114 (20+16:CGT) πͺ Opposites β rpsE_gene@58, 110, 139 204+2:GCA <> π΄ High Energy Collision 29, 54, 68, 138, 157 20+16:CGT
π· @115 (204+2:GCA) πͺ Opposites β rpsE_gene@29, 54, 68, 138, 157 20+16:CGT <> π΄ High Energy Collision 58, 110, 139 204+2:GCA
π° @116 (204+3:GCG) πͺ Opposites β rpsE_gene@20, 45, 69, 93, 112 204+5:CGC <> π΄ High Energy Collision 17, 53, 59, 63, 75 204+3:GCG
π’ @117 (204+5:CGC) πͺ Opposites β rpsE_gene@17, 53, 59, 63, 75 204+3:GCG <> π΄ High Energy Collision 20, 45, 69, 93, 112 204+5:CGC
π° @118 (203+2:CAG) πͺ Opposites β rpsE_gene@74, 117, 153 5+6:GTC <> π΄ High Energy Collision 12, 61, 97 203+2:CAG
π’ @120 (20+25:GGT) πͺ Opposites β rpsE_gene@57, 150 203+4:CCA <> π΄ High Energy Collision 27, 28, 42, 44, 47...,108, 109, 129, 158 20+25:GGT
π· @122 (20+25:GGT) πͺ Opposites β rpsE_gene@57, 150 203+4:CCA <> π΄ High Energy Collision 27, 28, 42, 44, 47...,108, 109, 129, 158 20+25:GGT
π· @123 (202+5:GGC) πͺ Opposites β rpsE_gene@98, 133 20+14:CCG <> π΄ High Energy Collision 9, 40, 79, 143 202+5:GGC
π’ @127 (20+12:TGC) πͺ Opposites β rpsE_gene@90 20+20:ACG <> Opposites :
π· @128 (20+8:TAC) πͺ Opposites β rpsE_gene@1, 64, 71, 96, 111, 147, 152 20+5:ATG <> π΄ High Energy Collision 50 20+8:TAC
π° @129 (20+22:GTA) πͺ Opposites β rpsE_gene@121 20+2:CAT <> π΄ High Energy Collision 18, 21, 38, 94 20+22:GTA
π’ @1 (20+5:ATG) πͺ Opposites β rplD_gene@101 20+8:TAC <> π΄ High Energy Collision 1, 100, 141, 188, 199 20+5:ATG
π’ @3 (20+5:ATG) πͺ Opposites β rplD_gene@101 20+8:TAC <> π΄ High Energy Collision 1, 100, 141, 188, 199 20+5:ATG
π· @4 (203+1:CAA) πͺ Opposites β rplD_gene@14, 28, 31, 32, 33...,167, 178, 193, 196 5+4:GTT <> π΄ High Energy Collision 94, 195 203+1:CAA
π’ @6 (20+14:CCG) πͺ Opposites β rplD_gene@64, 66, 82, 103 202+5:GGC <> π΄ High Energy Collision 59, 76, 89, 129, 177 20+14:CCG
π’ @8 (204+3:GCG) πͺ Opposites β rplD_gene@61, 102, 162, 170 204+5:CGC <> π΄ High Energy Collision 8, 11, 26, 68, 104, 128, 161 204+3:GCG
π’ @10 (20+5:ATG) πͺ Opposites β rplD_gene@101 20+8:TAC <> π΄ High Energy Collision 1, 100, 141, 188, 199 20+5:ATG
π° @11 (20+1:CTG) πͺ Opposites β rplD_gene@7, 91, 140, 154, 168, 176, 184 204+1:GAC <> π΄ High Energy Collision 12, 27, 105, 109, 112...,159, 164, 180, 200 20+1:CTG
π° @12 (5+8:ACC) β Flow Figure8 β rplD_gene@15, 55, 110 5+7:TCC <> π΄ High Energy Collision 18, 65, 84, 150 5+8:ACC
π· @13 (20+16:CGT) πͺ Opposites β rplD_gene@36, 135, 172, 201 204+2:GCA <> π΄ High Energy Collision 21, 40, 44, 49, 67, 69, 79, 88, 114, 117 20+16:CGT
π· @15 (20+16:CGT) πͺ Opposites β rplD_gene@36, 135, 172, 201 204+2:GCA <> π΄ High Energy Collision 21, 40, 44, 49, 67, 69, 79, 88, 114, 117 20+16:CGT
π· @16 (201+2:AAC) πͺ Opposites β rplD_gene@5 5+3:TTG <> π΄ High Energy Collision 24, 97, 156, 163 201+2:AAC
π’ @18 (203+2:CAG) πͺ Opposites β rplD_gene@121, 186 5+6:GTC <> π΄ High Energy Collision 9, 30, 41, 46, 62, 90, 115, 136 203+2:CAG
π’ @20 (204+3:GCG) πͺ Opposites β rplD_gene@61, 102, 162, 170 204+5:CGC <> π΄ High Energy Collision 8, 11, 26, 68, 104, 128, 161 204+3:GCG
π· @21 (201+2:AAC) πͺ Opposites β rplD_gene@5 5+3:TTG <> π΄ High Energy Collision 24, 97, 156, 163 201+2:AAC
π’ @24 (204+3:GCG) πͺ Opposites β rplD_gene@61, 102, 162, 170 204+5:CGC <> π΄ High Energy Collision 8, 11, 26, 68, 104, 128, 161 204+3:GCG
π° @25 (5+6:GTC) βπͺ Flow Figure8 + Opposites β rplD_gene@9, 30, 41, 46, 60, 62, 78, 90, 115, 136 203+2,5+5:CAG,TGG <> π΄ High Energy Collision 121, 186 5+6:GTC
π· @26 (5+8:ACC) β Flow Figure8 β rplD_gene@15, 55, 110 5+7:TCC <> π΄ High Energy Collision 18, 65, 84, 150 5+8:ACC
π’ @27 (20+5:ATG) πͺ Opposites β rplD_gene@101 20+8:TAC <> π΄ High Energy Collision 1, 100, 141, 188, 199 20+5:ATG
π° @28 (3+8:CCT) π Structural Lock Key β rplD_gene@19, 23, 124, 158, 183 3+7:TTC <> Structural Lock Key :
π· @29 (5+7:TCC) β Flow Figure8 β rplD_gene@18, 65, 84, 150 5+8:ACC <> π΄ High Energy Collision 15, 55, 110 5+7:TCC
π· @30 (5+7:TCC) β Flow Figure8 β rplD_gene@18, 65, 84, 150 5+8:ACC <> π΄ High Energy Collision 15, 55, 110 5+7:TCC
π° @31 (201+1:AAG) πͺ Opposites β rplD_gene@19, 23, 124, 158, 183 3+7:TTC <> π΄ High Energy Collision 47, 74, 98, 99, 123, 132, 166, 194 201+1:AAG
π· @32 (20+1:CTG) πͺ Opposites β rplD_gene@7, 91, 140, 154, 168, 176, 184 204+1:GAC <> π΄ High Energy Collision 12, 27, 105, 109, 112...,159, 164, 180, 200 20+1:CTG
π° @34 (20+23:GTG) πͺ Opposites β rplD_gene@29, 92, 165 20+13:CAC <> π΄ High Energy Collision 83, 146 20+23:GTG
π° @35 (204+2:GCA) πͺ Opposites β rplD_gene@21, 40, 44, 49, 67, 69, 79, 88, 114, 117 20+16:CGT <> π΄ High Energy Collision 36, 135, 172, 201 204+2:GCA
π’ @38 (201+2:AAC) πͺ Opposites β rplD_gene@5 5+3:TTG <> π΄ High Energy Collision 24, 97, 156, 163 201+2:AAC
π· @39 (20+23:GTG) πͺ Opposites β rplD_gene@29, 92, 165 20+13:CAC <> π΄ High Energy Collision 83, 146 20+23:GTG
π’ @40 (20+1:CTG) πͺ Opposites β rplD_gene@7, 91, 140, 154, 168, 176, 184 204+1:GAC <> π΄ High Energy Collision 12, 27, 105, 109, 112...,159, 164, 180, 200 20+1:CTG
π· @41 (201+1:AAG) πͺ Opposites β rplD_gene@19, 23, 124, 158, 183 3+7:TTC <> π΄ High Energy Collision 47, 74, 98, 99, 123, 132, 166, 194 201+1:AAG
π’ @51 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rplD_gene@5, 94, 195 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 14, 28, 31, 32, 33...,167, 178, 193, 196 5+4:GTT
π° @53 (202+5:GGC) πͺ Opposites β rplD_gene@59, 76, 89, 129, 177 20+14:CCG <> π΄ High Energy Collision 64, 66, 82, 103 202+5:GGC
π· @54 (204+1:GAC) πͺ Opposites β rplD_gene@12, 27, 105, 109, 112...,159, 164, 180, 200 20+1:CTG <> π΄π‘βοΈ Opposites 6, 7, 57, 58, 61...,170, 176, 184, 185 204+1,204+5,205+1:AAA,CGC,GAC
π° @55 (5+8:ACC) β Flow Figure8 β rplD_gene@15, 55, 110 5+7:TCC <> π΄ High Energy Collision 18, 65, 84, 150 5+8:ACC
π’ @56 (201+1:AAG) πͺ Opposites β rplD_gene@19, 23, 124, 158, 183 3+7:TTC <> π΄ High Energy Collision 47, 74, 98, 99, 123, 132, 166, 194 201+1:AAG
π’ @57 (3+8:CCT) π Structural Lock Key β rplD_gene@19, 23, 124, 158, 183 3+7:TTC <> Structural Lock Key :
π’ @59 (20+1:CTG) πͺ Opposites β rplD_gene@7, 91, 140, 154, 168, 176, 184 204+1:GAC <> π΄ High Energy Collision 12, 27, 105, 109, 112...,159, 164, 180, 200 20+1:CTG
π’ @62 (20+3:ACT) πͺ Opposites β rplD_gene@202 20+11:TGA <> π΄ High Energy Collision 13, 17, 43, 48, 53, 131, 173, 189 20+3:ACT
π· @63 (20+1:CTG) πͺ Opposites β rplD_gene@7, 91, 140, 154, 168, 176, 184 204+1:GAC <> π΄ High Energy Collision 12, 27, 105, 109, 112...,159, 164, 180, 200 20+1:CTG
π’ @64 (201+1:AAG) πͺ Opposites β rplD_gene@19, 23, 124, 158, 183 3+7:TTC <> π΄ High Energy Collision 47, 74, 98, 99, 123, 132, 166, 194 201+1:AAG
π° @66 (3+7:TTC) πͺ Opposites β rplD_gene@47, 74, 98, 99, 123, 132, 166, 194 201+1:AAG <> π΄ High Energy Collision 19, 23, 124, 158, 183 3+7:TTC
π’ @67 (203+2:CAG) πͺ Opposites β rplD_gene@121, 186 5+6:GTC <> π΄ High Energy Collision 9, 30, 41, 46, 62, 90, 115, 136 203+2:CAG
π° @68 (202+5:GGC) πͺ Opposites β rplD_gene@59, 76, 89, 129, 177 20+14:CCG <> π΄ High Energy Collision 64, 66, 82, 103 202+5:GGC
π· @71 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rplD_gene@5, 94, 195 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 14, 28, 31, 32, 33...,167, 178, 193, 196 5+4:GTT
π’ @76 (203+2:CAG) πͺ Opposites β rplD_gene@121, 186 5+6:GTC <> π΄ High Energy Collision 9, 30, 41, 46, 62, 90, 115, 136 203+2:CAG
π’ @77 (20+16:CGT) πͺ Opposites β rplD_gene@36, 135, 172, 201 204+2:GCA <> π΄ High Energy Collision 21, 40, 44, 49, 67, 69, 79, 88, 114, 117 20+16:CGT
π° @78 (5+6:GTC) βπͺ Flow Figure8 + Opposites β rplD_gene@9, 30, 41, 46, 60, 62, 78, 90, 115, 136 203+2,5+5:CAG,TGG <> π΄ High Energy Collision 121, 186 5+6:GTC
π· @80 (204+5:CGC) πͺ Opposites β rplD_gene@8, 11, 26, 68, 104, 128, 161 204+3:GCG <> π΄π‘ Opposites 7, 61, 91, 102, 140...,168, 170, 176, 184 204+1,204+5:CGC,GAC
π° @81 (203+4:CCA) πͺ Opposites β rplD_gene@20, 38, 42, 54, 56, 71, 81, 151, 174 20+25:GGT <> Opposites :
π° @83 (20+1:CTG) πͺ Opposites β rplD_gene@7, 91, 140, 154, 168, 176, 184 204+1:GAC <> π΄ High Energy Collision 12, 27, 105, 109, 112...,159, 164, 180, 200 20+1:CTG
π· @84 (204+5:CGC) πͺ Opposites β rplD_gene@8, 11, 26, 68, 104, 128, 161 204+3:GCG <> π΄π‘ Opposites 7, 61, 91, 102, 140...,168, 170, 176, 184 204+1,204+5:CGC,GAC
π’ @88 (20+16:CGT) πͺ Opposites β rplD_gene@36, 135, 172, 201 204+2:GCA <> π΄ High Energy Collision 21, 40, 44, 49, 67, 69, 79, 88, 114, 117 20+16:CGT
π° @92 (20+1:CTG) πͺ Opposites β rplD_gene@7, 91, 140, 154, 168, 176, 184 204+1:GAC <> π΄ High Energy Collision 12, 27, 105, 109, 112...,159, 164, 180, 200 20+1:CTG
π· @93 (20+14:CCG) πͺ Opposites β rplD_gene@64, 66, 82, 103 202+5:GGC <> π΄ High Energy Collision 59, 76, 89, 129, 177 20+14:CCG
π° @95 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rplD_gene@5, 94, 195 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 14, 28, 31, 32, 33...,167, 178, 193, 196 5+4:GTT
π° @96 (20+5:ATG) πͺ Opposites β rplD_gene@101 20+8:TAC <> π΄ High Energy Collision 1, 100, 141, 188, 199 20+5:ATG
π° @97 (204+3:GCG) πͺ Opposites β rplD_gene@61, 102, 162, 170 204+5:CGC <> π΄ High Energy Collision 8, 11, 26, 68, 104, 128, 161 204+3:GCG
π° @99 (20+1:CTG) πͺ Opposites β rplD_gene@7, 91, 140, 154, 168, 176, 184 204+1:GAC <> π΄ High Energy Collision 12, 27, 105, 109, 112...,159, 164, 180, 200 20+1:CTG
π· @102 (204+2:GCA) πͺ Opposites β rplD_gene@21, 40, 44, 49, 67, 69, 79, 88, 114, 117 20+16:CGT <> π΄ High Energy Collision 36, 135, 172, 201 204+2:GCA
π° @103 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rplD_gene@5, 94, 195 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 14, 28, 31, 32, 33...,167, 178, 193, 196 5+4:GTT
π· @104 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rplD_gene@5, 94, 195 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 14, 28, 31, 32, 33...,167, 178, 193, 196 5+4:GTT
π° @106 (5+8:ACC) β Flow Figure8 β rplD_gene@15, 55, 110 5+7:TCC <> π΄ High Energy Collision 18, 65, 84, 150 5+8:ACC
π· @110 (5+4:GTT) βπͺ Flow Figure8 + Opposites β rplD_gene@5, 94, 195 203+1,5+3:CAA,TTG <> π΄ High Energy Collision 14, 28, 31, 32, 33...,167, 178, 193, 196 5+4:GTT
π· @111 (20+5:ATG) πͺ Opposites β rplD_gene@101 20+8:TAC <> π΄ High Energy Collision 1, 100, 141, 188, 199 20+5:ATG
π’ @112 (20+3:ACT) πͺ Opposites β rplD_gene@202 20+11:TGA <> π΄ High Energy Collision 13, 17, 43, 48, 53, 131, 173, 189 20+3:ACT
π· @114 (20+16:CGT) πͺ Opposites β rplD_gene@36, 135, 172, 201 204+2:GCA <> π΄ High Energy Collision 21, 40, 44, 49, 67, 69, 79, 88, 114, 117 20+16:CGT
π° @115 (204+2:GCA) πͺ Opposites β rplD_gene@21, 40, 44, 49, 67, 69, 79, 88, 114, 117 20+16:CGT <> π΄ High Energy Collision 36, 135, 172, 201 204+2:GCA
π· @116 (204+3:GCG) πͺ Opposites β rplD_gene@61, 102, 162, 170 204+5:CGC <> π΄ High Energy Collision 8, 11, 26, 68, 104, 128, 161 204+3:GCG
π· @117 (204+5:CGC) πͺ Opposites β rplD_gene@8, 11, 26, 68, 104, 128, 161 204+3:GCG <> π΄π‘ Opposites 7, 61, 91, 102, 140...,168, 170, 176, 184 204+1,204+5:CGC,GAC
π° @118 (203+2:CAG) πͺ Opposites β rplD_gene@121, 186 5+6:GTC <> π΄ High Energy Collision 9, 30, 41, 46, 62, 90, 115, 136 203+2:CAG
π° @123 (202+5:GGC) πͺ Opposites β rplD_gene@59, 76, 89, 129, 177 20+14:CCG <> π΄ High Energy Collision 64, 66, 82, 103 202+5:GGC
π· @128 (20+8:TAC) πͺ Opposites β rplD_gene@1, 100, 141, 188, 199 20+5:ATG <> π΄ High Energy Collision 101 20+8:TAC
π° @1 (20+5:ATG) πͺ Opposites β rpsF_gene@4, 25, 49, 59 20+8:TAC <> π΄ High Energy Collision 1, 9, 21, 62, 88, 90, 102 20+5:ATG
π° @3 (20+5:ATG) πͺ Opposites β rpsF_gene@4, 25, 49, 59 20+8:TAC <> π΄ High Energy Collision 1, 9, 21, 62, 88, 90, 102 20+5:ATG
π° @4 (203+1:CAA) πͺ Opposites β rpsF_gene@7, 18, 60, 64, 84, 89, 96, 103 5+4:GTT <> Opposites :
π· @6 (20+14:CCG) πͺ Opposites β rpsF_gene@20, 34, 43 202+5:GGC <> π΄ High Energy Collision 19, 50, 67, 101 20+14:CCG
π· @8 (204+3:GCG) πͺ Opposites β rpsF_gene@24, 44, 79, 86, 109, 113 204+5:CGC <> π΄ High Energy Collision 105 204+3:GCG
π° @10 (20+5:ATG) πͺ Opposites β rpsF_gene@4, 25, 49, 59 20+8:TAC <> π΄ High Energy Collision 1, 9, 21, 62, 88, 90, 102 20+5:ATG
π° @11 (20+1:CTG) πͺ Opposites β rpsF_gene@13, 41, 107 204+1:GAC <> π΄ High Energy Collision 39, 47, 54, 61, 74 20+1:CTG
π· @13 (20+16:CGT) πͺ Opposites β rpsF_gene@32, 57, 99, 117 204+2:GCA <> π΄ High Energy Collision 2, 38, 45, 91, 110, 112 20+16:CGT
π· @15 (20+16:CGT) πͺ Opposites β rpsF_gene@32, 57, 99, 117 204+2:GCA <> π΄ High Energy Collision 2, 38, 45, 91, 110, 112 20+16:CGT
π° @18 (203+2:CAG) πͺ Opposites β rpsF_gene@10 5+6:GTC <> π΄ High Energy Collision 14, 17, 46, 68 203+2:CAG
π° @20 (204+3:GCG) πͺ Opposites β rpsF_gene@24, 44, 79, 86, 109, 113 204+5:CGC <> π΄ High Energy Collision 105 204+3:GCG
π° @24 (204+3:GCG) πͺ Opposites β rpsF_gene@24, 44, 79, 86, 109, 113 204+5:CGC <> π΄ High Energy Collision 105 204+3:GCG
π° @25 (5+6:GTC) βπͺ Flow Figure8 + Opposites β rpsF_gene@14, 17, 42, 46, 68 203+2,5+5:CAG,TGG <> π΄ High Energy Collision 10 5+6:GTC
π° @27 (20+5:ATG) πͺ Opposites β rpsF_gene@4, 25, 49, 59 20+8:TAC <> π΄ High Energy Collision 1, 9, 21, 62, 88, 90, 102 20+5:ATG
π’ @28 (3+8:CCT) π Structural Lock Key β rpsF_gene@78, 80, 116 3+7:TTC <> π΄ High Energy Collision 12 3+8:CCT
π’ @29 (5+7:TCC) β Flow Figure8 β rpsF_gene@77, 92, 97, 120 5+8:ACC <> Flow Figure8 :
π’ @30 (5+7:TCC) β Flow Figure8 β rpsF_gene@77, 92, 97, 120 5+8:ACC <> Flow Figure8 :
π’ @31 (201+1:AAG) πͺ Opposites β rpsF_gene@78, 80, 116 3+7:TTC <> π΄ High Energy Collision 35, 93, 127 201+1,201+5:AAG,GGG
π° @32 (20+1:CTG) πͺ Opposites β rpsF_gene@13, 41, 107 204+1:GAC <> π΄ High Energy Collision 39, 47, 54, 61, 74 20+1:CTG
π° @34 (20+23:GTG) πͺ Opposites β rpsF_gene@37, 55, 58, 94 20+13:CAC <> π΄ High Energy Collision 70 20+23:GTG
π° @35 (204+2:GCA) πͺ Opposites β rpsF_gene@2, 38, 45, 91, 110, 112 20+16:CGT <> π΄ High Energy Collision 32, 57, 99, 117 204+2:GCA
π° @39 (20+23:GTG) πͺ Opposites β rpsF_gene@37, 55, 58, 94 20+13:CAC <> π΄ High Energy Collision 70 20+23:GTG
π° @40 (20+1:CTG) πͺ Opposites β rpsF_gene@13, 41, 107 204+1:GAC <> π΄ High Energy Collision 39, 47, 54, 61, 74 20+1:CTG
π’ @41 (201+1:AAG) πͺ Opposites β rpsF_gene@78, 80, 116 3+7:TTC <> π΄ High Energy Collision 35, 93, 127 201+1,201+5:AAG,GGG
π° @53 (202+5:GGC) πͺ Opposites β rpsF_gene@19, 50, 67, 101 20+14:CCG <> π΄ High Energy Collision 20, 34, 43 202+5:GGC
π° @54 (204+1:GAC) πͺ Opposites β rpsF_gene@39, 47, 54, 61, 74 20+1:CTG <> π΄π‘βοΈ Opposites 13, 24, 41, 44, 53...,106, 107, 109, 113 204+1,204+5,205+1:AAA,CGC,GAC
π· @56 (201+1:AAG) πͺ Opposites β rpsF_gene@78, 80, 116 3+7:TTC <> π΄ High Energy Collision 35, 93, 127 201+1,201+5:AAG,GGG
π· @57 (3+8:CCT) π Structural Lock Key β rpsF_gene@78, 80, 116 3+7:TTC <> π΄ High Energy Collision 12 3+8:CCT
π· @59 (20+1:CTG) πͺ Opposites β rpsF_gene@13, 41, 107 204+1:GAC <> π΄ High Energy Collision 39, 47, 54, 61, 74 20+1:CTG
π· @63 (20+1:CTG) πͺ Opposites β rpsF_gene@13, 41, 107 204+1:GAC <> π΄ High Energy Collision 39, 47, 54, 61, 74 20+1:CTG
π· @64 (201+1:AAG) πͺ Opposites β rpsF_gene@78, 80, 116 3+7:TTC <> π΄ High Energy Collision 35, 93, 127 201+1,201+5:AAG,GGG
π· @66 (3+7:TTC) πͺπ Opposites + Structural Lock Key β rpsF_gene@12, 35, 93 201+1,3+8:AAG,CCT <> π΄ High Energy Collision 78, 80, 116 3+7:TTC
π’ @67 (203+2:CAG) πͺ Opposites β rpsF_gene@10 5+6:GTC <> π΄ High Energy Collision 14, 17, 46, 68 203+2:CAG
π° @68 (202+5:GGC) πͺ Opposites β rpsF_gene@19, 50, 67, 101 20+14:CCG <> π΄ High Energy Collision 20, 34, 43 202+5:GGC
π’ @72 (20+22:GTA) πͺ Opposites β rpsF_gene@3, 11 20+2:CAT <> Opposites :
π’ @76 (203+2:CAG) πͺ Opposites β rpsF_gene@10 5+6:GTC <> π΄ High Energy Collision 14, 17, 46, 68 203+2:CAG
π· @77 (20+16:CGT) πͺ Opposites β rpsF_gene@32, 57, 99, 117 204+2:GCA <> π΄ High Energy Collision 2, 38, 45, 91, 110, 112 20+16:CGT
π· @78 (5+6:GTC) βπͺ Flow Figure8 + Opposites β rpsF_gene@14, 17, 42, 46, 68 203+2,5+5:CAG,TGG <> π΄ High Energy Collision 10 5+6:GTC
π· @80 (204+5:CGC) πͺ Opposites β rpsF_gene@105 204+3:GCG <> π΄π‘ Opposites 13, 24, 41, 44, 79, 86, 107, 109, 113 204+1,204+5:CGC,GAC
π’ @81 (203+4:CCA) πͺ Opposites β rpsF_gene@31 20+25:GGT <> Opposites :
π· @83 (20+1:CTG) πͺ Opposites β rpsF_gene@13, 41, 107 204+1:GAC <> π΄ High Energy Collision 39, 47, 54, 61, 74 20+1:CTG
π· @84 (204+5:CGC) πͺ Opposites β rpsF_gene@105 204+3:GCG <> π΄π‘ Opposites 13, 24, 41, 44, 79, 86, 107, 109, 113 204+1,204+5:CGC,GAC
π· @88 (20+16:CGT) πͺ Opposites β rpsF_gene@32, 57, 99, 117 204+2:GCA <> π΄ High Energy Collision 2, 38, 45, 91, 110, 112 20+16:CGT
π· @92 (20+1:CTG) πͺ Opposites β rpsF_gene@13, 41, 107 204+1:GAC <> π΄ High Energy Collision 39, 47, 54, 61, 74 20+1:CTG
π’ @93 (20+14:CCG) πͺ Opposites β rpsF_gene@20, 34, 43 202+5:GGC <> π΄ High Energy Collision 19, 50, 67, 101 20+14:CCG
π’ @96 (20+5:ATG) πͺ Opposites β rpsF_gene@4, 25, 49, 59 20+8:TAC <> π΄ High Energy Collision 1, 9, 21, 62, 88, 90, 102 20+5:ATG
π· @97 (204+3:GCG) πͺ Opposites β rpsF_gene@24, 44, 79, 86, 109, 113 204+5:CGC <> π΄ High Energy Collision 105 204+3:GCG
π° @99 (20+1:CTG) πͺ Opposites β rpsF_gene@13, 41, 107 204+1:GAC <> π΄ High Energy Collision 39, 47, 54, 61, 74 20+1:CTG
π° @102 (204+2:GCA) πͺ Opposites β rpsF_gene@2, 38, 45, 91, 110, 112 20+16:CGT <> π΄ High Energy Collision 32, 57, 99, 117 204+2:GCA
π’ @111 (20+5:ATG) πͺ Opposites β rpsF_gene@4, 25, 49, 59 20+8:TAC <> π΄ High Energy Collision 1, 9, 21, 62, 88, 90, 102 20+5:ATG
π° @114 (20+16:CGT) πͺ Opposites β rpsF_gene@32, 57, 99, 117 204+2:GCA <> π΄ High Energy Collision 2, 38, 45, 91, 110, 112 20+16:CGT
π° @115 (204+2:GCA) πͺ Opposites β rpsF_gene@2, 38, 45, 91, 110, 112 20+16:CGT <> π΄ High Energy Collision 32, 57, 99, 117 204+2:GCA
π° @116 (204+3:GCG) πͺ Opposites β rpsF_gene@24, 44, 79, 86, 109, 113 204+5:CGC <> π΄ High Energy Collision 105 204+3:GCG
π· @117 (204+5:CGC) πͺ Opposites β rpsF_gene@105 204+3:GCG <> π΄π‘ Opposites 13, 24, 41, 44, 79, 86, 107, 109, 113 204+1,204+5:CGC,GAC
π’ @118 (203+2:CAG) πͺ Opposites β rpsF_gene@10 5+6:GTC <> π΄ High Energy Collision 14, 17, 46, 68 203+2:CAG
π· @123 (202+5:GGC) πͺ Opposites β rpsF_gene@19, 50, 67, 101 20+14:CCG <> π΄ High Energy Collision 20, 34, 43 202+5:GGC
π· @128 (20+8:TAC) πͺ Opposites β rpsF_gene@1, 9, 21, 62, 88, 90, 102 20+5:ATG <> π΄ High Energy Collision 4, 25, 49, 59 20+8:TAC
π’ @129 (20+22:GTA) πͺ Opposites β rpsF_gene@3, 11 20+2:CAT <> Opposites :
π‘ Assembly Insights:
β’ Bond strength: unknown
β’ Coordination type: unknown
No rna features found for partner gene: {partner_sequence['gene_id']}
No rna features found for partner gene: {partner_sequence['gene_id']}
No rna features found for partner gene: {partner_sequence['gene_id']}
𧬠RNA rrsB_gene (1542 nucleotides)
============================================================
π The RNA landscape...
πΈ Sticky loop 1-8 (8), π Bump-1 26, πΈ Sticky loop 557-562 (6), πΈ Sticky loop 913-920 (8), πΈ Sticky loop 1397-1400 (4), πΈ Sticky loop 1502-1505 (4), π Sticky hub 1530-1542 (13)
π Medium stem 9-25 - (4-pair stem - open loops: πΈ Sticky loop 13-21 (9)
10 rpsH_gene flipped: 62,112
11 rpsH_gene normal: 4
11 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
21 rpsH_gene normal: 6,93
22 rpsH_gene flipped: 2,74,79
23 rpsH_gene symmetric: 91
25 rpsH_gene flipped: 11,32,40,59,63,83,92,99
25 rpsH_gene normal: 25,78
πΈ Sticky loop 13-21 (9) with 29 candidates
13 rpsH_gene flipped: 4
13 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
14 rpsH_gene normal: 62,112
16 rpsH_gene flipped: 5,9,48,90,113
18 rpsH_gene flipped: 1,3,10,27,96,111
18 rpsH_gene normal: 72,129
19 rpsH_gene normal: 128
20 rpsH_gene normal: 25,78
20 rpsH_gene flipped: 81
π Medium stem 27-550 - (4-pair stem - open loops: π Bump-1 31
29 rpsH_gene flipped: 4
29 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
30 rpsH_gene normal: 62,112
31 rpsH_gene flipped: 66
π Medium stem 32-556 - (6-pair stem - open loops: π Bump-1 38, π° Bump-2 404-405, π° Bump-2 498-499, π Bump-1 546
32 rpsH_gene flipped: 51,71,95,103,104,110
33 rpsH_gene flipped: 13,15,77,88,114
33 rpsH_gene normal: 127
34 rpsH_gene symmetric: 8,20,24,97,116
35 rpsH_gene flipped: 2,74,79
36 rpsH_gene flipped: 18,67,76,118
36 rpsH_gene normal: 54
37 rpsH_gene normal: 25,78
37 rpsH_gene flipped: 81
38 rpsH_gene normal: 6,93
405 rpsH_gene symmetric: 105,107
499 rpsH_gene flipped: 23,70,119
539 rpsH_gene flipped: 28,57
539 rpsH_gene normal: 29,30
541 rpsH_gene flipped: 25,78
541 rpsH_gene normal: 81
543 rpsH_gene flipped: 35,102,115
544 rpsH_gene normal: 13,15,77,88,114
544 rpsH_gene flipped: 127
545 rpsH_gene normal: 51,71,95,103,104,110
546 rpsH_gene normal: 66
547 rpsH_gene flipped: 23,70,119
548 rpsH_gene symmetric: 80,84,117
549 rpsH_gene normal: 35,102,115
550 rpsH_gene normal: 4
550 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
π° Bump-2 498-499 with 1 candidates
498 rpsH_gene normal: 66
βοΈ Belt 39-403 - (9-pair stem - open loops: πΈ Sticky loop 48-51 (4), πΈ Sticky loop 361-366 (6), π Bump-1 394, π Bump-1 397)
39 rpsH_gene symmetric: 80,84,117
40 rpsH_gene flipped: 6,93
41 rpsH_gene normal: 6,93
42 rpsH_gene normal: 13,15,77,88,114
42 rpsH_gene flipped: 127
43 rpsH_gene flipped: 11,32,40,59,63,83,92,99
43 rpsH_gene normal: 25,78
44 rpsH_gene flipped: 28,57
44 rpsH_gene normal: 29,30
45 rpsH_gene normal: 6,93
46 rpsH_gene flipped: 53,68,123
47 rpsH_gene flipped: 12,26,55,106
47 rpsH_gene normal: 66
358 rpsH_gene normal: 25,78
358 rpsH_gene flipped: 81
391 rpsH_gene normal: 13,15,77,88,114
391 rpsH_gene flipped: 127
392 rpsH_gene flipped: 11,32,40,59,63,83,92,99
392 rpsH_gene normal: 25,78
393 rpsH_gene flipped: 23,70,119
394 rpsH_gene flipped: 53,68,123
395 rpsH_gene normal: 17,44,82,98,100,109,120,122
395 rpsH_gene flipped: 29,30
396 rpsH_gene flipped: 1,3,10,27,96,111
396 rpsH_gene normal: 72,129
397 rpsH_gene normal: 128
398 rpsH_gene flipped: 35,102,115
399 rpsH_gene flipped: 53,68,123
400 rpsH_gene normal: 53,68,123
401 rpsH_gene symmetric: 8,20,24,97,116
402 rpsH_gene symmetric: 80,84,117
403 rpsH_gene normal: 35,102,115
πΈ Sticky loop 48-51 (4) with 11 candidates
48 rpsH_gene normal: 5,9,48,90,113
50 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 361-366 (6) with 7 candidates
361 rpsH_gene normal: 28,57
361 rpsH_gene flipped: 29,30
362 rpsH_gene flipped: 66
364 rpsH_gene symmetric: 65,86
π Short stem 52-357 - 3-pair stem - open loops: π Bump-1 55
52 rpsH_gene symmetric: 34,39
54 rpsH_gene flipped: 1,3,10,27,96,111
54 rpsH_gene normal: 72,129
55 rpsH_gene normal: 128
π Short stem 56-360 - 3-pair stem - open loops: π° Bump-2 59-60, πΈ Sticky loop 107-112 (6), π Bump-1 315, π Bump-1 338, π± Sticky-3 351-353
56 rpsH_gene flipped: 35,102,115
57 rpsH_gene normal: 13,15,77,88,114
57 rpsH_gene flipped: 127
58 rpsH_gene normal: 51,71,95,103,104,110
60 rpsH_gene flipped: 62,112
105 rpsH_gene symmetric: 80,84,117
106 rpsH_gene flipped: 6,93
112 rpsH_gene flipped: 25,78
112 rpsH_gene normal: 81
311 rpsH_gene normal: 17,44,82,98,100,109,120,122
311 rpsH_gene flipped: 29,30
312 rpsH_gene symmetric: 34,39
314 rpsH_gene symmetric: 34,39
353 rpsH_gene flipped: 23,70,119
354 rpsH_gene normal: 13,15,77,88,114
354 rpsH_gene flipped: 127
355 rpsH_gene flipped: 11,32,40,59,63,83,92,99
355 rpsH_gene normal: 25,78
356 rpsH_gene flipped: 62,112
π° Bump-2 59-60 with 1 candidates
59 rpsH_gene normal: 66
πΈ Sticky loop 107-112 (6) with 22 candidates
107 rpsH_gene normal: 28,57
107 rpsH_gene flipped: 29,30
108 rpsH_gene normal: 11,32,40,59,63,83,92,99
108 rpsH_gene flipped: 25,78
109 rpsH_gene flipped: 13,15,77,88,114
109 rpsH_gene normal: 127
110 rpsH_gene flipped: 6,93
π± Sticky-3 351-353 with 16 candidates
351 rpsH_gene normal: 13,15,77,88,114
351 rpsH_gene flipped: 127
352 rpsH_gene flipped: 11,32,40,59,63,83,92,99
352 rpsH_gene normal: 25,78
π Short stem 61-104 - 3-pair stem - open loops: π° Bump-2 64-65
61 rpsH_gene normal: 18,67,76,118
61 rpsH_gene flipped: 54
62 rpsH_gene normal: 2,74,79
63 rpsH_gene normal: 23,70,119
65 rpsH_gene flipped: 51,71,95,103,104,110
π° Bump-2 64-65 with 1 candidates
64 rpsH_gene flipped: 66
π Short stem 66-106 - 2-pair stem - open loops: π Bump-1 68, π° Bump-2 100-101
66 rpsH_gene flipped: 13,15,77,88,114
66 rpsH_gene normal: 127
67 rpsH_gene flipped: 6,93
68 rpsH_gene flipped: 25,78
68 rpsH_gene normal: 81
97 rpsH_gene normal: 11,32,40,59,63,83,92,99
97 rpsH_gene flipped: 25,78
98 rpsH_gene flipped: 13,15,77,88,114
98 rpsH_gene normal: 127
99 rpsH_gene normal: 23,70,119
101 rpsH_gene flipped: 62,112
103 rpsH_gene normal: 25,78
103 rpsH_gene flipped: 81
104 rpsH_gene normal: 6,93
π Short stem 69-96 - 2-pair stem - open loops: π° Bump-2 71-72
69 rpsH_gene flipped: 128
π° Bump-2 71-72 with 6 candidates
71 rpsH_gene flipped: 51,71,95,103,104,110
βοΈ Belt 73-99 - (10-pair stem - open loops: πΈ Sticky loop 83-86 (4), π Bump-1 94)
73 rpsH_gene flipped: 11,32,40,59,63,83,92,99
73 rpsH_gene normal: 25,78
74 rpsH_gene flipped: 28,57
74 rpsH_gene normal: 29,30
75 rpsH_gene normal: 28,57
75 rpsH_gene flipped: 29,30
76 rpsH_gene flipped: 66
77 rpsH_gene normal: 66
78 rpsH_gene symmetric: 105,107
79 rpsH_gene flipped: 66
80 rpsH_gene normal: 66
81 rpsH_gene flipped: 23,70,119
82 rpsH_gene flipped: 2,74,79
86 rpsH_gene flipped: 2,74,79
87 rpsH_gene flipped: 28,31,41,56,57,64
88 rpsH_gene normal: 28,31,41,56,57,64
90 rpsH_gene flipped: 28,31,41,56,57,64
92 rpsH_gene flipped: 4
92 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
93 rpsH_gene flipped: 35,102,115
94 rpsH_gene flipped: 2,74,79
95 rpsH_gene flipped: 18,67,76,118
95 rpsH_gene normal: 54
96 rpsH_gene normal: 62,112
πΈ Sticky loop 83-86 (4) with 19 candidates
83 rpsH_gene flipped: 28,31,41,56,57,64
84 rpsH_gene flipped: 4
84 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
85 rpsH_gene flipped: 35,102,115
π Short stem 113-310 - 3-pair stem - open loops: πΈ Sticky loop 116-121 (6), π° Bump-2 287-288
114 rpsH_gene normal: 62,112
121 rpsH_gene symmetric: 105,107
288 rpsH_gene flipped: 23,70,119
πΈ Sticky loop 116-121 (6) with 4 candidates
116 rpsH_gene flipped: 62,112
117 rpsH_gene flipped: 128
120 rpsH_gene normal: 128
βοΈ Belt 122-239 - (7-pair stem - open loops: π° Bump-2 129-130, π Bump-1 232)
122 rpsH_gene normal: 18,67,76,118
122 rpsH_gene flipped: 54
124 rpsH_gene flipped: 18,67,76,118
124 rpsH_gene normal: 54
125 rpsH_gene normal: 25,78
125 rpsH_gene flipped: 81
127 rpsH_gene normal: 28,57
127 rpsH_gene flipped: 29,30
128 rpsH_gene flipped: 66
130 rpsH_gene flipped: 51,71,95,103,104,110
232 rpsH_gene flipped: 53,68,123
234 rpsH_gene normal: 17,44,82,98,100,109,120,122
234 rpsH_gene flipped: 29,30
235 rpsH_gene flipped: 11,32,40,59,63,83,92,99
235 rpsH_gene normal: 25,78
236 rpsH_gene symmetric: 105,107
238 rpsH_gene normal: 128
239 rpsH_gene normal: 25,78
239 rpsH_gene flipped: 81
π Short stem 131-231 - 2-pair stem - open loops: π± Sticky-3 133-135, π° Bump-2 228-229
132 rpsH_gene flipped: 18,67,76,118
132 rpsH_gene normal: 54
135 rpsH_gene flipped: 12,26,55,106
135 rpsH_gene normal: 66
229 rpsH_gene symmetric: 105,107
231 rpsH_gene flipped: 35,102,115
π± Sticky-3 133-135 with 6 candidates
133 rpsH_gene flipped: 35,102,115
134 rpsH_gene flipped: 53,68,123
π° Bump-2 228-229 with 1 candidates
228 rpsH_gene normal: 128
βοΈ Belt 136-227 - (7-pair stem - open loops: π Bump-1 143, π Bump-1 179, π° Bump-2 196-197, π Bump-1 220)
136 rpsH_gene flipped: 18,67,76,118
136 rpsH_gene normal: 54
137 rpsH_gene normal: 62,112
139 rpsH_gene normal: 128
140 rpsH_gene normal: 25,78
140 rpsH_gene flipped: 81
141 rpsH_gene normal: 28,57
141 rpsH_gene flipped: 29,30
143 rpsH_gene flipped: 28,57
143 rpsH_gene normal: 29,30
179 rpsH_gene symmetric: 65,86
197 rpsH_gene symmetric: 105,107
218 rpsH_gene flipped: 4
218 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
219 rpsH_gene flipped: 35,102,115
220 rpsH_gene flipped: 53,68,123
221 rpsH_gene normal: 17,44,82,98,100,109,120,122
221 rpsH_gene flipped: 29,30
222 rpsH_gene flipped: 1,3,10,27,96,111
222 rpsH_gene normal: 72,129
223 rpsH_gene flipped: 5,9,48,90,113
224 rpsH_gene normal: 2,74,79
225 rpsH_gene flipped: 6,93
226 rpsH_gene normal: 28,57
226 rpsH_gene flipped: 29,30
π° Bump-2 196-197 with 1 candidates
196 rpsH_gene normal: 66
π Short stem 144-178 - 1-pair stem - open loops: π Bump-1 145, π Bump-1 177
177 rpsH_gene normal: 13,15,77,88,114
177 rpsH_gene flipped: 127
178 rpsH_gene flipped: 1,3,10,27,96,111
178 rpsH_gene normal: 72,129
π Short stem 146-176 - 2-pair stem - open loops: πΈ Sticky five 148-152, πΈ Sticky loop 169-174 (6)
147 rpsH_gene normal: 28,57
147 rpsH_gene flipped: 29,30
174 rpsH_gene flipped: 17,44,82,98,100,109,120,122
174 rpsH_gene normal: 29,30
175 rpsH_gene normal: 53,68,123
176 rpsH_gene symmetric: 8,20,24,97,116
πΈ Sticky five 148-152 with 8 candidates
149 rpsH_gene symmetric: 65,86
151 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 169-174 (6) with 15 candidates
169 rpsH_gene normal: 5,9,48,90,113
172 rpsH_gene symmetric: 65,86
173 rpsH_gene normal: 1,3,10,27,96,111
173 rpsH_gene flipped: 72,129
π Medium stem 153-168 - (6-pair stem - open loops: πΈ Sticky loop 159-162 (4)
153 rpsH_gene normal: 5,9,48,90,113
154 rpsH_gene normal: 1,3,10,27,96,111
154 rpsH_gene flipped: 72,129
156 rpsH_gene flipped: 18,67,76,118
156 rpsH_gene normal: 54
157 rpsH_gene normal: 25,78
157 rpsH_gene flipped: 81
158 rpsH_gene normal: 28,57
158 rpsH_gene flipped: 29,30
162 rpsH_gene flipped: 13,15,77,88,114
162 rpsH_gene normal: 127
163 rpsH_gene flipped: 6,93
164 rpsH_gene flipped: 25,78
164 rpsH_gene normal: 81
165 rpsH_gene flipped: 128
167 rpsH_gene flipped: 23,70,119
168 rpsH_gene flipped: 2,74,79
πΈ Sticky loop 159-162 (4) with 7 candidates
159 rpsH_gene flipped: 66
161 rpsH_gene flipped: 51,71,95,103,104,110
π Short stem 180-195 - 1-pair stem - open loops: π± Sticky-3 181-183, π Bump-1 194
183 rpsH_gene normal: 35,102,115
194 rpsH_gene normal: 51,71,95,103,104,110
π± Sticky-3 181-183 with 12 candidates
181 rpsH_gene flipped: 51,71,95,103,104,110
182 rpsH_gene flipped: 13,15,77,88,114
182 rpsH_gene normal: 127
π Short stem 184-193 - 3-pair stem - open loops: πΈ Sticky loop 187-190 (4)
184 rpsH_gene normal: 18,67,76,118
184 rpsH_gene flipped: 54
185 rpsH_gene normal: 2,74,79
186 rpsH_gene symmetric: 8,20,24,97,116
190 rpsH_gene symmetric: 105,107
191 rpsH_gene normal: 11,32,40,59,63,83,92,99
191 rpsH_gene flipped: 25,78
192 rpsH_gene flipped: 17,44,82,98,100,109,120,122
192 rpsH_gene normal: 29,30
193 rpsH_gene normal: 17,44,82,98,100,109,120,122
193 rpsH_gene flipped: 29,30
πΈ Sticky loop 187-190 (4) with 13 candidates
187 rpsH_gene normal: 13,15,77,88,114
187 rpsH_gene flipped: 127
188 rpsH_gene normal: 51,71,95,103,104,110
189 rpsH_gene normal: 66
π Medium stem 198-217 - (6-pair stem - open loops: π° Bump-2 204-205
199 rpsH_gene flipped: 28,57
199 rpsH_gene normal: 29,30
203 rpsH_gene normal: 28,57
203 rpsH_gene flipped: 29,30
205 rpsH_gene flipped: 17,44,82,98,100,109,120,122
205 rpsH_gene normal: 29,30
π° Bump-2 204-205 with 10 candidates
204 rpsH_gene normal: 11,32,40,59,63,83,92,99
204 rpsH_gene flipped: 25,78
π Short stem 206-219 - 2-pair stem - open loops: πΈ Sticky loop 208-211 (4)
206 rpsH_gene flipped: 12,26,55,106
206 rpsH_gene normal: 66
207 rpsH_gene flipped: 28,31,41,56,57,64
212 rpsH_gene normal: 6,93
213 rpsH_gene flipped: 53,68,123
214 rpsH_gene flipped: 12,26,55,106
214 rpsH_gene normal: 66
215 rpsH_gene symmetric: 91
217 rpsH_gene flipped: 28,31,41,56,57,64
πΈ Sticky loop 208-211 (4) with 11 candidates
208 rpsH_gene normal: 28,31,41,56,57,64
209 rpsH_gene normal: 2,74,79
210 rpsH_gene flipped: 6,93
π Short stem 240-286 - 3-pair stem - open loops: πΈ Sticky loop 243-246 (4), πΈ Sticky loop 278-283 (6)
241 rpsH_gene normal: 28,57
241 rpsH_gene flipped: 29,30
246 rpsH_gene flipped: 23,70,119
270 rpsH_gene flipped: 17,44,82,98,100,109,120,122
270 rpsH_gene normal: 29,30
271 rpsH_gene flipped: 12,26,55,106
271 rpsH_gene normal: 66
272 rpsH_gene normal: 5,9,48,90,113
274 rpsH_gene flipped: 28,57
274 rpsH_gene normal: 29,30
275 rpsH_gene normal: 6,93
276 rpsH_gene symmetric: 80,84,117
277 rpsH_gene normal: 23,70,119
283 rpsH_gene normal: 12,26,55,106
283 rpsH_gene flipped: 66
285 rpsH_gene flipped: 12,26,55,106
285 rpsH_gene normal: 66
286 rpsH_gene normal: 5,9,48,90,113
πΈ Sticky loop 278-283 (6) with 24 candidates
278 rpsH_gene normal: 11,32,40,59,63,83,92,99
278 rpsH_gene flipped: 25,78
279 rpsH_gene flipped: 13,15,77,88,114
279 rpsH_gene normal: 127
280 rpsH_gene normal: 23,70,119
282 rpsH_gene flipped: 5,9,48,90,113
π Short stem 247-269 - 3-pair stem - open loops: π° Bump-2 250-251
247 rpsH_gene flipped: 2,74,79
248 rpsH_gene normal: 5,9,48,90,113
251 rpsH_gene flipped: 128
π° Bump-2 250-251 with 2 candidates
250 rpsH_gene flipped: 62,112
βοΈ Belt 252-277 - (8-pair stem - open loops: πΈ Sticky loop 260-266 (7))
253 rpsH_gene flipped: 28,57
253 rpsH_gene normal: 29,30
254 rpsH_gene flipped: 25,78
254 rpsH_gene normal: 81
256 rpsH_gene normal: 25,78
256 rpsH_gene flipped: 81
259 rpsH_gene flipped: 25,78
259 rpsH_gene normal: 81
266 rpsH_gene flipped: 2,74,79
267 rpsH_gene symmetric: 91
269 rpsH_gene symmetric: 34,39
πΈ Sticky loop 260-266 (7) with 17 candidates
260 rpsH_gene flipped: 128
262 rpsH_gene flipped: 51,71,95,103,104,110
263 rpsH_gene flipped: 13,15,77,88,114
263 rpsH_gene normal: 127
264 rpsH_gene flipped: 6,93
265 rpsH_gene normal: 6,93
βοΈ Belt 289-314 - (8-pair stem - open loops: πΈ Sticky loop 297-300 (4), π± Sticky-3 305-307)
289 rpsH_gene flipped: 2,74,79
290 rpsH_gene flipped: 18,67,76,118
290 rpsH_gene normal: 54
291 rpsH_gene normal: 25,78
291 rpsH_gene flipped: 81
292 rpsH_gene flipped: 25,78
292 rpsH_gene normal: 81
293 rpsH_gene normal: 18,67,76,118
293 rpsH_gene flipped: 54
295 rpsH_gene flipped: 18,67,76,118
295 rpsH_gene normal: 54
296 rpsH_gene normal: 62,112
300 rpsH_gene flipped: 28,57
300 rpsH_gene normal: 29,30
301 rpsH_gene normal: 28,57
301 rpsH_gene flipped: 29,30
303 rpsH_gene normal: 128
304 rpsH_gene normal: 62,112
307 rpsH_gene normal: 17,44,82,98,100,109,120,122
307 rpsH_gene flipped: 29,30
308 rpsH_gene flipped: 11,32,40,59,63,83,92,99
308 rpsH_gene normal: 25,78
309 rpsH_gene flipped: 23,70,119
310 rpsH_gene flipped: 53,68,123
πΈ Sticky loop 297-300 (4) with 2 candidates
298 rpsH_gene symmetric: 105,107
π± Sticky-3 305-307 with 20 candidates
305 rpsH_gene normal: 11,32,40,59,63,83,92,99
305 rpsH_gene flipped: 25,78
306 rpsH_gene flipped: 17,44,82,98,100,109,120,122
306 rpsH_gene normal: 29,30
π Medium stem 316-337 - (5-pair stem - open loops: π Sticky hub 321-332 (12)
316 rpsH_gene flipped: 18,67,76,118
316 rpsH_gene normal: 54
317 rpsH_gene normal: 25,78
317 rpsH_gene flipped: 81
318 rpsH_gene normal: 28,57
318 rpsH_gene flipped: 29,30
319 rpsH_gene flipped: 66
320 rpsH_gene flipped: 51,71,95,103,104,110
332 rpsH_gene normal: 18,67,76,118
332 rpsH_gene flipped: 54
333 rpsH_gene normal: 12,26,55,106
333 rpsH_gene flipped: 66
334 rpsH_gene normal: 17,44,82,98,100,109,120,122
334 rpsH_gene flipped: 29,30
335 rpsH_gene flipped: 11,32,40,59,63,83,92,99
335 rpsH_gene normal: 25,78
336 rpsH_gene symmetric: 105,107
337 rpsH_gene normal: 11,32,40,59,63,83,92,99
337 rpsH_gene flipped: 25,78
π Sticky hub 321-332 (12) with 32 candidates
322 rpsH_gene flipped: 18,67,76,118
322 rpsH_gene normal: 54
323 rpsH_gene normal: 62,112
325 rpsH_gene symmetric: 105,107
326 rpsH_gene normal: 11,32,40,59,63,83,92,99
326 rpsH_gene flipped: 25,78
328 rpsH_gene symmetric: 34,39
329 rpsH_gene flipped: 13,15,77,88,114
329 rpsH_gene normal: 127
330 rpsH_gene flipped: 6,93
331 rpsH_gene flipped: 25,78
331 rpsH_gene normal: 81
π Medium stem 339-350 - (4-pair stem - open loops: πΈ Sticky loop 343-346 (4)
339 rpsH_gene symmetric: 91
340 rpsH_gene normal: 12,26,55,106
340 rpsH_gene flipped: 66
341 rpsH_gene flipped: 12,26,55,106
341 rpsH_gene normal: 66
342 rpsH_gene normal: 5,9,48,90,113
347 rpsH_gene normal: 28,57
347 rpsH_gene flipped: 29,30
349 rpsH_gene flipped: 28,57
349 rpsH_gene normal: 29,30
350 rpsH_gene normal: 6,93
πΈ Sticky loop 343-346 (4) with 16 candidates
343 rpsH_gene normal: 1,3,10,27,96,111
343 rpsH_gene flipped: 72,129
344 rpsH_gene flipped: 13,15,77,88,114
344 rpsH_gene normal: 127
345 rpsH_gene flipped: 6,93
π Short stem 367-390 - 1-pair stem - open loops: π Bump-1 368
367 rpsH_gene flipped: 4
367 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
368 rpsH_gene flipped: 35,102,115
π Short stem 369-393 - 3-pair stem - open loops: π± Sticky-3 372-374, π Bump-1 389
369 rpsH_gene normal: 13,15,77,88,114
369 rpsH_gene flipped: 127
370 rpsH_gene symmetric: 34,39
374 rpsH_gene normal: 128
389 rpsH_gene normal: 128
390 rpsH_gene flipped: 35,102,115
π± Sticky-3 372-374 with 6 candidates
372 rpsH_gene normal: 51,71,95,103,104,110
π Medium stem 375-388 - (5-pair stem - open loops: πΈ Sticky loop 380-383 (4)
375 rpsH_gene normal: 25,78
375 rpsH_gene flipped: 81
377 rpsH_gene normal: 6,93
378 rpsH_gene symmetric: 80,84,117
379 rpsH_gene symmetric: 8,20,24,97,116
383 rpsH_gene flipped: 23,70,119
384 rpsH_gene flipped: 53,68,123
385 rpsH_gene flipped: 12,26,55,106
385 rpsH_gene normal: 66
386 rpsH_gene flipped: 18,67,76,118
386 rpsH_gene normal: 54
387 rpsH_gene normal: 62,112
πΈ Sticky loop 380-383 (4) with 13 candidates
380 rpsH_gene normal: 13,15,77,88,114
380 rpsH_gene flipped: 127
381 rpsH_gene normal: 51,71,95,103,104,110
382 rpsH_gene normal: 66
π Medium stem 406-436 - (4-pair stem - open loops: πΈ Sticky loop 410-415 (6), πΈ Sticky five 428-432
406 rpsH_gene flipped: 128
408 rpsH_gene normal: 128
409 rpsH_gene normal: 62,112
415 rpsH_gene flipped: 28,57
415 rpsH_gene normal: 29,30
432 rpsH_gene flipped: 62,112
433 rpsH_gene flipped: 128
434 rpsH_gene normal: 1,3,10,27,96,111
434 rpsH_gene flipped: 72,129
436 rpsH_gene flipped: 28,31,41,56,57,64
πΈ Sticky loop 410-415 (6) with 6 candidates
410 rpsH_gene flipped: 66
411 rpsH_gene normal: 66
412 rpsH_gene symmetric: 105,107
413 rpsH_gene flipped: 66
414 rpsH_gene normal: 66
πΈ Sticky five 428-432 with 2 candidates
428 rpsH_gene flipped: 128
431 rpsH_gene normal: 66
π Medium stem 416-427 - (4-pair stem - open loops: πΈ Sticky loop 420-423 (4)
416 rpsH_gene normal: 6,93
417 rpsH_gene flipped: 53,68,123
418 rpsH_gene flipped: 12,26,55,106
418 rpsH_gene normal: 66
419 rpsH_gene flipped: 28,31,41,56,57,64
424 rpsH_gene flipped: 25,78
424 rpsH_gene normal: 81
425 rpsH_gene normal: 4
425 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
426 rpsH_gene flipped: 4
426 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
427 rpsH_gene symmetric: 105,107
πΈ Sticky loop 420-423 (4) with 11 candidates
420 rpsH_gene normal: 28,31,41,56,57,64
421 rpsH_gene normal: 2,74,79
422 rpsH_gene flipped: 6,93
π Medium stem 437-497 - (4-pair stem - open loops: π Bump-1 441, π Bump-1 493
438 rpsH_gene normal: 28,31,41,56,57,64
440 rpsH_gene flipped: 11,32,40,59,63,83,92,99
440 rpsH_gene normal: 25,78
441 rpsH_gene flipped: 23,70,119
493 rpsH_gene symmetric: 105,107
494 rpsH_gene flipped: 66
495 rpsH_gene normal: 66
496 rpsH_gene symmetric: 105,107
497 rpsH_gene flipped: 66
π Medium stem 442-492 - (5-pair stem - open loops: π Bump-1 447, π Bump-1 487
442 rpsH_gene symmetric: 80,84,117
443 rpsH_gene flipped: 6,93
446 rpsH_gene normal: 28,57
446 rpsH_gene flipped: 29,30
487 rpsH_gene flipped: 17,44,82,98,100,109,120,122
487 rpsH_gene normal: 29,30
489 rpsH_gene normal: 53,68,123
490 rpsH_gene symmetric: 8,20,24,97,116
491 rpsH_gene normal: 13,15,77,88,114
491 rpsH_gene flipped: 127
492 rpsH_gene flipped: 11,32,40,59,63,83,92,99
492 rpsH_gene normal: 25,78
π Short stem 448-486 - 1-pair stem - open loops: π Bump-1 449, π° Bump-2 484-485
448 rpsH_gene flipped: 28,57
448 rpsH_gene normal: 29,30
449 rpsH_gene normal: 28,57
449 rpsH_gene flipped: 29,30
486 rpsH_gene normal: 1,3,10,27,96,111
486 rpsH_gene flipped: 72,129
π° Bump-2 484-485 with 10 candidates
484 rpsH_gene normal: 4
484 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
π Short stem 450-483 - 1-pair stem - open loops: πΈ Sticky loop 451-454 (4), πΈ Sticky five 478-482
450 rpsH_gene flipped: 66
454 rpsH_gene normal: 28,57
454 rpsH_gene flipped: 29,30
482 rpsH_gene flipped: 13,15,77,88,114
482 rpsH_gene normal: 127
483 rpsH_gene normal: 35,102,115
πΈ Sticky loop 451-454 (4) with 5 candidates
451 rpsH_gene normal: 66
452 rpsH_gene flipped: 28,57
452 rpsH_gene normal: 29,30
πΈ Sticky five 478-482 with 22 candidates
479 rpsH_gene flipped: 4
479 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
480 rpsH_gene normal: 62,112
481 rpsH_gene normal: 11,32,40,59,63,83,92,99
481 rpsH_gene flipped: 25,78
βοΈ Belt 455-477 - (8-pair stem - open loops: πΈ Sticky loop 463-469 (7))
456 rpsH_gene flipped: 62,112
457 rpsH_gene flipped: 128
460 rpsH_gene normal: 66
461 rpsH_gene flipped: 62,112
462 rpsH_gene normal: 4
462 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
469 rpsH_gene flipped: 12,26,55,106
469 rpsH_gene normal: 66
470 rpsH_gene flipped: 28,31,41,56,57,64
472 rpsH_gene flipped: 4
472 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
473 rpsH_gene flipped: 35,102,115
474 rpsH_gene flipped: 2,74,79
475 rpsH_gene symmetric: 91
477 rpsH_gene flipped: 1,3,10,27,96,111
477 rpsH_gene normal: 72,129
πΈ Sticky loop 463-469 (7) with 20 candidates
466 rpsH_gene symmetric: 65,86
467 rpsH_gene normal: 1,3,10,27,96,111
467 rpsH_gene flipped: 72,129
468 rpsH_gene flipped: 17,44,82,98,100,109,120,122
468 rpsH_gene normal: 29,30
π Medium stem 500-538 - (5-pair stem - open loops: πΈ Sticky loop 505-510 (6)
500 rpsH_gene normal: 13,15,77,88,114
500 rpsH_gene flipped: 127
501 rpsH_gene symmetric: 34,39
502 rpsH_gene flipped: 17,44,82,98,100,109,120,122
502 rpsH_gene normal: 29,30
503 rpsH_gene normal: 53,68,123
504 rpsH_gene flipped: 6,93
πΈ Sticky loop 505-510 (6) with 16 candidates
505 rpsH_gene normal: 6,93
506 rpsH_gene flipped: 2,74,79
507 rpsH_gene normal: 5,9,48,90,113
509 rpsH_gene flipped: 51,71,95,103,104,110
βοΈ Belt 511-545 - (7-pair stem - open loops: π± Sticky-3 518-520, πΈ Sticky five 529-533)
511 rpsH_gene symmetric: 91
512 rpsH_gene normal: 12,26,55,106
512 rpsH_gene flipped: 66
513 rpsH_gene normal: 53,68,123
514 rpsH_gene normal: 35,102,115
516 rpsH_gene flipped: 35,102,115
517 rpsH_gene flipped: 53,68,123
520 rpsH_gene flipped: 23,70,119
533 rpsH_gene symmetric: 65,86
534 rpsH_gene normal: 1,3,10,27,96,111
534 rpsH_gene flipped: 72,129
535 rpsH_gene flipped: 13,15,77,88,114
535 rpsH_gene normal: 127
536 rpsH_gene flipped: 6,93
537 rpsH_gene normal: 28,57
537 rpsH_gene flipped: 29,30
π± Sticky-3 518-520 with 20 candidates
518 rpsH_gene normal: 17,44,82,98,100,109,120,122
518 rpsH_gene flipped: 29,30
519 rpsH_gene flipped: 11,32,40,59,63,83,92,99
519 rpsH_gene normal: 25,78
πΈ Sticky five 529-533 with 4 candidates
529 rpsH_gene flipped: 25,78
529 rpsH_gene normal: 81
530 rpsH_gene flipped: 128
π Short stem 521-528 - 2-pair stem - open loops: πΈ Sticky loop 523-526 (4)
521 rpsH_gene normal: 13,15,77,88,114
521 rpsH_gene flipped: 127
522 rpsH_gene flipped: 11,32,40,59,63,83,92,99
522 rpsH_gene normal: 25,78
526 rpsH_gene symmetric: 8,20,24,97,116
527 rpsH_gene symmetric: 80,84,117
528 rpsH_gene flipped: 6,93
πΈ Sticky loop 523-526 (4) with 9 candidates
523 rpsH_gene flipped: 23,70,119
524 rpsH_gene flipped: 53,68,123
525 rpsH_gene normal: 53,68,123
π Short stem 563-881 - 1-pair stem - open loops: π± Sticky-3 564-566
π± Sticky-3 564-566 with 8 candidates
564 rpsH_gene flipped: 18,67,76,118
564 rpsH_gene normal: 54
565 rpsH_gene normal: 25,78
565 rpsH_gene flipped: 81
π Short stem 567-884 - 3-pair stem - open loops: πΈ Sticky loop 570-576 (7), π Bump-1 765, πΈ Sticky loop 814-820 (7), π Bump-1 880
567 rpsH_gene normal: 6,93
568 rpsH_gene symmetric: 80,84,117
569 rpsH_gene normal: 35,102,115
576 rpsH_gene symmetric: 8,20,24,97,116
765 rpsH_gene flipped: 66
820 rpsH_gene symmetric: 105,107
880 rpsH_gene symmetric: 8,20,24,97,116
881 rpsH_gene flipped: 53,68,123
πΈ Sticky loop 570-576 (7) with 8 candidates
570 rpsH_gene flipped: 128
573 rpsH_gene normal: 66
574 rpsH_gene flipped: 23,70,119
575 rpsH_gene symmetric: 80,84,117
πΈ Sticky loop 814-820 (7) with 16 candidates
815 rpsH_gene flipped: 51,71,95,103,104,110
816 rpsH_gene flipped: 13,15,77,88,114
816 rpsH_gene normal: 127
817 rpsH_gene normal: 23,70,119
819 rpsH_gene normal: 128
π Medium stem 577-764 - (4-pair stem - open loops: π± Sticky-3 581-583, π± Sticky-3 758-760
577 rpsH_gene normal: 13,15,77,88,114
577 rpsH_gene flipped: 127
578 rpsH_gene symmetric: 34,39
579 rpsH_gene flipped: 13,15,77,88,114
579 rpsH_gene normal: 127
580 rpsH_gene symmetric: 8,20,24,97,116
583 rpsH_gene flipped: 28,57
583 rpsH_gene normal: 29,30
760 rpsH_gene flipped: 25,78
760 rpsH_gene normal: 81
762 rpsH_gene flipped: 35,102,115
763 rpsH_gene symmetric: 80,84,117
764 rpsH_gene normal: 23,70,119
π± Sticky-3 581-583 with 16 candidates
581 rpsH_gene normal: 13,15,77,88,114
581 rpsH_gene flipped: 127
582 rpsH_gene flipped: 11,32,40,59,63,83,92,99
582 rpsH_gene normal: 25,78
π± Sticky-3 758-760 with 14 candidates
758 rpsH_gene flipped: 11,32,40,59,63,83,92,99
758 rpsH_gene normal: 25,78
759 rpsH_gene flipped: 28,57
759 rpsH_gene normal: 29,30
π Short stem 584-756 - 3-pair stem - open loops: π Bump-1 587, π° Bump-2 652-653
584 rpsH_gene normal: 6,93
585 rpsH_gene symmetric: 80,84,117
586 rpsH_gene flipped: 6,93
587 rpsH_gene flipped: 25,78
587 rpsH_gene normal: 81
650 rpsH_gene flipped: 2,74,79
651 rpsH_gene flipped: 28,31,41,56,57,64
653 rpsH_gene normal: 62,112
π° Bump-2 652-653 with 10 candidates
652 rpsH_gene flipped: 4
652 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
βοΈ Belt 588-649 - (7-pair stem - open loops: π Bump-1 595)
588 rpsH_gene normal: 4
588 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
590 rpsH_gene flipped: 4
590 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
591 rpsH_gene symmetric: 105,107
592 rpsH_gene normal: 4
592 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
595 rpsH_gene normal: 66
βοΈ Belt 596-651 - (11-pair stem - open loops: πΈ Sticky five 607-611, π± Sticky-3 629-631, π° Bump-2 641-642)
596 rpsH_gene flipped: 62,112
597 rpsH_gene normal: 18,67,76,118
597 rpsH_gene flipped: 54
599 rpsH_gene flipped: 11,32,40,59,63,83,92,99
599 rpsH_gene normal: 25,78
600 rpsH_gene symmetric: 105,107
602 rpsH_gene normal: 128
603 rpsH_gene symmetric: 105,107
605 rpsH_gene normal: 62,112
606 rpsH_gene flipped: 66
631 rpsH_gene flipped: 18,67,76,118
631 rpsH_gene normal: 54
632 rpsH_gene flipped: 35,102,115
633 rpsH_gene normal: 13,15,77,88,114
633 rpsH_gene flipped: 127
634 rpsH_gene flipped: 1,3,10,27,96,111
634 rpsH_gene normal: 72,129
635 rpsH_gene flipped: 5,9,48,90,113
637 rpsH_gene flipped: 18,67,76,118
637 rpsH_gene normal: 54
638 rpsH_gene normal: 62,112
640 rpsH_gene symmetric: 65,86
643 rpsH_gene flipped: 18,67,76,118
643 rpsH_gene normal: 54
644 rpsH_gene normal: 25,78
644 rpsH_gene flipped: 81
645 rpsH_gene normal: 6,93
646 rpsH_gene normal: 13,15,77,88,114
646 rpsH_gene flipped: 127
647 rpsH_gene normal: 51,71,95,103,104,110
648 rpsH_gene normal: 66
649 rpsH_gene flipped: 23,70,119
πΈ Sticky five 607-611 with 10 candidates
609 rpsH_gene flipped: 5,9,48,90,113
610 rpsH_gene normal: 12,26,55,106
610 rpsH_gene flipped: 66
π± Sticky-3 629-631 with 6 candidates
629 rpsH_gene flipped: 51,71,95,103,104,110
π° Bump-2 641-642 with 8 candidates
641 rpsH_gene normal: 1,3,10,27,96,111
641 rpsH_gene flipped: 72,129
π Medium stem 612-628 - (6-pair stem - open loops: πΈ Sticky five 618-622
613 rpsH_gene normal: 53,68,123
614 rpsH_gene flipped: 6,93
616 rpsH_gene normal: 6,93
617 rpsH_gene flipped: 2,74,79
622 rpsH_gene flipped: 17,44,82,98,100,109,120,122
622 rpsH_gene normal: 29,30
623 rpsH_gene flipped: 12,26,55,106
623 rpsH_gene normal: 66
624 rpsH_gene flipped: 18,67,76,118
624 rpsH_gene normal: 54
625 rpsH_gene normal: 25,78
625 rpsH_gene flipped: 81
627 rpsH_gene normal: 28,57
627 rpsH_gene flipped: 29,30
628 rpsH_gene flipped: 66
πΈ Sticky five 618-622 with 13 candidates
618 rpsH_gene symmetric: 91
620 rpsH_gene normal: 51,71,95,103,104,110
621 rpsH_gene flipped: 51,71,95,103,104,110
βοΈ Belt 654-757 - (9-pair stem - open loops: π± Sticky-3 663-665, π° Bump-2 741-742, π Bump-1 747, π° Bump-2 752-753)
655 rpsH_gene flipped: 62,112
656 rpsH_gene normal: 18,67,76,118
656 rpsH_gene flipped: 54
658 rpsH_gene symmetric: 91
659 rpsH_gene normal: 2,74,79
660 rpsH_gene normal: 35,102,115
661 rpsH_gene flipped: 128
665 rpsH_gene flipped: 28,57
665 rpsH_gene normal: 29,30
742 rpsH_gene normal: 11,32,40,59,63,83,92,99
742 rpsH_gene flipped: 25,78
743 rpsH_gene flipped: 13,15,77,88,114
743 rpsH_gene normal: 127
744 rpsH_gene normal: 23,70,119
745 rpsH_gene flipped: 66
746 rpsH_gene normal: 66
747 rpsH_gene symmetric: 105,107
748 rpsH_gene normal: 11,32,40,59,63,83,92,99
748 rpsH_gene flipped: 25,78
750 rpsH_gene flipped: 18,67,76,118
750 rpsH_gene normal: 54
751 rpsH_gene normal: 62,112
753 rpsH_gene flipped: 13,15,77,88,114
753 rpsH_gene normal: 127
754 rpsH_gene symmetric: 8,20,24,97,116
755 rpsH_gene flipped: 2,74,79
756 rpsH_gene symmetric: 91
π± Sticky-3 663-665 with 2 candidates
663 rpsH_gene symmetric: 105,107
π° Bump-2 741-742 with 4 candidates
741 rpsH_gene normal: 28,57
741 rpsH_gene flipped: 29,30
π° Bump-2 752-753 with 10 candidates
752 rpsH_gene normal: 11,32,40,59,63,83,92,99
752 rpsH_gene flipped: 25,78
βοΈ Belt 666-740 - (8-pair stem - open loops: π± Sticky-3 674-676, π± Sticky-3 714-716, πΈ Sticky loop 718-724 (7), π Bump-1 733)
670 rpsH_gene flipped: 25,78
670 rpsH_gene normal: 81
671 rpsH_gene flipped: 128
673 rpsH_gene symmetric: 105,107
716 rpsH_gene symmetric: 65,86
717 rpsH_gene normal: 1,3,10,27,96,111
717 rpsH_gene flipped: 72,129
724 rpsH_gene normal: 6,93
733 rpsH_gene normal: 6,93
734 rpsH_gene flipped: 53,68,123
738 rpsH_gene flipped: 12,26,55,106
738 rpsH_gene normal: 66
739 rpsH_gene flipped: 18,67,76,118
739 rpsH_gene normal: 54
740 rpsH_gene normal: 25,78
740 rpsH_gene flipped: 81
π± Sticky-3 674-676 with 1 candidates
674 rpsH_gene flipped: 66
π± Sticky-3 714-716 with 1 candidates
714 rpsH_gene flipped: 66
πΈ Sticky loop 718-724 (7) with 21 candidates
718 rpsH_gene flipped: 17,44,82,98,100,109,120,122
718 rpsH_gene normal: 29,30
719 rpsH_gene normal: 53,68,123
720 rpsH_gene flipped: 6,93
721 rpsH_gene flipped: 25,78
721 rpsH_gene normal: 81
723 rpsH_gene normal: 25,78
723 rpsH_gene flipped: 81
βοΈ Belt 677-713 - (8-pair stem - open loops: π Bump-1 685, π Bump-1 705)
677 rpsH_gene normal: 28,31,41,56,57,64
678 rpsH_gene normal: 12,26,55,106
678 rpsH_gene flipped: 66
679 rpsH_gene normal: 17,44,82,98,100,109,120,122
679 rpsH_gene flipped: 29,30
680 rpsH_gene flipped: 11,32,40,59,63,83,92,99
680 rpsH_gene normal: 25,78
681 rpsH_gene flipped: 28,57
681 rpsH_gene normal: 29,30
682 rpsH_gene flipped: 25,78
682 rpsH_gene normal: 81
684 rpsH_gene symmetric: 105,107
685 rpsH_gene flipped: 128
706 rpsH_gene flipped: 5,9,48,90,113
708 rpsH_gene flipped: 18,67,76,118
708 rpsH_gene normal: 54
709 rpsH_gene normal: 25,78
709 rpsH_gene flipped: 81
710 rpsH_gene normal: 28,57
710 rpsH_gene flipped: 29,30
712 rpsH_gene flipped: 28,57
712 rpsH_gene normal: 29,30
713 rpsH_gene normal: 28,57
713 rpsH_gene flipped: 29,30
π Short stem 686-704 - 1-pair stem - open loops: π Bump-1 687, πΈ Sticky loop 700-703 (4)
687 rpsH_gene flipped: 23,70,119
704 rpsH_gene symmetric: 105,107
πΈ Sticky loop 700-703 (4) with 3 candidates
700 rpsH_gene flipped: 128
702 rpsH_gene symmetric: 105,107
π Short stem 688-699 - 3-pair stem - open loops: πΈ Sticky loop 691-696 (6)
688 rpsH_gene symmetric: 80,84,117
689 rpsH_gene flipped: 6,93
690 rpsH_gene flipped: 25,78
690 rpsH_gene normal: 81
696 rpsH_gene normal: 128
697 rpsH_gene flipped: 35,102,115
698 rpsH_gene symmetric: 80,84,117
699 rpsH_gene normal: 35,102,115
πΈ Sticky loop 691-696 (6) with 3 candidates
692 rpsH_gene normal: 62,112
693 rpsH_gene flipped: 66
π Short stem 725-732 - 2-pair stem - open loops: πΈ Sticky loop 727-730 (4)
725 rpsH_gene symmetric: 80,84,117
726 rpsH_gene normal: 23,70,119
730 rpsH_gene normal: 6,93
731 rpsH_gene symmetric: 80,84,117
732 rpsH_gene flipped: 6,93
πΈ Sticky loop 727-730 (4) with 6 candidates
727 rpsH_gene flipped: 66
728 rpsH_gene normal: 66
729 rpsH_gene flipped: 28,57
729 rpsH_gene normal: 29,30
π Short stem 766-813 - 1-pair stem - open loops: π° Bump-2 767-768, π° Bump-2 811-812
768 rpsH_gene flipped: 23,70,119
810 rpsH_gene normal: 53,68,123
812 rpsH_gene flipped: 128
π° Bump-2 767-768 with 1 candidates
767 rpsH_gene normal: 66
π° Bump-2 811-812 with 3 candidates
811 rpsH_gene normal: 35,102,115
βοΈ Belt 769-809 - (7-pair stem - open loops: π± Sticky-3 776-778)
769 rpsH_gene symmetric: 80,84,117
770 rpsH_gene normal: 35,102,115
772 rpsH_gene normal: 25,78
772 rpsH_gene flipped: 81
775 rpsH_gene normal: 28,57
775 rpsH_gene flipped: 29,30
778 rpsH_gene normal: 13,15,77,88,114
778 rpsH_gene flipped: 127
π± Sticky-3 776-778 with 3 candidates
777 rpsH_gene flipped: 23,70,119
π Short stem 779-810 - 1-pair stem - open loops: π± Sticky-3 780-782, π± Sticky-3 800-802
779 rpsH_gene normal: 51,71,95,103,104,110
802 rpsH_gene flipped: 62,112
803 rpsH_gene normal: 18,67,76,118
803 rpsH_gene flipped: 54
804 rpsH_gene normal: 12,26,55,106
804 rpsH_gene flipped: 66
805 rpsH_gene normal: 17,44,82,98,100,109,120,122
805 rpsH_gene flipped: 29,30
806 rpsH_gene symmetric: 34,39
807 rpsH_gene flipped: 13,15,77,88,114
807 rpsH_gene normal: 127
808 rpsH_gene symmetric: 8,20,24,97,116
809 rpsH_gene flipped: 53,68,123
π± Sticky-3 780-782 with 6 candidates
781 rpsH_gene flipped: 51,71,95,103,104,110
π± Sticky-3 800-802 with 1 candidates
800 rpsH_gene flipped: 128
π Medium stem 783-799 - (4-pair stem - open loops: πΈ Sticky loop 787-795 (9)
783 rpsH_gene flipped: 11,32,40,59,63,83,92,99
783 rpsH_gene normal: 25,78
784 rpsH_gene flipped: 28,57
784 rpsH_gene normal: 29,30
785 rpsH_gene normal: 28,57
785 rpsH_gene flipped: 29,30
796 rpsH_gene flipped: 12,26,55,106
796 rpsH_gene normal: 66
797 rpsH_gene flipped: 18,67,76,118
797 rpsH_gene normal: 54
798 rpsH_gene normal: 25,78
798 rpsH_gene flipped: 81
799 rpsH_gene flipped: 25,78
799 rpsH_gene normal: 81
πΈ Sticky loop 787-795 (9) with 22 candidates
790 rpsH_gene symmetric: 105,107
792 rpsH_gene symmetric: 65,86
793 rpsH_gene normal: 1,3,10,27,96,111
793 rpsH_gene flipped: 72,129
794 rpsH_gene flipped: 17,44,82,98,100,109,120,122
794 rpsH_gene normal: 29,30
βοΈ Belt 821-879 - (7-pair stem - open loops: π Bump-1 828, π± Sticky-3 858-860, πΈ Sticky loop 869-872 (4))
821 rpsH_gene normal: 18,67,76,118
821 rpsH_gene flipped: 54
822 rpsH_gene normal: 2,74,79
823 rpsH_gene normal: 23,70,119
824 rpsH_gene normal: 11,32,40,59,63,83,92,99
824 rpsH_gene flipped: 25,78
826 rpsH_gene flipped: 28,31,41,56,57,64
827 rpsH_gene flipped: 4
827 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
828 rpsH_gene normal: 25,78
828 rpsH_gene flipped: 81
860 rpsH_gene flipped: 23,70,119
872 rpsH_gene normal: 66
873 rpsH_gene flipped: 62,112
874 rpsH_gene normal: 18,67,76,118
874 rpsH_gene flipped: 54
875 rpsH_gene normal: 2,74,79
876 rpsH_gene normal: 23,70,119
877 rpsH_gene normal: 11,32,40,59,63,83,92,99
877 rpsH_gene flipped: 25,78
878 rpsH_gene flipped: 17,44,82,98,100,109,120,122
878 rpsH_gene normal: 29,30
879 rpsH_gene normal: 53,68,123
π± Sticky-3 858-860 with 4 candidates
858 rpsH_gene normal: 28,57
858 rpsH_gene flipped: 29,30
πΈ Sticky loop 869-872 (4) with 10 candidates
869 rpsH_gene normal: 4
869 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
βοΈ Belt 829-857 - (12-pair stem - open loops: πΈ Sticky five 841-845)
829 rpsH_gene normal: 28,57
829 rpsH_gene flipped: 29,30
831 rpsH_gene flipped: 28,57
831 rpsH_gene normal: 29,30
832 rpsH_gene flipped: 25,78
832 rpsH_gene normal: 81
833 rpsH_gene normal: 4
833 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
834 rpsH_gene flipped: 4
834 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
835 rpsH_gene symmetric: 105,107
837 rpsH_gene flipped: 35,102,115
838 rpsH_gene flipped: 53,68,123
840 rpsH_gene flipped: 12,26,55,106
840 rpsH_gene normal: 66
845 rpsH_gene flipped: 28,57
845 rpsH_gene normal: 29,30
846 rpsH_gene normal: 6,93
847 rpsH_gene symmetric: 80,84,117
848 rpsH_gene normal: 35,102,115
850 rpsH_gene normal: 25,78
850 rpsH_gene flipped: 81
851 rpsH_gene normal: 6,93
852 rpsH_gene flipped: 2,74,79
853 rpsH_gene flipped: 28,31,41,56,57,64
854 rpsH_gene normal: 28,31,41,56,57,64
855 rpsH_gene normal: 12,26,55,106
855 rpsH_gene flipped: 66
856 rpsH_gene normal: 53,68,123
857 rpsH_gene flipped: 6,93
πΈ Sticky five 841-845 with 18 candidates
841 rpsH_gene flipped: 28,31,41,56,57,64
842 rpsH_gene flipped: 4
842 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
843 rpsH_gene normal: 62,112
π Short stem 861-868 - 2-pair stem - open loops: πΈ Sticky loop 863-866 (4)
861 rpsH_gene flipped: 2,74,79
862 rpsH_gene normal: 5,9,48,90,113
866 rpsH_gene symmetric: 8,20,24,97,116
867 rpsH_gene symmetric: 80,84,117
868 rpsH_gene normal: 35,102,115
πΈ Sticky loop 863-866 (4) with 12 candidates
864 rpsH_gene flipped: 51,71,95,103,104,110
865 rpsH_gene flipped: 13,15,77,88,114
865 rpsH_gene normal: 127
π Short stem 885-912 - 3-pair stem - open loops: π± Sticky-3 888-890, π° Bump-2 908-909
887 rpsH_gene normal: 28,57
887 rpsH_gene flipped: 29,30
890 rpsH_gene flipped: 128
910 rpsH_gene symmetric: 91
912 rpsH_gene normal: 51,71,95,103,104,110
π± Sticky-3 888-890 with 2 candidates
889 rpsH_gene flipped: 62,112
π° Bump-2 908-909 with 6 candidates
908 rpsH_gene flipped: 51,71,95,103,104,110
π Short stem 891-907 - 1-pair stem - open loops: π° Bump-2 892-893, π Bump-1 906
891 rpsH_gene normal: 1,3,10,27,96,111
891 rpsH_gene flipped: 72,129
893 rpsH_gene flipped: 6,93
π° Bump-2 892-893 with 6 candidates
892 rpsH_gene flipped: 13,15,77,88,114
892 rpsH_gene normal: 127
π Medium stem 894-905 - (4-pair stem - open loops: πΈ Sticky loop 898-901 (4)
894 rpsH_gene normal: 6,93
895 rpsH_gene flipped: 53,68,123
896 rpsH_gene normal: 53,68,123
897 rpsH_gene symmetric: 8,20,24,97,116
901 rpsH_gene flipped: 28,57
901 rpsH_gene normal: 29,30
902 rpsH_gene flipped: 25,78
902 rpsH_gene normal: 81
903 rpsH_gene normal: 4
903 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
πΈ Sticky loop 898-901 (4) with 13 candidates
898 rpsH_gene normal: 13,15,77,88,114
898 rpsH_gene flipped: 127
899 rpsH_gene normal: 51,71,95,103,104,110
900 rpsH_gene normal: 66
π Medium stem 921-1396 - (5-pair stem - open loops: π Bump-1 926, π Bump-1 1394
921 rpsH_gene normal: 62,112
922 rpsH_gene normal: 11,32,40,59,63,83,92,99
922 rpsH_gene flipped: 25,78
923 rpsH_gene flipped: 13,15,77,88,114
923 rpsH_gene normal: 127
924 rpsH_gene flipped: 6,93
1395 rpsH_gene symmetric: 34,39
βοΈ Belt 927-1393 - (7-pair stem - open loops: π Bump-1 934, π± Sticky-3 1381-1383)
928 rpsH_gene normal: 6,93
929 rpsH_gene flipped: 53,68,123
931 rpsH_gene normal: 53,68,123
932 rpsH_gene symmetric: 8,20,24,97,116
933 rpsH_gene normal: 13,15,77,88,114
933 rpsH_gene flipped: 127
934 rpsH_gene symmetric: 34,39
1383 rpsH_gene normal: 53,68,123
1384 rpsH_gene flipped: 6,93
1386 rpsH_gene normal: 6,93
1387 rpsH_gene flipped: 53,68,123
1388 rpsH_gene flipped: 12,26,55,106
1388 rpsH_gene normal: 66
1389 rpsH_gene flipped: 28,31,41,56,57,64
1390 rpsH_gene flipped: 4
1390 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1391 rpsH_gene symmetric: 105,107
1392 rpsH_gene flipped: 128
1393 rpsH_gene normal: 1,3,10,27,96,111
1393 rpsH_gene flipped: 72,129
π± Sticky-3 1381-1383 with 5 candidates
1381 rpsH_gene normal: 12,26,55,106
1381 rpsH_gene flipped: 66
π Short stem 935-1380 - 2-pair stem - open loops: π° Bump-2 937-938, π± Sticky-3 1345-1347, πΈ Sticky loop 1375-1378 (4)
936 rpsH_gene normal: 51,71,95,103,104,110
938 rpsH_gene flipped: 23,70,119
1347 rpsH_gene flipped: 128
1378 rpsH_gene normal: 35,102,115
1379 rpsH_gene normal: 4
1379 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1380 rpsH_gene normal: 28,31,41,56,57,64
π° Bump-2 937-938 with 1 candidates
937 rpsH_gene normal: 66
π± Sticky-3 1345-1347 with 2 candidates
1346 rpsH_gene flipped: 62,112
πΈ Sticky loop 1375-1378 (4) with 16 candidates
1375 rpsH_gene symmetric: 65,86
1376 rpsH_gene normal: 1,3,10,27,96,111
1376 rpsH_gene flipped: 72,129
1377 rpsH_gene flipped: 13,15,77,88,114
1377 rpsH_gene normal: 127
π Medium stem 939-1344 - (5-pair stem - open loops: π° Bump-2 944-945, π Bump-1 1236, π° Bump-2 1338-1339
939 rpsH_gene symmetric: 80,84,117
940 rpsH_gene flipped: 6,93
941 rpsH_gene flipped: 25,78
941 rpsH_gene normal: 81
943 rpsH_gene normal: 25,78
943 rpsH_gene flipped: 81
1340 rpsH_gene flipped: 5,9,48,90,113
1341 rpsH_gene normal: 2,74,79
1342 rpsH_gene symmetric: 8,20,24,97,116
1343 rpsH_gene flipped: 2,74,79
1344 rpsH_gene normal: 5,9,48,90,113
π° Bump-2 944-945 with 4 candidates
944 rpsH_gene normal: 28,57
944 rpsH_gene flipped: 29,30
π° Bump-2 1338-1339 with 1 candidates
1338 rpsH_gene flipped: 66
βοΈ Belt 946-1235 - (10-pair stem - open loops: πΈ Sticky five 956-960, πΈ Sticky loop 975-983 (9), π± Sticky-3 1222-1224, π Bump-1 1227)
946 rpsH_gene flipped: 23,70,119
947 rpsH_gene normal: 13,15,77,88,114
947 rpsH_gene flipped: 127
948 rpsH_gene flipped: 1,3,10,27,96,111
948 rpsH_gene normal: 72,129
949 rpsH_gene normal: 128
950 rpsH_gene symmetric: 105,107
952 rpsH_gene normal: 25,78
952 rpsH_gene flipped: 81
953 rpsH_gene flipped: 25,78
953 rpsH_gene normal: 81
954 rpsH_gene normal: 4
954 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
960 rpsH_gene normal: 28,31,41,56,57,64
983 rpsH_gene flipped: 17,44,82,98,100,109,120,122
983 rpsH_gene normal: 29,30
1224 rpsH_gene normal: 1,3,10,27,96,111
1224 rpsH_gene flipped: 72,129
1226 rpsH_gene symmetric: 34,39
1228 rpsH_gene symmetric: 34,39
1229 rpsH_gene flipped: 13,15,77,88,114
1229 rpsH_gene normal: 127
1230 rpsH_gene normal: 35,102,115
1232 rpsH_gene flipped: 35,102,115
1233 rpsH_gene flipped: 2,74,79
1234 rpsH_gene normal: 5,9,48,90,113
1235 rpsH_gene normal: 1,3,10,27,96,111
1235 rpsH_gene flipped: 72,129
πΈ Sticky loop 975-983 (9) with 38 candidates
975 rpsH_gene symmetric: 105,107
976 rpsH_gene flipped: 66
977 rpsH_gene flipped: 51,71,95,103,104,110
978 rpsH_gene flipped: 17,44,82,98,100,109,120,122
978 rpsH_gene normal: 29,30
979 rpsH_gene flipped: 12,26,55,106
979 rpsH_gene normal: 66
980 rpsH_gene flipped: 28,31,41,56,57,64
982 rpsH_gene normal: 1,3,10,27,96,111
982 rpsH_gene flipped: 72,129
π± Sticky-3 1222-1224 with 8 candidates
1222 rpsH_gene flipped: 2,74,79
1223 rpsH_gene normal: 5,9,48,90,113
π Short stem 961-974 - 3-pair stem - open loops: πΈ Sticky loop 964-971 (8)
961 rpsH_gene normal: 2,74,79
962 rpsH_gene normal: 23,70,119
971 rpsH_gene symmetric: 80,84,117
972 rpsH_gene normal: 23,70,119
973 rpsH_gene flipped: 66
974 rpsH_gene normal: 66
πΈ Sticky loop 964-971 (8) with 33 candidates
964 rpsH_gene normal: 128
965 rpsH_gene flipped: 35,102,115
966 rpsH_gene normal: 13,15,77,88,114
966 rpsH_gene flipped: 127
967 rpsH_gene normal: 51,71,95,103,104,110
968 rpsH_gene flipped: 51,71,95,103,104,110
969 rpsH_gene flipped: 13,15,77,88,114
969 rpsH_gene normal: 127
970 rpsH_gene symmetric: 8,20,24,97,116
βοΈ Belt 984-1221 - (7-pair stem - open loops: πΈ Sticky loop 991-996 (6), π Bump-1 1045, π± Sticky-3 1212-1214)
984 rpsH_gene flipped: 12,26,55,106
984 rpsH_gene normal: 66
985 rpsH_gene flipped: 18,67,76,118
985 rpsH_gene normal: 54
986 rpsH_gene normal: 25,78
986 rpsH_gene flipped: 81
987 rpsH_gene flipped: 25,78
987 rpsH_gene normal: 81
988 rpsH_gene normal: 18,67,76,118
988 rpsH_gene flipped: 54
990 rpsH_gene flipped: 28,31,41,56,57,64
996 rpsH_gene flipped: 5,9,48,90,113
1045 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1045 rpsH_gene normal: 25,78
1206 rpsH_gene normal: 6,93
1207 rpsH_gene flipped: 53,68,123
1209 rpsH_gene flipped: 12,26,55,106
1209 rpsH_gene normal: 66
1210 rpsH_gene flipped: 28,31,41,56,57,64
1214 rpsH_gene normal: 23,70,119
1215 rpsH_gene normal: 11,32,40,59,63,83,92,99
1215 rpsH_gene flipped: 25,78
1216 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1216 rpsH_gene normal: 29,30
1217 rpsH_gene normal: 17,44,82,98,100,109,120,122
1217 rpsH_gene flipped: 29,30
1218 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1218 rpsH_gene normal: 25,78
1219 rpsH_gene flipped: 28,57
1219 rpsH_gene normal: 29,30
1221 rpsH_gene normal: 6,93
πΈ Sticky loop 991-996 (6) with 30 candidates
991 rpsH_gene flipped: 4
991 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
992 rpsH_gene normal: 62,112
993 rpsH_gene normal: 11,32,40,59,63,83,92,99
993 rpsH_gene flipped: 25,78
995 rpsH_gene flipped: 1,3,10,27,96,111
995 rpsH_gene normal: 72,129
π± Sticky-3 1212-1214 with 14 candidates
1212 rpsH_gene normal: 1,3,10,27,96,111
1212 rpsH_gene flipped: 72,129
1213 rpsH_gene flipped: 13,15,77,88,114
1213 rpsH_gene normal: 127
βοΈ Belt 997-1044 - (7-pair stem - open loops: π° Bump-2 1004-1005, π Bump-1 1024, π Bump-1 1042)
997 rpsH_gene normal: 12,26,55,106
997 rpsH_gene flipped: 66
998 rpsH_gene normal: 17,44,82,98,100,109,120,122
998 rpsH_gene flipped: 29,30
999 rpsH_gene symmetric: 34,39
1000 rpsH_gene flipped: 13,15,77,88,114
1000 rpsH_gene normal: 127
1001 rpsH_gene flipped: 6,93
1002 rpsH_gene normal: 28,57
1002 rpsH_gene flipped: 29,30
1003 rpsH_gene flipped: 66
1005 rpsH_gene flipped: 62,112
1042 rpsH_gene symmetric: 105,107
1043 rpsH_gene normal: 11,32,40,59,63,83,92,99
1043 rpsH_gene flipped: 25,78
π° Bump-2 1004-1005 with 1 candidates
1004 rpsH_gene normal: 66
βοΈ Belt 1006-1023 - (7-pair stem - open loops: πΈ Sticky loop 1013-1016 (4))
1006 rpsH_gene normal: 4
1006 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1009 rpsH_gene normal: 28,31,41,56,57,64
1011 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1011 rpsH_gene normal: 25,78
1012 rpsH_gene symmetric: 105,107
1016 rpsH_gene normal: 128
1017 rpsH_gene normal: 62,112
1019 rpsH_gene symmetric: 105,107
1020 rpsH_gene flipped: 66
1022 rpsH_gene normal: 128
1023 rpsH_gene symmetric: 105,107
πΈ Sticky loop 1013-1016 (4) with 2 candidates
1014 rpsH_gene symmetric: 105,107
π Short stem 1025-1041 - 1-pair stem - open loops: π Bump-1 1026, π Bump-1 1035
1025 rpsH_gene flipped: 35,102,115
1026 rpsH_gene flipped: 53,68,123
1035 rpsH_gene flipped: 51,71,95,103,104,110
1036 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1036 rpsH_gene normal: 29,30
1037 rpsH_gene normal: 53,68,123
1038 rpsH_gene normal: 35,102,115
1040 rpsH_gene normal: 62,112
π Short stem 1027-1034 - 2-pair stem - open loops: πΈ Sticky loop 1029-1032 (4)
1027 rpsH_gene flipped: 12,26,55,106
1027 rpsH_gene normal: 66
1028 rpsH_gene flipped: 28,31,41,56,57,64
1033 rpsH_gene normal: 28,57
1033 rpsH_gene flipped: 29,30
1034 rpsH_gene flipped: 66
πΈ Sticky loop 1029-1032 (4) with 11 candidates
1029 rpsH_gene normal: 28,31,41,56,57,64
1030 rpsH_gene normal: 2,74,79
1031 rpsH_gene flipped: 6,93
π Short stem 1046-1205 - 3-pair stem - open loops: π Bump-1 1049
1046 rpsH_gene flipped: 28,57
1046 rpsH_gene normal: 29,30
1047 rpsH_gene flipped: 25,78
1047 rpsH_gene normal: 81
1049 rpsH_gene flipped: 35,102,115
π Medium stem 1050-1209 - (4-pair stem - open loops: π° Bump-2 1054-1055
1050 rpsH_gene flipped: 2,74,79
1051 rpsH_gene flipped: 18,67,76,118
1051 rpsH_gene normal: 54
1052 rpsH_gene flipped: 35,102,115
1053 rpsH_gene normal: 13,15,77,88,114
1053 rpsH_gene flipped: 127
1055 rpsH_gene normal: 128
π° Bump-2 1054-1055 with 8 candidates
1054 rpsH_gene flipped: 1,3,10,27,96,111
1054 rpsH_gene normal: 72,129
π Medium stem 1056-1211 - (6-pair stem - open loops: π Bump-1 1062, π Bump-1 1194, π Bump-1 1196, π± Sticky-3 1200-1202
1056 rpsH_gene normal: 25,78
1056 rpsH_gene flipped: 81
1057 rpsH_gene normal: 6,93
1058 rpsH_gene flipped: 2,74,79
1059 rpsH_gene flipped: 18,67,76,118
1059 rpsH_gene normal: 54
1060 rpsH_gene symmetric: 105,107
1061 rpsH_gene normal: 18,67,76,118
1061 rpsH_gene flipped: 54
1062 rpsH_gene normal: 2,74,79
1195 rpsH_gene normal: 51,71,95,103,104,110
1196 rpsH_gene normal: 66
1197 rpsH_gene flipped: 62,112
1198 rpsH_gene normal: 18,67,76,118
1198 rpsH_gene flipped: 54
1203 rpsH_gene flipped: 1,3,10,27,96,111
1203 rpsH_gene normal: 72,129
1204 rpsH_gene normal: 128
1205 rpsH_gene normal: 25,78
1205 rpsH_gene flipped: 81
π± Sticky-3 1200-1202 with 13 candidates
1200 rpsH_gene flipped: 1,3,10,27,96,111
1200 rpsH_gene normal: 72,129
1201 rpsH_gene flipped: 5,9,48,90,113
π Short stem 1063-1193 - 2-pair stem - open loops: π± Sticky-3 1065-1067, πΈ Sticky five 1108-1112, πΈ Sticky loop 1188-1191 (4)
1063 rpsH_gene normal: 35,102,115
1064 rpsH_gene normal: 18,67,76,118
1064 rpsH_gene flipped: 54
1067 rpsH_gene flipped: 23,70,119
1191 rpsH_gene flipped: 13,15,77,88,114
1191 rpsH_gene normal: 127
1192 rpsH_gene normal: 35,102,115
1193 rpsH_gene normal: 18,67,76,118
1193 rpsH_gene flipped: 54
π± Sticky-3 1065-1067 with 10 candidates
1066 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1066 rpsH_gene normal: 25,78
πΈ Sticky five 1108-1112 with 28 candidates
1108 rpsH_gene normal: 13,15,77,88,114
1108 rpsH_gene flipped: 127
1109 rpsH_gene normal: 51,71,95,103,104,110
1110 rpsH_gene flipped: 51,71,95,103,104,110
1111 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1111 rpsH_gene normal: 29,30
πΈ Sticky loop 1188-1191 (4) with 13 candidates
1188 rpsH_gene normal: 128
1189 rpsH_gene normal: 62,112
1190 rpsH_gene normal: 11,32,40,59,63,83,92,99
1190 rpsH_gene flipped: 25,78
βοΈ Belt 1068-1107 - (9-pair stem - open loops: πΈ Sticky loop 1077-1080 (4), π° Bump-2 1084-1085, π° Bump-2 1100-1101)
1068 rpsH_gene flipped: 2,74,79
1069 rpsH_gene symmetric: 91
1070 rpsH_gene normal: 2,74,79
1071 rpsH_gene normal: 35,102,115
1073 rpsH_gene symmetric: 105,107
1074 rpsH_gene normal: 4
1074 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1075 rpsH_gene flipped: 4
1075 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1076 rpsH_gene symmetric: 105,107
1082 rpsH_gene normal: 128
1083 rpsH_gene symmetric: 105,107
1085 rpsH_gene flipped: 4
1085 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1101 rpsH_gene flipped: 51,71,95,103,104,110
1102 rpsH_gene flipped: 13,15,77,88,114
1102 rpsH_gene normal: 127
1103 rpsH_gene normal: 23,70,119
1105 rpsH_gene flipped: 23,70,119
1106 rpsH_gene symmetric: 80,84,117
1107 rpsH_gene symmetric: 8,20,24,97,116
πΈ Sticky loop 1077-1080 (4) with 3 candidates
1078 rpsH_gene normal: 62,112
1079 rpsH_gene flipped: 66
π° Bump-2 1084-1085 with 10 candidates
1084 rpsH_gene normal: 4
1084 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
π° Bump-2 1100-1101 with 6 candidates
1100 rpsH_gene normal: 51,71,95,103,104,110
π Medium stem 1086-1099 - (4-pair stem - open loops: πΈ Sticky loop 1090-1095 (6)
1086 rpsH_gene normal: 25,78
1086 rpsH_gene flipped: 81
1088 rpsH_gene flipped: 25,78
1088 rpsH_gene normal: 81
1089 rpsH_gene normal: 4
1089 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1095 rpsH_gene normal: 12,26,55,106
1095 rpsH_gene flipped: 66
1097 rpsH_gene normal: 53,68,123
1098 rpsH_gene symmetric: 8,20,24,97,116
1099 rpsH_gene normal: 13,15,77,88,114
1099 rpsH_gene flipped: 127
πΈ Sticky loop 1090-1095 (6) with 8 candidates
1092 rpsH_gene normal: 66
1093 rpsH_gene flipped: 62,112
1094 rpsH_gene normal: 18,67,76,118
1094 rpsH_gene flipped: 54
βοΈ Belt 1113-1187 - (12-pair stem - open loops: π Bump-1 1125, π° Bump-2 1147-1148, π° Bump-2 1156-1157, π Bump-1 1182)
1113 rpsH_gene flipped: 12,26,55,106
1113 rpsH_gene normal: 66
1114 rpsH_gene flipped: 28,31,41,56,57,64
1117 rpsH_gene flipped: 5,9,48,90,113
1118 rpsH_gene normal: 12,26,55,106
1118 rpsH_gene flipped: 66
1119 rpsH_gene flipped: 12,26,55,106
1119 rpsH_gene normal: 66
1120 rpsH_gene flipped: 28,31,41,56,57,64
1122 rpsH_gene flipped: 4
1122 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1123 rpsH_gene symmetric: 105,107
1124 rpsH_gene normal: 4
1124 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1125 rpsH_gene flipped: 4
1125 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1149 rpsH_gene normal: 51,71,95,103,104,110
1151 rpsH_gene normal: 66
1152 rpsH_gene flipped: 28,57
1152 rpsH_gene normal: 29,30
1153 rpsH_gene normal: 28,57
1153 rpsH_gene flipped: 29,30
1155 rpsH_gene symmetric: 105,107
1183 rpsH_gene normal: 25,78
1183 rpsH_gene flipped: 81
1186 rpsH_gene normal: 28,57
1186 rpsH_gene flipped: 29,30
π° Bump-2 1147-1148 with 1 candidates
1147 rpsH_gene symmetric: 91
π° Bump-2 1156-1157 with 10 candidates
1156 rpsH_gene normal: 11,32,40,59,63,83,92,99
1156 rpsH_gene flipped: 25,78
π Short stem 1126-1146 - 1-pair stem - open loops: π Bump-1 1127, π Bump-1 1145
1126 rpsH_gene flipped: 35,102,115
1127 rpsH_gene flipped: 53,68,123
1143 rpsH_gene normal: 28,57
1143 rpsH_gene flipped: 29,30
1144 rpsH_gene flipped: 66
1145 rpsH_gene flipped: 51,71,95,103,104,110
π Short stem 1128-1141 - 2-pair stem - open loops: π° Bump-2 1130-1131
1128 rpsH_gene normal: 17,44,82,98,100,109,120,122
1128 rpsH_gene flipped: 29,30
1129 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1129 rpsH_gene normal: 25,78
1131 rpsH_gene symmetric: 80,84,117
π° Bump-2 1130-1131 with 3 candidates
1130 rpsH_gene flipped: 23,70,119
π Short stem 1132-1144 - 3-pair stem - open loops: πΈ Sticky five 1135-1139
1132 rpsH_gene flipped: 6,93
1133 rpsH_gene flipped: 25,78
1133 rpsH_gene normal: 81
1134 rpsH_gene normal: 18,67,76,118
1134 rpsH_gene flipped: 54
1139 rpsH_gene flipped: 53,68,123
1140 rpsH_gene normal: 53,68,123
1141 rpsH_gene flipped: 6,93
πΈ Sticky five 1135-1139 with 12 candidates
1135 rpsH_gene normal: 12,26,55,106
1135 rpsH_gene flipped: 66
1136 rpsH_gene normal: 53,68,123
1137 rpsH_gene flipped: 6,93
1138 rpsH_gene normal: 6,93
π Short stem 1158-1181 - 1-pair stem - open loops: π° Bump-2 1159-1160, πΈ Sticky five 1176-1180
1158 rpsH_gene flipped: 18,67,76,118
1158 rpsH_gene normal: 54
1160 rpsH_gene flipped: 53,68,123
1180 rpsH_gene flipped: 28,57
1180 rpsH_gene normal: 29,30
1181 rpsH_gene flipped: 25,78
1181 rpsH_gene normal: 81
π° Bump-2 1159-1160 with 3 candidates
1159 rpsH_gene flipped: 35,102,115
πΈ Sticky five 1176-1180 with 10 candidates
1176 rpsH_gene flipped: 28,57
1176 rpsH_gene normal: 29,30
1177 rpsH_gene normal: 28,57
1177 rpsH_gene flipped: 29,30
1178 rpsH_gene flipped: 66
1179 rpsH_gene normal: 66
π Medium stem 1161-1175 - (5-pair stem - open loops: πΈ Sticky five 1166-1170
1161 rpsH_gene normal: 17,44,82,98,100,109,120,122
1161 rpsH_gene flipped: 29,30
1162 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1162 rpsH_gene normal: 25,78
1163 rpsH_gene flipped: 62,112
1165 rpsH_gene normal: 62,112
1170 rpsH_gene flipped: 51,71,95,103,104,110
1172 rpsH_gene flipped: 18,67,76,118
1172 rpsH_gene normal: 54
1173 rpsH_gene normal: 25,78
1173 rpsH_gene flipped: 81
1174 rpsH_gene normal: 28,57
1174 rpsH_gene flipped: 29,30
πΈ Sticky five 1166-1170 with 2 candidates
1167 rpsH_gene symmetric: 65,86
π Short stem 1237-1337 - 2-pair stem - open loops: π° Bump-2 1239-1240, πΈ Sticky loop 1297-1300 (4), π Bump-1 1302, π° Bump-2 1335-1336
1237 rpsH_gene normal: 51,71,95,103,104,110
1240 rpsH_gene normal: 25,78
1240 rpsH_gene flipped: 81
1300 rpsH_gene normal: 18,67,76,118
1300 rpsH_gene flipped: 54
1301 rpsH_gene normal: 12,26,55,106
1301 rpsH_gene flipped: 66
1302 rpsH_gene normal: 53,68,123
1336 rpsH_gene flipped: 6,93
1337 rpsH_gene normal: 28,57
1337 rpsH_gene flipped: 29,30
π° Bump-2 1239-1240 with 1 candidates
1239 rpsH_gene normal: 128
πΈ Sticky loop 1297-1300 (4) with 3 candidates
1297 rpsH_gene flipped: 128
1299 rpsH_gene flipped: 62,112
π° Bump-2 1335-1336 with 3 candidates
1335 rpsH_gene normal: 2,74,79
βοΈ Belt 1241-1296 - (7-pair stem - open loops: πΈ Sticky five 1248-1252, πΈ Sticky five 1285-1289)
1241 rpsH_gene normal: 6,93
1242 rpsH_gene symmetric: 80,84,117
1243 rpsH_gene symmetric: 8,20,24,97,116
1244 rpsH_gene normal: 13,15,77,88,114
1244 rpsH_gene flipped: 127
1245 rpsH_gene flipped: 1,3,10,27,96,111
1245 rpsH_gene normal: 72,129
1246 rpsH_gene symmetric: 65,86
1247 rpsH_gene normal: 1,3,10,27,96,111
1247 rpsH_gene flipped: 72,129
1252 rpsH_gene symmetric: 105,107
1289 rpsH_gene flipped: 62,112
1291 rpsH_gene flipped: 35,102,115
1292 rpsH_gene symmetric: 80,84,117
1293 rpsH_gene normal: 35,102,115
1294 rpsH_gene normal: 18,67,76,118
1294 rpsH_gene flipped: 54
1295 rpsH_gene normal: 2,74,79
1296 rpsH_gene normal: 35,102,115
πΈ Sticky five 1248-1252 with 7 candidates
1249 rpsH_gene normal: 51,71,95,103,104,110
1251 rpsH_gene normal: 66
πΈ Sticky five 1285-1289 with 3 candidates
1285 rpsH_gene symmetric: 65,86
1288 rpsH_gene normal: 66
π Short stem 1253-1284 - 3-pair stem - open loops: π° Bump-2 1256-1257, πΈ Sticky loop 1278-1281 (4)
1254 rpsH_gene symmetric: 105,107
1255 rpsH_gene flipped: 66
1257 rpsH_gene flipped: 23,70,119
1281 rpsH_gene flipped: 12,26,55,106
1281 rpsH_gene normal: 66
1282 rpsH_gene symmetric: 91
1284 rpsH_gene flipped: 1,3,10,27,96,111
1284 rpsH_gene normal: 72,129
π° Bump-2 1256-1257 with 1 candidates
1256 rpsH_gene normal: 66
πΈ Sticky loop 1278-1281 (4) with 24 candidates
1278 rpsH_gene normal: 28,57
1278 rpsH_gene flipped: 29,30
1279 rpsH_gene normal: 11,32,40,59,63,83,92,99
1279 rpsH_gene flipped: 25,78
1280 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1280 rpsH_gene normal: 29,30
π Short stem 1258-1277 - 2-pair stem - open loops: π± Sticky-3 1260-1262, π± Sticky-3 1273-1275
1258 rpsH_gene symmetric: 80,84,117
1259 rpsH_gene normal: 23,70,119
1262 rpsH_gene flipped: 12,26,55,106
1262 rpsH_gene normal: 66
1275 rpsH_gene flipped: 23,70,119
1276 rpsH_gene symmetric: 80,84,117
1277 rpsH_gene flipped: 6,93
π± Sticky-3 1260-1262 with 20 candidates
1260 rpsH_gene normal: 11,32,40,59,63,83,92,99
1260 rpsH_gene flipped: 25,78
1261 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1261 rpsH_gene normal: 29,30
π± Sticky-3 1273-1275 with 7 candidates
1273 rpsH_gene normal: 51,71,95,103,104,110
1274 rpsH_gene normal: 66
π Short stem 1263-1272 - 3-pair stem - open loops: πΈ Sticky loop 1266-1269 (4)
1263 rpsH_gene symmetric: 91
1264 rpsH_gene normal: 2,74,79
1265 rpsH_gene symmetric: 8,20,24,97,116
1269 rpsH_gene symmetric: 105,107
1271 rpsH_gene flipped: 23,70,119
1272 rpsH_gene normal: 13,15,77,88,114
1272 rpsH_gene flipped: 127
πΈ Sticky loop 1266-1269 (4) with 6 candidates
1266 rpsH_gene symmetric: 80,84,117
1267 rpsH_gene normal: 23,70,119
π Short stem 1303-1334 - 1-pair stem - open loops: πΈ Sticky loop 1304-1307 (4), πΈ Sticky loop 1330-1333 (4)
1303 rpsH_gene flipped: 6,93
1307 rpsH_gene flipped: 4
1307 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1333 rpsH_gene flipped: 62,112
1334 rpsH_gene normal: 18,67,76,118
1334 rpsH_gene flipped: 54
πΈ Sticky loop 1304-1307 (4) with 4 candidates
1304 rpsH_gene normal: 28,57
1304 rpsH_gene flipped: 29,30
πΈ Sticky loop 1330-1333 (4) with 4 candidates
1330 rpsH_gene normal: 62,112
1331 rpsH_gene flipped: 66
1332 rpsH_gene normal: 66
βοΈ Belt 1308-1329 - (7-pair stem - open loops: πΈ Sticky loop 1315-1322 (8))
1308 rpsH_gene normal: 25,78
1308 rpsH_gene flipped: 81
1309 rpsH_gene normal: 28,57
1309 rpsH_gene flipped: 29,30
1311 rpsH_gene flipped: 62,112
1312 rpsH_gene normal: 18,67,76,118
1312 rpsH_gene flipped: 54
1314 rpsH_gene flipped: 18,67,76,118
1314 rpsH_gene normal: 54
1322 rpsH_gene normal: 23,70,119
1323 rpsH_gene normal: 11,32,40,59,63,83,92,99
1323 rpsH_gene flipped: 25,78
1325 rpsH_gene symmetric: 91
1326 rpsH_gene normal: 12,26,55,106
1326 rpsH_gene flipped: 66
1327 rpsH_gene normal: 17,44,82,98,100,109,120,122
1327 rpsH_gene flipped: 29,30
1328 rpsH_gene flipped: 1,3,10,27,96,111
1328 rpsH_gene normal: 72,129
1329 rpsH_gene normal: 128
πΈ Sticky loop 1315-1322 (8) with 25 candidates
1315 rpsH_gene flipped: 35,102,115
1316 rpsH_gene normal: 13,15,77,88,114
1316 rpsH_gene flipped: 127
1317 rpsH_gene normal: 51,71,95,103,104,110
1318 rpsH_gene flipped: 51,71,95,103,104,110
1320 rpsH_gene symmetric: 91
1321 rpsH_gene normal: 2,74,79
π Short stem 1348-1374 - 1-pair stem - open loops: π Bump-1 1349, π Bump-1 1373
1373 rpsH_gene flipped: 66
βοΈ Belt 1350-1372 - (7-pair stem - open loops: πΈ Sticky loop 1357-1365 (9))
1350 rpsH_gene flipped: 5,9,48,90,113
1351 rpsH_gene normal: 2,74,79
1352 rpsH_gene normal: 35,102,115
1354 rpsH_gene normal: 25,78
1354 rpsH_gene flipped: 81
1355 rpsH_gene normal: 28,57
1355 rpsH_gene flipped: 29,30
1365 rpsH_gene flipped: 53,68,123
1366 rpsH_gene normal: 17,44,82,98,100,109,120,122
1366 rpsH_gene flipped: 29,30
1367 rpsH_gene symmetric: 34,39
1368 rpsH_gene flipped: 13,15,77,88,114
1368 rpsH_gene normal: 127
1369 rpsH_gene flipped: 6,93
1370 rpsH_gene flipped: 25,78
1370 rpsH_gene normal: 81
1372 rpsH_gene normal: 62,112
πΈ Sticky loop 1357-1365 (9) with 22 candidates
1357 rpsH_gene flipped: 5,9,48,90,113
1359 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1359 rpsH_gene normal: 25,78
1360 rpsH_gene symmetric: 105,107
1361 rpsH_gene flipped: 66
1363 rpsH_gene normal: 128
1364 rpsH_gene flipped: 35,102,115
π Short stem 1401-1501 - 1-pair stem - open loops: π° Bump-2 1402-1403, π± Sticky-3 1498-1500
1401 rpsH_gene flipped: 53,68,123
1403 rpsH_gene normal: 53,68,123
1501 rpsH_gene normal: 51,71,95,103,104,110
π± Sticky-3 1498-1500 with 6 candidates
1499 rpsH_gene flipped: 51,71,95,103,104,110
π Short stem 1404-1497 - 2-pair stem - open loops: π Bump-1 1406, π Bump-1 1495
1404 rpsH_gene normal: 35,102,115
1405 rpsH_gene normal: 18,67,76,118
1405 rpsH_gene flipped: 54
1495 rpsH_gene normal: 2,74,79
1496 rpsH_gene normal: 35,102,115
1497 rpsH_gene flipped: 128
π Short stem 1407-1494 - 1-pair stem - open loops: π Bump-1 1408, π° Bump-2 1492-1493
1407 rpsH_gene symmetric: 34,39
1493 rpsH_gene flipped: 62,112
1494 rpsH_gene normal: 18,67,76,118
1494 rpsH_gene flipped: 54
π° Bump-2 1492-1493 with 1 candidates
1492 rpsH_gene normal: 66
π Medium stem 1409-1491 - (4-pair stem - open loops: π Bump-1 1413, π Bump-1 1487
1409 rpsH_gene symmetric: 34,39
1410 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1410 rpsH_gene normal: 29,30
1411 rpsH_gene normal: 17,44,82,98,100,109,120,122
1411 rpsH_gene flipped: 29,30
1412 rpsH_gene flipped: 1,3,10,27,96,111
1412 rpsH_gene normal: 72,129
1413 rpsH_gene normal: 128
1488 rpsH_gene flipped: 25,78
1488 rpsH_gene normal: 81
1490 rpsH_gene normal: 62,112
1491 rpsH_gene flipped: 66
π Short stem 1414-1486 - 3-pair stem - open loops: π° Bump-2 1417-1418, π° Bump-2 1482-1483
1414 rpsH_gene normal: 25,78
1414 rpsH_gene flipped: 81
1416 rpsH_gene normal: 28,57
1416 rpsH_gene flipped: 29,30
1418 rpsH_gene flipped: 62,112
1484 rpsH_gene flipped: 18,67,76,118
1484 rpsH_gene normal: 54
1485 rpsH_gene normal: 25,78
1485 rpsH_gene flipped: 81
π° Bump-2 1482-1483 with 10 candidates
1482 rpsH_gene normal: 11,32,40,59,63,83,92,99
1482 rpsH_gene flipped: 25,78
βοΈ Belt 1419-1481 - (12-pair stem - open loops: πΈ Sticky loop 1431-1434 (4), π± Sticky-3 1467-1469)
1420 rpsH_gene normal: 25,78
1420 rpsH_gene flipped: 81
1422 rpsH_gene flipped: 25,78
1422 rpsH_gene normal: 81
1423 rpsH_gene normal: 4
1423 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1424 rpsH_gene flipped: 4
1424 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1425 rpsH_gene flipped: 35,102,115
1426 rpsH_gene normal: 13,15,77,88,114
1426 rpsH_gene flipped: 127
1427 rpsH_gene normal: 51,71,95,103,104,110
1430 rpsH_gene normal: 66
1434 rpsH_gene flipped: 62,112
1464 rpsH_gene normal: 1,3,10,27,96,111
1464 rpsH_gene flipped: 72,129
1465 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1465 rpsH_gene normal: 29,30
1466 rpsH_gene normal: 17,44,82,98,100,109,120,122
1466 rpsH_gene flipped: 29,30
1469 rpsH_gene flipped: 28,31,41,56,57,64
1471 rpsH_gene flipped: 4
1471 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1472 rpsH_gene symmetric: 105,107
1474 rpsH_gene normal: 62,112
1477 rpsH_gene normal: 28,31,41,56,57,64
1479 rpsH_gene flipped: 1,3,10,27,96,111
1479 rpsH_gene normal: 72,129
1480 rpsH_gene normal: 128
1481 rpsH_gene normal: 62,112
πΈ Sticky loop 1431-1434 (4) with 4 candidates
1431 rpsH_gene symmetric: 105,107
1432 rpsH_gene flipped: 66
1433 rpsH_gene normal: 66
π± Sticky-3 1467-1469 with 2 candidates
1467 rpsH_gene symmetric: 34,39
π Medium stem 1435-1462 - (6-pair stem - open loops: π Bump-1 1441
1435 rpsH_gene flipped: 128
1437 rpsH_gene flipped: 28,57
1437 rpsH_gene normal: 29,30
1438 rpsH_gene flipped: 25,78
1438 rpsH_gene normal: 81
1439 rpsH_gene flipped: 128
1441 rpsH_gene flipped: 23,70,119
π Medium stem 1442-1466 - (4-pair stem - open loops: π° Bump-2 1446-1447, π Bump-1 1456
1442 rpsH_gene flipped: 2,74,79
1443 rpsH_gene flipped: 28,31,41,56,57,64
1447 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1447 rpsH_gene normal: 29,30
1456 rpsH_gene flipped: 28,57
1456 rpsH_gene normal: 29,30
1458 rpsH_gene normal: 6,93
1459 rpsH_gene symmetric: 80,84,117
1460 rpsH_gene symmetric: 8,20,24,97,116
1461 rpsH_gene flipped: 2,74,79
1462 rpsH_gene flipped: 28,31,41,56,57,64
π° Bump-2 1446-1447 with 6 candidates
1446 rpsH_gene flipped: 51,71,95,103,104,110
π Short stem 1448-1455 - 2-pair stem - open loops: πΈ Sticky loop 1450-1453 (4)
1448 rpsH_gene flipped: 12,26,55,106
1448 rpsH_gene normal: 66
1449 rpsH_gene flipped: 28,31,41,56,57,64
1454 rpsH_gene normal: 28,57
1454 rpsH_gene flipped: 29,30
πΈ Sticky loop 1450-1453 (4) with 11 candidates
1450 rpsH_gene normal: 28,31,41,56,57,64
1451 rpsH_gene normal: 2,74,79
1452 rpsH_gene flipped: 6,93
βοΈ Belt 1506-1529 - (10-pair stem - open loops: πΈ Sticky loop 1516-1519 (4))
1507 rpsH_gene flipped: 51,71,95,103,104,110
1508 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1508 rpsH_gene normal: 29,30
1509 rpsH_gene normal: 53,68,123
1510 rpsH_gene normal: 35,102,115
1511 rpsH_gene flipped: 128
1513 rpsH_gene flipped: 28,57
1513 rpsH_gene normal: 29,30
1519 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1519 rpsH_gene normal: 29,30
1520 rpsH_gene flipped: 12,26,55,106
1520 rpsH_gene normal: 66
1521 rpsH_gene flipped: 18,67,76,118
1521 rpsH_gene normal: 54
1522 rpsH_gene flipped: 35,102,115
1523 rpsH_gene symmetric: 80,84,117
1524 rpsH_gene flipped: 6,93
1525 rpsH_gene flipped: 25,78
1525 rpsH_gene normal: 81
1526 rpsH_gene normal: 4
1526 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1527 rpsH_gene flipped: 4
1527 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1528 rpsH_gene normal: 25,78
1528 rpsH_gene flipped: 81
1529 rpsH_gene normal: 28,57
1529 rpsH_gene flipped: 29,30
πΈ Sticky loop 1516-1519 (4) with 11 candidates
1516 rpsH_gene normal: 28,57
1516 rpsH_gene flipped: 29,30
1517 rpsH_gene flipped: 66
1518 rpsH_gene flipped: 51,71,95,103,104,110
============================================================
π JOURNEY SUMMARY:
π Bridge structures (stem pairs): 105
π Terminal stations (loops): 204
ποΈ Longest bridge: 12 base pairs
π Largest terminal: 13 nucleotides
π― POTENTIAL BINDING HOTSPOTS:
π Look for terminals >10 nt (protein landing zones)
π Check bulges 1-3 nt (fine-tuning sites)
π Monitor bridge intersections (assembly checkpoints)
𧬠RNA rrlB_gene (2933 nucleotides)
============================================================
π The RNA landscape...
πΈ Sticky loop 1-9 (9), π Sticky hub 2914-2933 (20)
βοΈ Belt 10-2913 - (8-pair stem - open loops: πΈ Sticky loop 18-23 (6), πΈ Sticky loop 535-541 (7), π° Bump-2 570-571, πΈ Sticky five 2029-2033, π° Bump-2 2052-2053, πΈ Sticky loop 2637-2640 (4), π° Bump-2 2800-2801, πΈ Sticky five 2817-2821, πΈ Sticky five 2901-2905)
11 rpsH_gene normal: 5,9,48,90,113
13 rpsH_gene normal: 66
14 rpsH_gene flipped: 23,70,119
15 rpsH_gene symmetric: 80,84,117
16 rpsH_gene normal: 35,102,115
17 rpsH_gene flipped: 128
23 rpsH_gene flipped: 25,78
23 rpsH_gene normal: 81
541 rpsH_gene flipped: 13,15,77,88,114
541 rpsH_gene normal: 127
2021 rpsH_gene symmetric: 91
2022 rpsH_gene normal: 2,74,79
2023 rpsH_gene symmetric: 8,20,24,97,116
2024 rpsH_gene flipped: 2,74,79
2025 rpsH_gene flipped: 18,67,76,118
2025 rpsH_gene normal: 54
2026 rpsH_gene symmetric: 105,107
2028 rpsH_gene normal: 62,112
2033 rpsH_gene normal: 128
2053 rpsH_gene normal: 11,32,40,59,63,83,92,99
2053 rpsH_gene flipped: 25,78
2634 rpsH_gene flipped: 51,71,95,103,104,110
2636 rpsH_gene flipped: 18,67,76,118
2636 rpsH_gene normal: 54
2821 rpsH_gene symmetric: 105,107
πΈ Sticky loop 18-23 (6) with 18 candidates
18 rpsH_gene normal: 1,3,10,27,96,111
18 rpsH_gene flipped: 72,129
20 rpsH_gene symmetric: 34,39
21 rpsH_gene flipped: 13,15,77,88,114
21 rpsH_gene normal: 127
22 rpsH_gene flipped: 6,93
πΈ Sticky loop 535-541 (7) with 15 candidates
536 rpsH_gene normal: 28,57
536 rpsH_gene flipped: 29,30
538 rpsH_gene flipped: 23,70,119
539 rpsH_gene normal: 13,15,77,88,114
539 rpsH_gene flipped: 127
540 rpsH_gene symmetric: 34,39
π° Bump-2 570-571 with 1 candidates
570 rpsH_gene flipped: 128
πΈ Sticky five 2029-2033 with 4 candidates
2029 rpsH_gene flipped: 66
2030 rpsH_gene normal: 66
2031 rpsH_gene symmetric: 105,107
π° Bump-2 2052-2053 with 2 candidates
2052 rpsH_gene symmetric: 105,107
πΈ Sticky loop 2637-2640 (4) with 6 candidates
2637 rpsH_gene normal: 62,112
2639 rpsH_gene flipped: 28,57
2639 rpsH_gene normal: 29,30
π° Bump-2 2800-2801 with 4 candidates
2800 rpsH_gene flipped: 28,57
2800 rpsH_gene normal: 29,30
πΈ Sticky five 2817-2821 with 14 candidates
2817 rpsH_gene flipped: 4
2817 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2818 rpsH_gene normal: 62,112
2819 rpsH_gene flipped: 66
2820 rpsH_gene normal: 66
πΈ Sticky five 2901-2905 with 11 candidates
2901 rpsH_gene flipped: 12,26,55,106
2901 rpsH_gene normal: 66
2902 rpsH_gene flipped: 28,31,41,56,57,64
βοΈ Belt 24-534 - (10-pair stem - open loops: πΈ Sticky loop 34-37 (4), πΈ Sticky loop 521-524 (4))
25 rpsH_gene normal: 25,78
25 rpsH_gene flipped: 81
26 rpsH_gene normal: 28,57
26 rpsH_gene flipped: 29,30
28 rpsH_gene normal: 128
29 rpsH_gene flipped: 35,102,115
30 rpsH_gene flipped: 53,68,123
32 rpsH_gene flipped: 12,26,55,106
32 rpsH_gene normal: 66
33 rpsH_gene flipped: 18,67,76,118
33 rpsH_gene normal: 54
37 rpsH_gene flipped: 11,32,40,59,63,83,92,99
37 rpsH_gene normal: 25,78
524 rpsH_gene flipped: 128
525 rpsH_gene normal: 1,3,10,27,96,111
525 rpsH_gene flipped: 72,129
527 rpsH_gene normal: 51,71,95,103,104,110
528 rpsH_gene normal: 66
529 rpsH_gene flipped: 23,70,119
530 rpsH_gene normal: 13,15,77,88,114
530 rpsH_gene flipped: 127
531 rpsH_gene flipped: 11,32,40,59,63,83,92,99
531 rpsH_gene normal: 25,78
532 rpsH_gene flipped: 62,112
534 rpsH_gene normal: 25,78
534 rpsH_gene flipped: 81
πΈ Sticky loop 34-37 (4) with 11 candidates
34 rpsH_gene normal: 25,78
34 rpsH_gene flipped: 81
35 rpsH_gene normal: 6,93
36 rpsH_gene normal: 13,15,77,88,114
36 rpsH_gene flipped: 127
πΈ Sticky loop 521-524 (4) with 17 candidates
521 rpsH_gene normal: 1,3,10,27,96,111
521 rpsH_gene flipped: 72,129
522 rpsH_gene flipped: 13,15,77,88,114
522 rpsH_gene normal: 127
523 rpsH_gene normal: 35,102,115
π Medium stem 38-520 - (4-pair stem - open loops: π° Bump-2 42-43, π Sticky hub 455-469 (15), πΈ Sticky loop 478-481 (4), πΈ Sticky loop 484-492 (9), π Sticky hub 506-518 (13)
38 rpsH_gene flipped: 62,112
39 rpsH_gene normal: 18,67,76,118
39 rpsH_gene flipped: 54
41 rpsH_gene flipped: 11,32,40,59,63,83,92,99
41 rpsH_gene normal: 25,78
469 rpsH_gene flipped: 66
481 rpsH_gene flipped: 66
482 rpsH_gene flipped: 51,71,95,103,104,110
483 rpsH_gene flipped: 17,44,82,98,100,109,120,122
483 rpsH_gene normal: 29,30
492 rpsH_gene flipped: 28,57
492 rpsH_gene normal: 29,30
519 rpsH_gene symmetric: 105,107
520 rpsH_gene flipped: 128
π° Bump-2 42-43 with 2 candidates
42 rpsH_gene symmetric: 105,107
π Sticky hub 455-469 (15) with 57 candidates
455 rpsH_gene normal: 17,44,82,98,100,109,120,122
455 rpsH_gene flipped: 29,30
456 rpsH_gene flipped: 11,32,40,59,63,83,92,99
456 rpsH_gene normal: 25,78
457 rpsH_gene flipped: 62,112
458 rpsH_gene flipped: 128
459 rpsH_gene normal: 1,3,10,27,96,111
459 rpsH_gene flipped: 72,129
460 rpsH_gene flipped: 17,44,82,98,100,109,120,122
460 rpsH_gene normal: 29,30
461 rpsH_gene normal: 53,68,123
462 rpsH_gene normal: 35,102,115
464 rpsH_gene normal: 62,112
466 rpsH_gene flipped: 28,57
466 rpsH_gene normal: 29,30
468 rpsH_gene normal: 28,57
468 rpsH_gene flipped: 29,30
πΈ Sticky loop 478-481 (4) with 3 candidates
479 rpsH_gene normal: 66
480 rpsH_gene symmetric: 105,107
πΈ Sticky loop 484-492 (9) with 13 candidates
486 rpsH_gene normal: 53,68,123
487 rpsH_gene flipped: 6,93
488 rpsH_gene normal: 6,93
489 rpsH_gene symmetric: 80,84,117
490 rpsH_gene normal: 23,70,119
π Sticky hub 506-518 (13) with 52 candidates
506 rpsH_gene flipped: 66
507 rpsH_gene flipped: 51,71,95,103,104,110
508 rpsH_gene flipped: 17,44,82,98,100,109,120,122
508 rpsH_gene normal: 29,30
509 rpsH_gene flipped: 12,26,55,106
509 rpsH_gene normal: 66
510 rpsH_gene flipped: 18,67,76,118
510 rpsH_gene normal: 54
511 rpsH_gene normal: 62,112
512 rpsH_gene flipped: 66
514 rpsH_gene flipped: 51,71,95,103,104,110
515 rpsH_gene flipped: 17,44,82,98,100,109,120,122
515 rpsH_gene normal: 29,30
516 rpsH_gene normal: 53,68,123
517 rpsH_gene normal: 35,102,115
βοΈ Belt 44-454 - (11-pair stem - open loops: πΈ Sticky loop 55-61 (7), π± Sticky-3 127-129, π Bump-1 158, πΈ Sticky loop 186-191 (6), πΈ Sticky loop 224-232 (9), π± Sticky-3 241-243, π° Bump-2 272-273, πΈ Sticky five 437-441, π Bump-1 444, π Bump-1 452)
44 rpsH_gene flipped: 28,57
44 rpsH_gene normal: 29,30
45 rpsH_gene normal: 6,93
46 rpsH_gene symmetric: 80,84,117
47 rpsH_gene normal: 23,70,119
49 rpsH_gene normal: 128
50 rpsH_gene normal: 62,112
51 rpsH_gene flipped: 66
52 rpsH_gene normal: 66
53 rpsH_gene flipped: 28,57
53 rpsH_gene normal: 29,30
54 rpsH_gene normal: 28,57
54 rpsH_gene flipped: 29,30
61 rpsH_gene normal: 5,9,48,90,113
129 rpsH_gene normal: 17,44,82,98,100,109,120,122
129 rpsH_gene flipped: 29,30
158 rpsH_gene normal: 62,112
273 rpsH_gene flipped: 53,68,123
441 rpsH_gene normal: 62,112
442 rpsH_gene normal: 11,32,40,59,63,83,92,99
442 rpsH_gene flipped: 25,78
443 rpsH_gene flipped: 17,44,82,98,100,109,120,122
443 rpsH_gene normal: 29,30
444 rpsH_gene normal: 53,68,123
445 rpsH_gene normal: 23,70,119
447 rpsH_gene symmetric: 65,86
449 rpsH_gene flipped: 62,112
451 rpsH_gene normal: 62,112
452 rpsH_gene flipped: 66
453 rpsH_gene flipped: 51,71,95,103,104,110
454 rpsH_gene flipped: 17,44,82,98,100,109,120,122
454 rpsH_gene normal: 29,30
πΈ Sticky loop 55-61 (7) with 25 candidates
55 rpsH_gene normal: 11,32,40,59,63,83,92,99
55 rpsH_gene flipped: 25,78
56 rpsH_gene flipped: 13,15,77,88,114
56 rpsH_gene normal: 127
57 rpsH_gene normal: 35,102,115
59 rpsH_gene flipped: 35,102,115
60 rpsH_gene flipped: 2,74,79
π± Sticky-3 127-129 with 10 candidates
127 rpsH_gene flipped: 17,44,82,98,100,109,120,122
127 rpsH_gene normal: 29,30
πΈ Sticky loop 186-191 (6) with 11 candidates
188 rpsH_gene normal: 28,57
188 rpsH_gene flipped: 29,30
189 rpsH_gene flipped: 66
190 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 224-232 (9) with 30 candidates
225 rpsH_gene normal: 51,71,95,103,104,110
226 rpsH_gene flipped: 51,71,95,103,104,110
227 rpsH_gene flipped: 17,44,82,98,100,109,120,122
227 rpsH_gene normal: 29,30
228 rpsH_gene normal: 53,68,123
229 rpsH_gene normal: 23,70,119
231 rpsH_gene symmetric: 105,107
π± Sticky-3 241-243 with 3 candidates
241 rpsH_gene flipped: 62,112
242 rpsH_gene flipped: 128
π° Bump-2 272-273 with 3 candidates
272 rpsH_gene flipped: 23,70,119
πΈ Sticky five 437-441 with 17 candidates
437 rpsH_gene normal: 62,112
438 rpsH_gene normal: 11,32,40,59,63,83,92,99
438 rpsH_gene flipped: 25,78
440 rpsH_gene flipped: 18,67,76,118
440 rpsH_gene normal: 54
βοΈ Belt 62-126 - (8-pair stem - open loops: πΈ Sticky loop 70-75 (6), πΈ Sticky five 80-84, π± Sticky-3 120-122)
64 rpsH_gene flipped: 5,9,48,90,113
66 rpsH_gene flipped: 18,67,76,118
66 rpsH_gene normal: 54
67 rpsH_gene flipped: 35,102,115
68 rpsH_gene symmetric: 80,84,117
69 rpsH_gene normal: 23,70,119
75 rpsH_gene symmetric: 80,84,117
76 rpsH_gene normal: 35,102,115
77 rpsH_gene normal: 18,67,76,118
77 rpsH_gene flipped: 54
78 rpsH_gene normal: 2,74,79
79 rpsH_gene flipped: 6,93
84 rpsH_gene flipped: 28,57
84 rpsH_gene normal: 29,30
123 rpsH_gene normal: 28,57
123 rpsH_gene flipped: 29,30
124 rpsH_gene flipped: 66
126 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 70-75 (6) with 6 candidates
71 rpsH_gene symmetric: 65,86
73 rpsH_gene normal: 66
74 rpsH_gene flipped: 23,70,119
πΈ Sticky five 80-84 with 5 candidates
80 rpsH_gene flipped: 25,78
80 rpsH_gene normal: 81
81 rpsH_gene flipped: 128
83 rpsH_gene normal: 66
π± Sticky-3 120-122 with 3 candidates
120 rpsH_gene normal: 25,78
120 rpsH_gene flipped: 81
βοΈ Belt 85-119 - (7-pair stem - open loops: π° Bump-2 92-93, πΈ Sticky loop 107-112 (6))
85 rpsH_gene flipped: 25,78
85 rpsH_gene normal: 81
87 rpsH_gene normal: 62,112
89 rpsH_gene symmetric: 65,86
91 rpsH_gene normal: 128
93 rpsH_gene flipped: 66
113 rpsH_gene normal: 28,31,41,56,57,64
114 rpsH_gene normal: 12,26,55,106
114 rpsH_gene flipped: 66
115 rpsH_gene normal: 53,68,123
116 rpsH_gene normal: 23,70,119
117 rpsH_gene flipped: 66
119 rpsH_gene normal: 128
π° Bump-2 92-93 with 2 candidates
92 rpsH_gene normal: 62,112
πΈ Sticky loop 107-112 (6) with 8 candidates
107 rpsH_gene normal: 6,93
108 rpsH_gene symmetric: 80,84,117
109 rpsH_gene normal: 23,70,119
π Short stem 94-106 - 3-pair stem - open loops: πΈ Sticky loop 97-103 (7)
94 rpsH_gene flipped: 51,71,95,103,104,110
95 rpsH_gene flipped: 17,44,82,98,100,109,120,122
95 rpsH_gene normal: 29,30
96 rpsH_gene normal: 53,68,123
103 rpsH_gene flipped: 51,71,95,103,104,110
104 rpsH_gene flipped: 17,44,82,98,100,109,120,122
104 rpsH_gene normal: 29,30
105 rpsH_gene normal: 53,68,123
106 rpsH_gene flipped: 6,93
πΈ Sticky loop 97-103 (7) with 15 candidates
97 rpsH_gene normal: 35,102,115
98 rpsH_gene normal: 4
98 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
101 rpsH_gene symmetric: 65,86
π Short stem 130-139 - 3-pair stem - open loops: πΈ Sticky loop 133-136 (4)
130 rpsH_gene flipped: 11,32,40,59,63,83,92,99
130 rpsH_gene normal: 25,78
131 rpsH_gene flipped: 62,112
136 rpsH_gene normal: 4
136 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
138 rpsH_gene normal: 28,31,41,56,57,64
139 rpsH_gene normal: 2,74,79
πΈ Sticky loop 133-136 (4) with 4 candidates
133 rpsH_gene symmetric: 105,107
135 rpsH_gene symmetric: 105,107
βοΈ Belt 140-157 - (7-pair stem - open loops: πΈ Sticky loop 147-150 (4))
140 rpsH_gene normal: 23,70,119
141 rpsH_gene normal: 11,32,40,59,63,83,92,99
141 rpsH_gene flipped: 25,78
143 rpsH_gene symmetric: 34,39
145 rpsH_gene symmetric: 34,39
151 rpsH_gene flipped: 1,3,10,27,96,111
151 rpsH_gene normal: 72,129
155 rpsH_gene flipped: 51,71,95,103,104,110
157 rpsH_gene flipped: 18,67,76,118
157 rpsH_gene normal: 54
πΈ Sticky loop 147-150 (4) with 10 candidates
147 rpsH_gene normal: 5,9,48,90,113
149 rpsH_gene flipped: 5,9,48,90,113
βοΈ Belt 159-185 - (9-pair stem - open loops: πΈ Sticky loop 168-176 (9))
159 rpsH_gene flipped: 66
161 rpsH_gene flipped: 5,9,48,90,113
162 rpsH_gene normal: 12,26,55,106
162 rpsH_gene flipped: 66
163 rpsH_gene normal: 17,44,82,98,100,109,120,122
163 rpsH_gene flipped: 29,30
164 rpsH_gene flipped: 1,3,10,27,96,111
164 rpsH_gene normal: 72,129
165 rpsH_gene symmetric: 65,86
167 rpsH_gene flipped: 28,57
167 rpsH_gene normal: 29,30
176 rpsH_gene flipped: 28,57
176 rpsH_gene normal: 29,30
177 rpsH_gene normal: 6,93
178 rpsH_gene symmetric: 80,84,117
179 rpsH_gene normal: 23,70,119
180 rpsH_gene flipped: 66
181 rpsH_gene flipped: 51,71,95,103,104,110
182 rpsH_gene flipped: 17,44,82,98,100,109,120,122
182 rpsH_gene normal: 29,30
183 rpsH_gene normal: 53,68,123
184 rpsH_gene flipped: 6,93
πΈ Sticky loop 168-176 (9) with 16 candidates
168 rpsH_gene flipped: 25,78
168 rpsH_gene normal: 81
169 rpsH_gene normal: 4
169 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
173 rpsH_gene normal: 128
174 rpsH_gene normal: 62,112
π Medium stem 192-223 - (6-pair stem - open loops: π° Bump-2 198-199, π Bump-1 216, π Bump-1 222
192 rpsH_gene flipped: 18,67,76,118
192 rpsH_gene normal: 54
193 rpsH_gene normal: 62,112
194 rpsH_gene flipped: 66
196 rpsH_gene flipped: 51,71,95,103,104,110
199 rpsH_gene flipped: 5,9,48,90,113
218 rpsH_gene normal: 66
219 rpsH_gene symmetric: 105,107
220 rpsH_gene flipped: 66
223 rpsH_gene flipped: 5,9,48,90,113
π° Bump-2 198-199 with 8 candidates
198 rpsH_gene flipped: 1,3,10,27,96,111
198 rpsH_gene normal: 72,129
π Medium stem 200-215 - (5-pair stem - open loops: πΈ Sticky loop 205-208 (4), π° Bump-2 211-212
201 rpsH_gene normal: 5,9,48,90,113
203 rpsH_gene normal: 66
204 rpsH_gene flipped: 62,112
210 rpsH_gene normal: 53,68,123
213 rpsH_gene flipped: 28,57
213 rpsH_gene normal: 29,30
214 rpsH_gene normal: 28,57
214 rpsH_gene flipped: 29,30
215 rpsH_gene flipped: 66
πΈ Sticky loop 205-208 (4) with 19 candidates
205 rpsH_gene flipped: 128
206 rpsH_gene normal: 1,3,10,27,96,111
206 rpsH_gene flipped: 72,129
207 rpsH_gene flipped: 17,44,82,98,100,109,120,122
207 rpsH_gene normal: 29,30
π° Bump-2 211-212 with 3 candidates
211 rpsH_gene normal: 23,70,119
π Short stem 233-240 - 2-pair stem - open loops: πΈ Sticky loop 235-238 (4)
234 rpsH_gene normal: 28,31,41,56,57,64
239 rpsH_gene normal: 17,44,82,98,100,109,120,122
239 rpsH_gene flipped: 29,30
240 rpsH_gene flipped: 11,32,40,59,63,83,92,99
240 rpsH_gene normal: 25,78
πΈ Sticky loop 235-238 (4) with 5 candidates
235 rpsH_gene normal: 12,26,55,106
235 rpsH_gene flipped: 66
π Medium stem 244-271 - (5-pair stem - open loops: πΈ Sticky five 249-253, πΈ Sticky loop 263-266 (4)
244 rpsH_gene flipped: 23,70,119
245 rpsH_gene symmetric: 80,84,117
246 rpsH_gene flipped: 6,93
247 rpsH_gene normal: 6,93
248 rpsH_gene symmetric: 80,84,117
253 rpsH_gene normal: 23,70,119
266 rpsH_gene flipped: 53,68,123
268 rpsH_gene normal: 17,44,82,98,100,109,120,122
268 rpsH_gene flipped: 29,30
269 rpsH_gene flipped: 11,32,40,59,63,83,92,99
269 rpsH_gene normal: 25,78
270 rpsH_gene symmetric: 105,107
πΈ Sticky five 249-253 with 9 candidates
249 rpsH_gene normal: 23,70,119
251 rpsH_gene flipped: 23,70,119
252 rpsH_gene symmetric: 80,84,117
πΈ Sticky loop 263-266 (4) with 19 candidates
263 rpsH_gene normal: 13,15,77,88,114
263 rpsH_gene flipped: 127
264 rpsH_gene flipped: 11,32,40,59,63,83,92,99
264 rpsH_gene normal: 25,78
265 rpsH_gene flipped: 23,70,119
π Short stem 254-262 - 2-pair stem - open loops: πΈ Sticky five 256-260
254 rpsH_gene flipped: 66
255 rpsH_gene flipped: 51,71,95,103,104,110
260 rpsH_gene normal: 28,57
260 rpsH_gene flipped: 29,30
262 rpsH_gene flipped: 23,70,119
πΈ Sticky five 256-260 with 8 candidates
256 rpsH_gene flipped: 13,15,77,88,114
256 rpsH_gene normal: 127
257 rpsH_gene flipped: 6,93
π Medium stem 274-436 - (4-pair stem - open loops: π° Bump-2 278-279, πΈ Sticky loop 376-383 (8), πΈ Sticky loop 409-414 (6), π° Bump-2 431-432
274 rpsH_gene flipped: 12,26,55,106
274 rpsH_gene normal: 66
275 rpsH_gene flipped: 18,67,76,118
275 rpsH_gene normal: 54
276 rpsH_gene normal: 62,112
277 rpsH_gene flipped: 66
279 rpsH_gene flipped: 5,9,48,90,113
383 rpsH_gene symmetric: 34,39
414 rpsH_gene flipped: 1,3,10,27,96,111
414 rpsH_gene normal: 72,129
433 rpsH_gene symmetric: 91
434 rpsH_gene normal: 12,26,55,106
434 rpsH_gene flipped: 66
435 rpsH_gene flipped: 12,26,55,106
435 rpsH_gene normal: 66
436 rpsH_gene flipped: 18,67,76,118
436 rpsH_gene normal: 54
πΈ Sticky loop 376-383 (8) with 21 candidates
376 rpsH_gene normal: 6,93
377 rpsH_gene symmetric: 80,84,117
378 rpsH_gene flipped: 6,93
380 rpsH_gene normal: 28,57
380 rpsH_gene flipped: 29,30
381 rpsH_gene normal: 11,32,40,59,63,83,92,99
381 rpsH_gene flipped: 25,78
πΈ Sticky loop 409-414 (6) with 34 candidates
410 rpsH_gene normal: 28,57
410 rpsH_gene flipped: 29,30
411 rpsH_gene normal: 11,32,40,59,63,83,92,99
411 rpsH_gene flipped: 25,78
412 rpsH_gene flipped: 17,44,82,98,100,109,120,122
412 rpsH_gene normal: 29,30
413 rpsH_gene normal: 17,44,82,98,100,109,120,122
413 rpsH_gene flipped: 29,30
π° Bump-2 431-432 with 8 candidates
431 rpsH_gene normal: 1,3,10,27,96,111
431 rpsH_gene flipped: 72,129
π Medium stem 280-375 - (4-pair stem - open loops: πΈ Sticky loop 284-289 (6), π± Sticky-3 369-371
281 rpsH_gene flipped: 11,32,40,59,63,83,92,99
281 rpsH_gene normal: 25,78
282 rpsH_gene flipped: 62,112
371 rpsH_gene flipped: 62,112
372 rpsH_gene flipped: 128
374 rpsH_gene flipped: 28,57
374 rpsH_gene normal: 29,30
πΈ Sticky loop 284-289 (6) with 6 candidates
284 rpsH_gene symmetric: 105,107
286 rpsH_gene symmetric: 105,107
288 rpsH_gene symmetric: 105,107
π± Sticky-3 369-371 with 2 candidates
369 rpsH_gene normal: 62,112
βοΈ Belt 290-368 - (13-pair stem - open loops: π Bump-1 303, π± Sticky-3 353-355)
290 rpsH_gene symmetric: 105,107
291 rpsH_gene normal: 4
291 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
294 rpsH_gene flipped: 62,112
296 rpsH_gene normal: 25,78
296 rpsH_gene flipped: 81
297 rpsH_gene normal: 28,57
297 rpsH_gene flipped: 29,30
298 rpsH_gene flipped: 66
299 rpsH_gene normal: 66
300 rpsH_gene flipped: 23,70,119
301 rpsH_gene symmetric: 80,84,117
302 rpsH_gene normal: 35,102,115
303 rpsH_gene normal: 18,67,76,118
303 rpsH_gene flipped: 54
355 rpsH_gene flipped: 35,102,115
356 rpsH_gene flipped: 2,74,79
357 rpsH_gene flipped: 18,67,76,118
357 rpsH_gene normal: 54
358 rpsH_gene symmetric: 105,107
360 rpsH_gene normal: 62,112
362 rpsH_gene flipped: 23,70,119
363 rpsH_gene flipped: 2,74,79
364 rpsH_gene symmetric: 91
365 rpsH_gene normal: 2,74,79
366 rpsH_gene normal: 23,70,119
368 rpsH_gene normal: 128
π± Sticky-3 353-355 with 9 candidates
353 rpsH_gene flipped: 1,3,10,27,96,111
353 rpsH_gene normal: 72,129
354 rpsH_gene normal: 128
π Short stem 304-352 - 3-pair stem - open loops: π± Sticky-3 307-309, πΈ Sticky loop 326-333 (8), π± Sticky-3 347-349
305 rpsH_gene flipped: 18,67,76,118
305 rpsH_gene normal: 54
306 rpsH_gene normal: 25,78
306 rpsH_gene flipped: 81
333 rpsH_gene flipped: 53,68,123
349 rpsH_gene flipped: 35,102,115
350 rpsH_gene normal: 13,15,77,88,114
350 rpsH_gene flipped: 127
351 rpsH_gene symmetric: 34,39
π± Sticky-3 307-309 with 5 candidates
307 rpsH_gene normal: 28,57
307 rpsH_gene flipped: 29,30
308 rpsH_gene flipped: 66
πΈ Sticky loop 326-333 (8) with 28 candidates
326 rpsH_gene flipped: 25,78
326 rpsH_gene normal: 81
328 rpsH_gene normal: 62,112
329 rpsH_gene normal: 11,32,40,59,63,83,92,99
329 rpsH_gene flipped: 25,78
331 rpsH_gene flipped: 11,32,40,59,63,83,92,99
331 rpsH_gene normal: 25,78
332 rpsH_gene flipped: 23,70,119
π± Sticky-3 347-349 with 1 candidates
348 rpsH_gene normal: 128
π Medium stem 310-325 - (5-pair stem - open loops: πΈ Sticky loop 315-320 (6)
310 rpsH_gene normal: 66
311 rpsH_gene flipped: 28,57
311 rpsH_gene normal: 29,30
312 rpsH_gene normal: 6,93
313 rpsH_gene symmetric: 80,84,117
314 rpsH_gene symmetric: 8,20,24,97,116
320 rpsH_gene symmetric: 65,86
321 rpsH_gene normal: 1,3,10,27,96,111
321 rpsH_gene flipped: 72,129
323 rpsH_gene flipped: 11,32,40,59,63,83,92,99
323 rpsH_gene normal: 25,78
324 rpsH_gene flipped: 28,57
324 rpsH_gene normal: 29,30
πΈ Sticky loop 315-320 (6) with 14 candidates
315 rpsH_gene symmetric: 80,84,117
316 rpsH_gene symmetric: 8,20,24,97,116
317 rpsH_gene symmetric: 80,84,117
318 rpsH_gene normal: 23,70,119
π Short stem 334-346 - 3-pair stem - open loops: πΈ Sticky loop 337-343 (7)
336 rpsH_gene normal: 53,68,123
343 rpsH_gene normal: 51,71,95,103,104,110
πΈ Sticky loop 337-343 (7) with 14 candidates
337 rpsH_gene normal: 35,102,115
338 rpsH_gene flipped: 128
339 rpsH_gene normal: 1,3,10,27,96,111
339 rpsH_gene flipped: 72,129
341 rpsH_gene symmetric: 34,39
βοΈ Belt 384-408 - (9-pair stem - open loops: πΈ Sticky loop 393-399 (7))
384 rpsH_gene flipped: 13,15,77,88,114
384 rpsH_gene normal: 127
385 rpsH_gene normal: 35,102,115
387 rpsH_gene normal: 25,78
387 rpsH_gene flipped: 81
388 rpsH_gene flipped: 25,78
388 rpsH_gene normal: 81
389 rpsH_gene flipped: 128
391 rpsH_gene flipped: 5,9,48,90,113
392 rpsH_gene normal: 12,26,55,106
392 rpsH_gene flipped: 66
399 rpsH_gene normal: 62,112
400 rpsH_gene flipped: 66
402 rpsH_gene symmetric: 65,86
404 rpsH_gene normal: 128
405 rpsH_gene normal: 25,78
405 rpsH_gene flipped: 81
πΈ Sticky loop 393-399 (7) with 22 candidates
393 rpsH_gene flipped: 12,26,55,106
393 rpsH_gene normal: 66
394 rpsH_gene flipped: 18,67,76,118
394 rpsH_gene normal: 54
395 rpsH_gene symmetric: 105,107
396 rpsH_gene normal: 18,67,76,118
396 rpsH_gene flipped: 54
398 rpsH_gene flipped: 18,67,76,118
398 rpsH_gene normal: 54
π Medium stem 415-430 - (6-pair stem - open loops: πΈ Sticky loop 421-424 (4)
415 rpsH_gene flipped: 5,9,48,90,113
416 rpsH_gene normal: 12,26,55,106
416 rpsH_gene flipped: 66
417 rpsH_gene flipped: 12,26,55,106
417 rpsH_gene normal: 66
418 rpsH_gene symmetric: 91
419 rpsH_gene normal: 12,26,55,106
419 rpsH_gene flipped: 66
420 rpsH_gene normal: 17,44,82,98,100,109,120,122
420 rpsH_gene flipped: 29,30
424 rpsH_gene normal: 6,93
425 rpsH_gene flipped: 2,74,79
426 rpsH_gene normal: 5,9,48,90,113
430 rpsH_gene symmetric: 65,86
πΈ Sticky loop 421-424 (4) with 11 candidates
421 rpsH_gene normal: 51,71,95,103,104,110
422 rpsH_gene normal: 66
423 rpsH_gene flipped: 28,57
423 rpsH_gene normal: 29,30
π Short stem 470-477 - 2-pair stem - open loops: πΈ Sticky loop 472-475 (4)
471 rpsH_gene normal: 66
475 rpsH_gene normal: 23,70,119
476 rpsH_gene flipped: 66
πΈ Sticky loop 472-475 (4) with 9 candidates
472 rpsH_gene flipped: 28,57
472 rpsH_gene normal: 29,30
473 rpsH_gene normal: 6,93
474 rpsH_gene symmetric: 80,84,117
π Medium stem 493-505 - (4-pair stem - open loops: πΈ Sticky five 497-501
495 rpsH_gene normal: 28,57
495 rpsH_gene flipped: 29,30
504 rpsH_gene normal: 66
505 rpsH_gene symmetric: 105,107
πΈ Sticky five 497-501 with 5 candidates
497 rpsH_gene flipped: 62,112
499 rpsH_gene normal: 62,112
500 rpsH_gene flipped: 66
βοΈ Belt 542-569 - (12-pair stem - open loops: πΈ Sticky loop 554-557 (4))
542 rpsH_gene symmetric: 8,20,24,97,116
543 rpsH_gene flipped: 2,74,79
544 rpsH_gene flipped: 28,31,41,56,57,64
547 rpsH_gene flipped: 28,57
547 rpsH_gene normal: 29,30
548 rpsH_gene normal: 6,93
549 rpsH_gene symmetric: 80,84,117
550 rpsH_gene normal: 35,102,115
552 rpsH_gene symmetric: 105,107
557 rpsH_gene flipped: 18,67,76,118
557 rpsH_gene normal: 54
558 rpsH_gene flipped: 35,102,115
559 rpsH_gene symmetric: 80,84,117
560 rpsH_gene normal: 35,102,115
561 rpsH_gene flipped: 128
562 rpsH_gene normal: 1,3,10,27,96,111
562 rpsH_gene flipped: 72,129
563 rpsH_gene flipped: 17,44,82,98,100,109,120,122
563 rpsH_gene normal: 29,30
564 rpsH_gene flipped: 12,26,55,106
564 rpsH_gene normal: 66
565 rpsH_gene flipped: 28,31,41,56,57,64
568 rpsH_gene flipped: 4
568 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
569 rpsH_gene symmetric: 105,107
πΈ Sticky loop 554-557 (4) with 12 candidates
554 rpsH_gene normal: 62,112
555 rpsH_gene normal: 11,32,40,59,63,83,92,99
555 rpsH_gene flipped: 25,78
π Medium stem 572-587 - (4-pair stem - open loops: πΈ Sticky loop 576-583 (8)
572 rpsH_gene symmetric: 65,86
575 rpsH_gene normal: 128
583 rpsH_gene symmetric: 80,84,117
584 rpsH_gene normal: 23,70,119
585 rpsH_gene normal: 11,32,40,59,63,83,92,99
585 rpsH_gene flipped: 25,78
587 rpsH_gene flipped: 28,31,41,56,57,64
πΈ Sticky loop 576-583 (8) with 24 candidates
576 rpsH_gene normal: 25,78
576 rpsH_gene flipped: 81
578 rpsH_gene flipped: 25,78
578 rpsH_gene normal: 81
579 rpsH_gene normal: 18,67,76,118
579 rpsH_gene flipped: 54
581 rpsH_gene flipped: 11,32,40,59,63,83,92,99
581 rpsH_gene normal: 25,78
582 rpsH_gene flipped: 23,70,119
π Medium stem 588-1270 - (6-pair stem - open loops: πΈ Sticky loop 594-597 (4), π° Bump-2 678-679, π° Bump-2 819-820, π° Bump-2 1205-1206, πΈ Sticky loop 1257-1264 (8)
590 rpsH_gene symmetric: 65,86
593 rpsH_gene normal: 28,31,41,56,57,64
597 rpsH_gene flipped: 128
679 rpsH_gene normal: 53,68,123
820 rpsH_gene normal: 66
1206 rpsH_gene flipped: 53,68,123
1254 rpsH_gene normal: 128
1255 rpsH_gene flipped: 35,102,115
1256 rpsH_gene flipped: 2,74,79
1264 rpsH_gene normal: 66
1265 rpsH_gene flipped: 62,112
1266 rpsH_gene flipped: 128
1268 rpsH_gene flipped: 51,71,95,103,104,110
1269 rpsH_gene flipped: 13,15,77,88,114
1269 rpsH_gene normal: 127
1270 rpsH_gene normal: 23,70,119
πΈ Sticky loop 594-597 (4) with 7 candidates
595 rpsH_gene flipped: 18,67,76,118
595 rpsH_gene normal: 54
596 rpsH_gene symmetric: 105,107
π° Bump-2 1205-1206 with 3 candidates
1205 rpsH_gene flipped: 23,70,119
πΈ Sticky loop 1257-1264 (8) with 27 candidates
1257 rpsH_gene flipped: 18,67,76,118
1257 rpsH_gene normal: 54
1258 rpsH_gene normal: 62,112
1259 rpsH_gene normal: 11,32,40,59,63,83,92,99
1259 rpsH_gene flipped: 25,78
1261 rpsH_gene flipped: 1,3,10,27,96,111
1261 rpsH_gene normal: 72,129
1262 rpsH_gene symmetric: 65,86
βοΈ Belt 598-677 - (13-pair stem - open loops: π° Bump-2 611-612, π± Sticky-3 634-636, π Bump-1 645, πΈ Sticky loop 661-664 (4))
599 rpsH_gene flipped: 23,70,119
600 rpsH_gene normal: 13,15,77,88,114
600 rpsH_gene flipped: 127
601 rpsH_gene normal: 51,71,95,103,104,110
602 rpsH_gene normal: 66
603 rpsH_gene flipped: 28,57
603 rpsH_gene normal: 29,30
604 rpsH_gene flipped: 25,78
604 rpsH_gene normal: 81
605 rpsH_gene normal: 4
605 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
608 rpsH_gene flipped: 51,71,95,103,104,110
609 rpsH_gene flipped: 17,44,82,98,100,109,120,122
609 rpsH_gene normal: 29,30
610 rpsH_gene normal: 53,68,123
612 rpsH_gene flipped: 66
645 rpsH_gene flipped: 18,67,76,118
645 rpsH_gene normal: 54
664 rpsH_gene flipped: 128
666 rpsH_gene symmetric: 65,86
668 rpsH_gene symmetric: 105,107
669 rpsH_gene normal: 11,32,40,59,63,83,92,99
669 rpsH_gene flipped: 25,78
670 rpsH_gene flipped: 17,44,82,98,100,109,120,122
670 rpsH_gene normal: 29,30
672 rpsH_gene normal: 53,68,123
673 rpsH_gene normal: 23,70,119
674 rpsH_gene flipped: 66
676 rpsH_gene flipped: 51,71,95,103,104,110
677 rpsH_gene flipped: 17,44,82,98,100,109,120,122
677 rpsH_gene normal: 29,30
π° Bump-2 611-612 with 3 candidates
611 rpsH_gene normal: 23,70,119
π± Sticky-3 634-636 with 6 candidates
634 rpsH_gene normal: 53,68,123
635 rpsH_gene normal: 23,70,119
πΈ Sticky loop 661-664 (4) with 7 candidates
661 rpsH_gene flipped: 28,57
661 rpsH_gene normal: 29,30
663 rpsH_gene flipped: 25,78
663 rpsH_gene normal: 81
π Medium stem 613-633 - (4-pair stem - open loops: π° Bump-2 617-618, π° Bump-2 628-629
614 rpsH_gene symmetric: 65,86
616 rpsH_gene flipped: 28,57
616 rpsH_gene normal: 29,30
629 rpsH_gene normal: 28,57
629 rpsH_gene flipped: 29,30
630 rpsH_gene flipped: 66
632 rpsH_gene flipped: 51,71,95,103,104,110
633 rpsH_gene flipped: 17,44,82,98,100,109,120,122
633 rpsH_gene normal: 29,30
π Short stem 619-627 - 2-pair stem - open loops: πΈ Sticky five 621-625
619 rpsH_gene normal: 28,57
619 rpsH_gene flipped: 29,30
625 rpsH_gene flipped: 66
626 rpsH_gene normal: 66
627 rpsH_gene flipped: 28,57
627 rpsH_gene normal: 29,30
πΈ Sticky five 621-625 with 12 candidates
621 rpsH_gene flipped: 23,70,119
622 rpsH_gene flipped: 53,68,123
623 rpsH_gene normal: 53,68,123
624 rpsH_gene normal: 23,70,119
π Short stem 637-644 - 2-pair stem - open loops: πΈ Sticky loop 639-642 (4)
637 rpsH_gene flipped: 62,112
638 rpsH_gene normal: 18,67,76,118
638 rpsH_gene flipped: 54
643 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 639-642 (4) with 6 candidates
640 rpsH_gene flipped: 28,31,41,56,57,64
π Medium stem 646-660 - (5-pair stem - open loops: πΈ Sticky five 651-655
646 rpsH_gene normal: 25,78
646 rpsH_gene flipped: 81
648 rpsH_gene normal: 6,93
649 rpsH_gene symmetric: 80,84,117
650 rpsH_gene normal: 35,102,115
655 rpsH_gene flipped: 62,112
656 rpsH_gene normal: 4
656 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
657 rpsH_gene flipped: 4
657 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
658 rpsH_gene flipped: 35,102,115
659 rpsH_gene normal: 13,15,77,88,114
659 rpsH_gene flipped: 127
660 rpsH_gene flipped: 11,32,40,59,63,83,92,99
660 rpsH_gene normal: 25,78
πΈ Sticky five 651-655 with 11 candidates
651 rpsH_gene normal: 4
651 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
654 rpsH_gene normal: 66
π Short stem 680-818 - 2-pair stem - open loops: πΈ Sticky five 682-686, πΈ Sticky loop 809-816 (8)
680 rpsH_gene flipped: 6,93
681 rpsH_gene flipped: 25,78
681 rpsH_gene normal: 81
816 rpsH_gene normal: 53,68,123
817 rpsH_gene normal: 23,70,119
818 rpsH_gene flipped: 66
πΈ Sticky five 682-686 with 7 candidates
683 rpsH_gene normal: 62,112
685 rpsH_gene flipped: 5,9,48,90,113
πΈ Sticky loop 809-816 (8) with 22 candidates
809 rpsH_gene normal: 4
809 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
810 rpsH_gene normal: 28,31,41,56,57,64
812 rpsH_gene symmetric: 91
813 rpsH_gene normal: 12,26,55,106
813 rpsH_gene flipped: 66
π Medium stem 687-808 - (6-pair stem - open loops: π± Sticky-3 693-695, π Bump-1 785, πΈ Sticky loop 797-802 (6)
687 rpsH_gene normal: 5,9,48,90,113
689 rpsH_gene flipped: 23,70,119
690 rpsH_gene flipped: 53,68,123
691 rpsH_gene normal: 17,44,82,98,100,109,120,122
691 rpsH_gene flipped: 29,30
692 rpsH_gene flipped: 1,3,10,27,96,111
692 rpsH_gene normal: 72,129
785 rpsH_gene flipped: 53,68,123
802 rpsH_gene symmetric: 65,86
804 rpsH_gene flipped: 23,70,119
805 rpsH_gene flipped: 2,74,79
806 rpsH_gene flipped: 18,67,76,118
806 rpsH_gene normal: 54
807 rpsH_gene normal: 25,78
807 rpsH_gene flipped: 81
808 rpsH_gene flipped: 25,78
808 rpsH_gene normal: 81
π± Sticky-3 693-695 with 4 candidates
693 rpsH_gene normal: 128
694 rpsH_gene normal: 25,78
694 rpsH_gene flipped: 81
πΈ Sticky loop 797-802 (6) with 6 candidates
798 rpsH_gene normal: 28,57
798 rpsH_gene flipped: 29,30
800 rpsH_gene symmetric: 105,107
βοΈ Belt 696-784 - (12-pair stem - open loops: π Bump-1 708, π± Sticky-3 742-744, π° Bump-2 770-771, π Bump-1 773)
696 rpsH_gene normal: 6,93
697 rpsH_gene normal: 13,15,77,88,114
697 rpsH_gene flipped: 127
698 rpsH_gene flipped: 11,32,40,59,63,83,92,99
698 rpsH_gene normal: 25,78
699 rpsH_gene flipped: 28,57
699 rpsH_gene normal: 29,30
700 rpsH_gene flipped: 25,78
700 rpsH_gene normal: 81
701 rpsH_gene normal: 4
701 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
702 rpsH_gene flipped: 4
702 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
703 rpsH_gene normal: 62,112
704 rpsH_gene flipped: 66
705 rpsH_gene normal: 66
706 rpsH_gene flipped: 28,57
706 rpsH_gene normal: 29,30
707 rpsH_gene flipped: 25,78
707 rpsH_gene normal: 81
708 rpsH_gene normal: 4
708 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
744 rpsH_gene symmetric: 105,107
765 rpsH_gene flipped: 28,31,41,56,57,64
766 rpsH_gene flipped: 4
766 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
767 rpsH_gene symmetric: 105,107
769 rpsH_gene normal: 25,78
769 rpsH_gene flipped: 81
771 rpsH_gene flipped: 2,74,79
772 rpsH_gene flipped: 18,67,76,118
772 rpsH_gene normal: 54
773 rpsH_gene normal: 25,78
773 rpsH_gene flipped: 81
777 rpsH_gene flipped: 25,78
777 rpsH_gene normal: 81
779 rpsH_gene normal: 62,112
780 rpsH_gene flipped: 66
782 rpsH_gene normal: 66
783 rpsH_gene flipped: 28,57
783 rpsH_gene normal: 29,30
784 rpsH_gene normal: 6,93
π± Sticky-3 742-744 with 1 candidates
743 rpsH_gene normal: 128
π° Bump-2 770-771 with 2 candidates
770 rpsH_gene normal: 6,93
π Medium stem 709-741 - (4-pair stem - open loops: π± Sticky-3 713-715, πΈ Sticky loop 734-737 (4)
709 rpsH_gene flipped: 4
709 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
710 rpsH_gene normal: 25,78
710 rpsH_gene flipped: 81
712 rpsH_gene flipped: 25,78
712 rpsH_gene normal: 81
715 rpsH_gene flipped: 51,71,95,103,104,110
737 rpsH_gene normal: 23,70,119
738 rpsH_gene normal: 11,32,40,59,63,83,92,99
738 rpsH_gene flipped: 25,78
740 rpsH_gene normal: 5,9,48,90,113
π± Sticky-3 713-715 with 1 candidates
713 rpsH_gene flipped: 128
πΈ Sticky loop 734-737 (4) with 19 candidates
734 rpsH_gene flipped: 51,71,95,103,104,110
735 rpsH_gene flipped: 17,44,82,98,100,109,120,122
735 rpsH_gene normal: 29,30
736 rpsH_gene normal: 53,68,123
βοΈ Belt 716-733 - (7-pair stem - open loops: πΈ Sticky loop 723-726 (4))
717 rpsH_gene symmetric: 34,39
719 rpsH_gene normal: 5,9,48,90,113
721 rpsH_gene flipped: 51,71,95,103,104,110
727 rpsH_gene flipped: 28,57
727 rpsH_gene normal: 29,30
728 rpsH_gene normal: 28,57
728 rpsH_gene flipped: 29,30
729 rpsH_gene normal: 11,32,40,59,63,83,92,99
729 rpsH_gene flipped: 25,78
730 rpsH_gene flipped: 17,44,82,98,100,109,120,122
730 rpsH_gene normal: 29,30
731 rpsH_gene normal: 53,68,123
732 rpsH_gene normal: 23,70,119
733 rpsH_gene flipped: 66
πΈ Sticky loop 723-726 (4) with 12 candidates
723 rpsH_gene flipped: 18,67,76,118
723 rpsH_gene normal: 54
724 rpsH_gene normal: 25,78
724 rpsH_gene flipped: 81
725 rpsH_gene normal: 28,57
725 rpsH_gene flipped: 29,30
π Short stem 745-764 - 3-pair stem - open loops: π Bump-1 748
745 rpsH_gene normal: 4
745 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
746 rpsH_gene flipped: 4
746 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
747 rpsH_gene normal: 62,112
748 rpsH_gene flipped: 66
π Medium stem 749-769 - (5-pair stem - open loops: πΈ Sticky loop 754-761 (8)
761 rpsH_gene normal: 128
762 rpsH_gene normal: 62,112
763 rpsH_gene normal: 11,32,40,59,63,83,92,99
763 rpsH_gene flipped: 25,78
πΈ Sticky loop 754-761 (8) with 12 candidates
756 rpsH_gene flipped: 23,70,119
757 rpsH_gene symmetric: 80,84,117
758 rpsH_gene flipped: 6,93
759 rpsH_gene normal: 28,57
759 rpsH_gene flipped: 29,30
π Short stem 786-796 - 3-pair stem - open loops: πΈ Sticky five 789-793
786 rpsH_gene normal: 17,44,82,98,100,109,120,122
786 rpsH_gene flipped: 29,30
787 rpsH_gene normal: 51,71,95,103,104,110
793 rpsH_gene flipped: 51,71,95,103,104,110
794 rpsH_gene flipped: 17,44,82,98,100,109,120,122
794 rpsH_gene normal: 29,30
795 rpsH_gene normal: 53,68,123
796 rpsH_gene flipped: 6,93
πΈ Sticky five 789-793 with 11 candidates
789 rpsH_gene flipped: 5,9,48,90,113
791 rpsH_gene normal: 51,71,95,103,104,110
π Medium stem 821-1204 - (6-pair stem - open loops: πΈ Sticky loop 827-830 (4), π° Bump-2 845-846, πΈ Sticky five 950-954, πΈ Sticky loop 981-984 (4), π± Sticky-3 997-999, πΈ Sticky loop 1195-1198 (4)
821 rpsH_gene flipped: 23,70,119
822 rpsH_gene flipped: 2,74,79
823 rpsH_gene normal: 5,9,48,90,113
830 rpsH_gene flipped: 25,78
830 rpsH_gene normal: 81
846 rpsH_gene normal: 28,31,41,56,57,64
984 rpsH_gene flipped: 17,44,82,98,100,109,120,122
984 rpsH_gene normal: 29,30
1170 rpsH_gene symmetric: 8,20,24,97,116
1171 rpsH_gene flipped: 2,74,79
1172 rpsH_gene flipped: 28,31,41,56,57,64
1198 rpsH_gene normal: 28,31,41,56,57,64
1200 rpsH_gene flipped: 18,67,76,118
1200 rpsH_gene normal: 54
1201 rpsH_gene symmetric: 105,107
1202 rpsH_gene flipped: 128
1204 rpsH_gene normal: 66
πΈ Sticky loop 827-830 (4) with 4 candidates
829 rpsH_gene flipped: 28,57
829 rpsH_gene normal: 29,30
πΈ Sticky five 950-954 with 8 candidates
950 rpsH_gene symmetric: 80,84,117
951 rpsH_gene flipped: 6,93
953 rpsH_gene flipped: 25,78
953 rpsH_gene normal: 81
πΈ Sticky loop 981-984 (4) with 12 candidates
982 rpsH_gene normal: 51,71,95,103,104,110
983 rpsH_gene flipped: 51,71,95,103,104,110
π± Sticky-3 997-999 with 8 candidates
997 rpsH_gene flipped: 2,74,79
998 rpsH_gene normal: 5,9,48,90,113
πΈ Sticky loop 1195-1198 (4) with 16 candidates
1195 rpsH_gene symmetric: 80,84,117
1196 rpsH_gene normal: 35,102,115
1197 rpsH_gene normal: 4
1197 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
π Medium stem 831-844 - (5-pair stem - open loops: πΈ Sticky loop 836-839 (4)
831 rpsH_gene flipped: 128
833 rpsH_gene flipped: 23,70,119
834 rpsH_gene symmetric: 80,84,117
835 rpsH_gene symmetric: 8,20,24,97,116
839 rpsH_gene normal: 2,74,79
840 rpsH_gene normal: 35,102,115
842 rpsH_gene normal: 62,112
843 rpsH_gene flipped: 66
πΈ Sticky loop 836-839 (4) with 9 candidates
836 rpsH_gene flipped: 53,68,123
837 rpsH_gene flipped: 12,26,55,106
837 rpsH_gene normal: 66
838 rpsH_gene symmetric: 91
βοΈ Belt 847-949 - (7-pair stem - open loops: π± Sticky-3 854-856, π± Sticky-3 940-942)
848 rpsH_gene flipped: 1,3,10,27,96,111
848 rpsH_gene normal: 72,129
849 rpsH_gene flipped: 5,9,48,90,113
851 rpsH_gene symmetric: 91
852 rpsH_gene normal: 12,26,55,106
852 rpsH_gene flipped: 66
853 rpsH_gene normal: 53,68,123
942 rpsH_gene normal: 11,32,40,59,63,83,92,99
942 rpsH_gene flipped: 25,78
944 rpsH_gene symmetric: 34,39
946 rpsH_gene symmetric: 34,39
947 rpsH_gene flipped: 13,15,77,88,114
947 rpsH_gene normal: 127
948 rpsH_gene flipped: 6,93
949 rpsH_gene normal: 6,93
π± Sticky-3 854-856 with 2 candidates
854 rpsH_gene flipped: 6,93
π± Sticky-3 940-942 with 2 candidates
941 rpsH_gene symmetric: 105,107
βοΈ Belt 857-939 - (17-pair stem - open loops: π± Sticky-3 874-876, π° Bump-2 919-920, π Bump-1 923, π Bump-1 936)
858 rpsH_gene flipped: 25,78
858 rpsH_gene normal: 81
859 rpsH_gene flipped: 128
861 rpsH_gene symmetric: 105,107
863 rpsH_gene flipped: 23,70,119
864 rpsH_gene normal: 13,15,77,88,114
864 rpsH_gene flipped: 127
865 rpsH_gene symmetric: 34,39
867 rpsH_gene flipped: 18,67,76,118
867 rpsH_gene normal: 54
868 rpsH_gene symmetric: 105,107
869 rpsH_gene normal: 4
869 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
871 rpsH_gene normal: 28,31,41,56,57,64
872 rpsH_gene normal: 2,74,79
873 rpsH_gene flipped: 6,93
876 rpsH_gene normal: 51,71,95,103,104,110
920 rpsH_gene flipped: 17,44,82,98,100,109,120,122
920 rpsH_gene normal: 29,30
921 rpsH_gene normal: 53,68,123
922 rpsH_gene flipped: 6,93
923 rpsH_gene normal: 28,57
923 rpsH_gene flipped: 29,30
925 rpsH_gene symmetric: 105,107
926 rpsH_gene flipped: 66
928 rpsH_gene normal: 128
929 rpsH_gene symmetric: 105,107
930 rpsH_gene normal: 4
930 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
933 rpsH_gene flipped: 5,9,48,90,113
935 rpsH_gene symmetric: 34,39
936 rpsH_gene flipped: 13,15,77,88,114
936 rpsH_gene normal: 127
937 rpsH_gene flipped: 6,93
939 rpsH_gene normal: 28,57
939 rpsH_gene flipped: 29,30
π± Sticky-3 874-876 with 8 candidates
874 rpsH_gene normal: 6,93
875 rpsH_gene normal: 13,15,77,88,114
875 rpsH_gene flipped: 127
π° Bump-2 919-920 with 8 candidates
919 rpsH_gene normal: 1,3,10,27,96,111
919 rpsH_gene flipped: 72,129
βοΈ Belt 877-918 - (8-pair stem - open loops: π± Sticky-3 885-887, π± Sticky-3 908-910)
877 rpsH_gene normal: 66
878 rpsH_gene flipped: 28,57
878 rpsH_gene normal: 29,30
882 rpsH_gene flipped: 25,78
882 rpsH_gene normal: 81
883 rpsH_gene normal: 18,67,76,118
883 rpsH_gene flipped: 54
887 rpsH_gene normal: 12,26,55,106
887 rpsH_gene flipped: 66
910 rpsH_gene flipped: 51,71,95,103,104,110
912 rpsH_gene flipped: 18,67,76,118
912 rpsH_gene normal: 54
913 rpsH_gene flipped: 35,102,115
914 rpsH_gene symmetric: 80,84,117
915 rpsH_gene normal: 23,70,119
916 rpsH_gene flipped: 66
918 rpsH_gene symmetric: 65,86
π± Sticky-3 885-887 with 13 candidates
885 rpsH_gene flipped: 1,3,10,27,96,111
885 rpsH_gene normal: 72,129
886 rpsH_gene flipped: 5,9,48,90,113
π± Sticky-3 908-910 with 6 candidates
908 rpsH_gene normal: 51,71,95,103,104,110
βοΈ Belt 888-907 - (7-pair stem - open loops: πΈ Sticky five 895-899, π Bump-1 905)
889 rpsH_gene normal: 53,68,123
890 rpsH_gene normal: 23,70,119
891 rpsH_gene normal: 11,32,40,59,63,83,92,99
891 rpsH_gene flipped: 25,78
893 rpsH_gene flipped: 28,31,41,56,57,64
899 rpsH_gene flipped: 51,71,95,103,104,110
900 rpsH_gene flipped: 17,44,82,98,100,109,120,122
900 rpsH_gene normal: 29,30
902 rpsH_gene normal: 53,68,123
903 rpsH_gene normal: 23,70,119
905 rpsH_gene normal: 128
906 rpsH_gene flipped: 35,102,115
907 rpsH_gene normal: 13,15,77,88,114
907 rpsH_gene flipped: 127
πΈ Sticky five 895-899 with 34 candidates
895 rpsH_gene normal: 1,3,10,27,96,111
895 rpsH_gene flipped: 72,129
896 rpsH_gene flipped: 17,44,82,98,100,109,120,122
896 rpsH_gene normal: 29,30
897 rpsH_gene normal: 17,44,82,98,100,109,120,122
897 rpsH_gene flipped: 29,30
898 rpsH_gene normal: 51,71,95,103,104,110
βοΈ Belt 955-980 - (10-pair stem - open loops: πΈ Sticky loop 965-970 (6))
955 rpsH_gene flipped: 35,102,115
956 rpsH_gene flipped: 2,74,79
957 rpsH_gene normal: 5,9,48,90,113
959 rpsH_gene flipped: 51,71,95,103,104,110
960 rpsH_gene flipped: 13,15,77,88,114
960 rpsH_gene normal: 127
961 rpsH_gene normal: 35,102,115
962 rpsH_gene normal: 18,67,76,118
962 rpsH_gene flipped: 54
963 rpsH_gene normal: 12,26,55,106
963 rpsH_gene flipped: 66
964 rpsH_gene normal: 53,68,123
970 rpsH_gene normal: 62,112
971 rpsH_gene flipped: 66
972 rpsH_gene normal: 66
973 rpsH_gene symmetric: 105,107
975 rpsH_gene flipped: 28,57
975 rpsH_gene normal: 29,30
977 rpsH_gene normal: 28,57
977 rpsH_gene flipped: 29,30
978 rpsH_gene flipped: 66
980 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 965-970 (6) with 14 candidates
965 rpsH_gene normal: 35,102,115
966 rpsH_gene normal: 18,67,76,118
966 rpsH_gene flipped: 54
967 rpsH_gene normal: 2,74,79
968 rpsH_gene normal: 35,102,115
π Short stem 985-996 - 3-pair stem - open loops: πΈ Sticky loop 988-993 (6)
986 rpsH_gene normal: 17,44,82,98,100,109,120,122
986 rpsH_gene flipped: 29,30
987 rpsH_gene flipped: 11,32,40,59,63,83,92,99
987 rpsH_gene normal: 25,78
993 rpsH_gene flipped: 53,68,123
994 rpsH_gene normal: 17,44,82,98,100,109,120,122
994 rpsH_gene flipped: 29,30
995 rpsH_gene flipped: 11,32,40,59,63,83,92,99
995 rpsH_gene normal: 25,78
996 rpsH_gene flipped: 23,70,119
πΈ Sticky loop 988-993 (6) with 30 candidates
988 rpsH_gene symmetric: 105,107
989 rpsH_gene normal: 11,32,40,59,63,83,92,99
989 rpsH_gene flipped: 25,78
990 rpsH_gene flipped: 17,44,82,98,100,109,120,122
990 rpsH_gene normal: 29,30
991 rpsH_gene normal: 53,68,123
992 rpsH_gene symmetric: 8,20,24,97,116
π Medium stem 1000-1169 - (4-pair stem - open loops: π Bump-1 1004
1000 rpsH_gene normal: 66
1001 rpsH_gene flipped: 28,57
1001 rpsH_gene normal: 29,30
1002 rpsH_gene flipped: 25,78
1002 rpsH_gene normal: 81
1003 rpsH_gene normal: 18,67,76,118
1003 rpsH_gene flipped: 54
1004 rpsH_gene normal: 12,26,55,106
1004 rpsH_gene flipped: 66
π Short stem 1005-1172 - 3-pair stem - open loops: π° Bump-2 1008-1009, π° Bump-2 1164-1165
1006 rpsH_gene normal: 17,44,82,98,100,109,120,122
1006 rpsH_gene flipped: 29,30
1007 rpsH_gene normal: 51,71,95,103,104,110
1009 rpsH_gene normal: 66
1157 rpsH_gene flipped: 2,74,79
1158 rpsH_gene flipped: 18,67,76,118
1158 rpsH_gene normal: 54
1159 rpsH_gene flipped: 35,102,115
1160 rpsH_gene symmetric: 80,84,117
1161 rpsH_gene flipped: 6,93
1162 rpsH_gene normal: 6,93
1163 rpsH_gene normal: 13,15,77,88,114
1163 rpsH_gene flipped: 127
1165 rpsH_gene flipped: 23,70,119
1166 rpsH_gene symmetric: 80,84,117
1167 rpsH_gene normal: 23,70,119
1168 rpsH_gene normal: 11,32,40,59,63,83,92,99
1168 rpsH_gene flipped: 25,78
1169 rpsH_gene flipped: 13,15,77,88,114
1169 rpsH_gene normal: 127
π° Bump-2 1164-1165 with 10 candidates
1164 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1164 rpsH_gene normal: 25,78
π Medium stem 1010-1156 - (4-pair stem - open loops: πΈ Sticky loop 1014-1019 (6)
1010 rpsH_gene flipped: 62,112
1011 rpsH_gene normal: 18,67,76,118
1011 rpsH_gene flipped: 54
1013 rpsH_gene flipped: 1,3,10,27,96,111
1013 rpsH_gene normal: 72,129
πΈ Sticky loop 1014-1019 (6) with 17 candidates
1014 rpsH_gene normal: 128
1015 rpsH_gene normal: 25,78
1015 rpsH_gene flipped: 81
1016 rpsH_gene flipped: 25,78
1016 rpsH_gene normal: 81
1017 rpsH_gene normal: 4
1017 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
π Short stem 1020-1157 - 1-pair stem - open loops: π Bump-1 1021
1020 rpsH_gene normal: 66
1021 rpsH_gene flipped: 62,112
π Medium stem 1022-1163 - (6-pair stem - open loops: π Sticky hub 1028-1038 (11), π Sticky hub 1134-1152 (19)
1023 rpsH_gene normal: 25,78
1023 rpsH_gene flipped: 81
1025 rpsH_gene normal: 28,57
1025 rpsH_gene flipped: 29,30
1026 rpsH_gene flipped: 66
1038 rpsH_gene flipped: 66
1124 rpsH_gene normal: 28,57
1124 rpsH_gene flipped: 29,30
1125 rpsH_gene flipped: 66
1126 rpsH_gene normal: 66
1127 rpsH_gene symmetric: 105,107
1129 rpsH_gene normal: 128
1130 rpsH_gene symmetric: 105,107
1131 rpsH_gene flipped: 128
1133 rpsH_gene flipped: 51,71,95,103,104,110
1152 rpsH_gene normal: 53,68,123
1153 rpsH_gene normal: 23,70,119
1154 rpsH_gene flipped: 66
1155 rpsH_gene normal: 66
1156 rpsH_gene flipped: 23,70,119
π Sticky hub 1028-1038 (11) with 25 candidates
1028 rpsH_gene flipped: 51,71,95,103,104,110
1029 rpsH_gene flipped: 13,15,77,88,114
1029 rpsH_gene normal: 127
1030 rpsH_gene normal: 23,70,119
1032 rpsH_gene normal: 128
1033 rpsH_gene symmetric: 105,107
1035 rpsH_gene normal: 25,78
1035 rpsH_gene flipped: 81
1037 rpsH_gene normal: 28,57
1037 rpsH_gene flipped: 29,30
π Sticky hub 1134-1152 (19) with 74 candidates
1134 rpsH_gene flipped: 13,15,77,88,114
1134 rpsH_gene normal: 127
1135 rpsH_gene flipped: 6,93
1138 rpsH_gene normal: 6,93
1139 rpsH_gene flipped: 2,74,79
1140 rpsH_gene normal: 5,9,48,90,113
1143 rpsH_gene flipped: 51,71,95,103,104,110
1144 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1144 rpsH_gene normal: 29,30
1145 rpsH_gene normal: 17,44,82,98,100,109,120,122
1145 rpsH_gene flipped: 29,30
1146 rpsH_gene flipped: 1,3,10,27,96,111
1146 rpsH_gene normal: 72,129
1147 rpsH_gene normal: 128
1148 rpsH_gene flipped: 35,102,115
1149 rpsH_gene normal: 13,15,77,88,114
1149 rpsH_gene flipped: 127
1150 rpsH_gene symmetric: 34,39
1151 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1151 rpsH_gene normal: 29,30
π Short stem 1039-1123 - 3-pair stem - open loops: π Bump-1 1042
1039 rpsH_gene normal: 66
1040 rpsH_gene flipped: 28,57
1040 rpsH_gene normal: 29,30
1041 rpsH_gene normal: 6,93
1042 rpsH_gene flipped: 53,68,123
βοΈ Belt 1043-1133 - (10-pair stem - open loops: πΈ Sticky loop 1053-1059 (7), π± Sticky-3 1118-1120)
1044 rpsH_gene normal: 17,44,82,98,100,109,120,122
1044 rpsH_gene flipped: 29,30
1045 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1045 rpsH_gene normal: 25,78
1046 rpsH_gene symmetric: 105,107
1047 rpsH_gene normal: 11,32,40,59,63,83,92,99
1047 rpsH_gene flipped: 25,78
1049 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1049 rpsH_gene normal: 25,78
1050 rpsH_gene flipped: 23,70,119
1051 rpsH_gene flipped: 53,68,123
1052 rpsH_gene normal: 17,44,82,98,100,109,120,122
1052 rpsH_gene flipped: 29,30
1059 rpsH_gene normal: 4
1059 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1120 rpsH_gene symmetric: 80,84,117
1121 rpsH_gene symmetric: 8,20,24,97,116
1122 rpsH_gene symmetric: 80,84,117
1123 rpsH_gene flipped: 6,93
πΈ Sticky loop 1053-1059 (7) with 21 candidates
1053 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1053 rpsH_gene normal: 25,78
1054 rpsH_gene flipped: 28,57
1054 rpsH_gene normal: 29,30
1055 rpsH_gene normal: 28,57
1055 rpsH_gene flipped: 29,30
1057 rpsH_gene normal: 128
1058 rpsH_gene symmetric: 105,107
π± Sticky-3 1118-1120 with 8 candidates
1118 rpsH_gene flipped: 18,67,76,118
1118 rpsH_gene normal: 54
1119 rpsH_gene flipped: 35,102,115
π Medium stem 1060-1117 - (5-pair stem - open loops: π Bump-1 1065, πΈ Sticky five 1091-1095, π Bump-1 1112
1060 rpsH_gene flipped: 4
1060 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1061 rpsH_gene normal: 25,78
1061 rpsH_gene flipped: 81
1062 rpsH_gene normal: 6,93
1063 rpsH_gene flipped: 2,74,79
1064 rpsH_gene flipped: 28,31,41,56,57,64
1112 rpsH_gene normal: 18,67,76,118
1112 rpsH_gene flipped: 54
1113 rpsH_gene normal: 2,74,79
1114 rpsH_gene flipped: 6,93
1115 rpsH_gene normal: 6,93
1116 rpsH_gene flipped: 53,68,123
1117 rpsH_gene flipped: 12,26,55,106
1117 rpsH_gene normal: 66
πΈ Sticky five 1091-1095 with 7 candidates
1091 rpsH_gene symmetric: 80,84,117
1092 rpsH_gene normal: 35,102,115
1093 rpsH_gene flipped: 128
βοΈ Belt 1066-1090 - (8-pair stem - open loops: πΈ Sticky loop 1074-1082 (9))
1067 rpsH_gene symmetric: 105,107
1068 rpsH_gene flipped: 66
1069 rpsH_gene normal: 66
1070 rpsH_gene flipped: 23,70,119
1071 rpsH_gene normal: 13,15,77,88,114
1071 rpsH_gene flipped: 127
1072 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1072 rpsH_gene normal: 25,78
1073 rpsH_gene flipped: 23,70,119
1085 rpsH_gene normal: 66
1086 rpsH_gene symmetric: 105,107
1087 rpsH_gene flipped: 66
1089 rpsH_gene normal: 66
1090 rpsH_gene flipped: 23,70,119
πΈ Sticky loop 1074-1082 (9) with 34 candidates
1074 rpsH_gene flipped: 53,68,123
1075 rpsH_gene normal: 17,44,82,98,100,109,120,122
1075 rpsH_gene flipped: 29,30
1076 rpsH_gene flipped: 1,3,10,27,96,111
1076 rpsH_gene normal: 72,129
1077 rpsH_gene flipped: 5,9,48,90,113
1079 rpsH_gene flipped: 1,3,10,27,96,111
1079 rpsH_gene normal: 72,129
π Short stem 1096-1111 - 1-pair stem - open loops: π± Sticky-3 1097-1099, π Bump-1 1110
1096 rpsH_gene symmetric: 65,86
1099 rpsH_gene flipped: 2,74,79
1111 rpsH_gene flipped: 62,112
π± Sticky-3 1097-1099 with 3 candidates
1098 rpsH_gene flipped: 23,70,119
π Short stem 1100-1109 - 2-pair stem - open loops: πΈ Sticky loop 1102-1107 (6)
1100 rpsH_gene symmetric: 91
1107 rpsH_gene normal: 18,67,76,118
1107 rpsH_gene flipped: 54
1108 rpsH_gene normal: 2,74,79
1109 rpsH_gene normal: 23,70,119
πΈ Sticky loop 1102-1107 (6) with 13 candidates
1102 rpsH_gene symmetric: 34,39
1104 rpsH_gene flipped: 18,67,76,118
1104 rpsH_gene normal: 54
1105 rpsH_gene normal: 25,78
1105 rpsH_gene flipped: 81
1106 rpsH_gene flipped: 25,78
1106 rpsH_gene normal: 81
βοΈ Belt 1173-1194 - (9-pair stem - open loops: πΈ Sticky loop 1182-1185 (4))
1175 rpsH_gene normal: 128
1176 rpsH_gene flipped: 35,102,115
1177 rpsH_gene symmetric: 80,84,117
1178 rpsH_gene normal: 35,102,115
1179 rpsH_gene normal: 4
1179 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1180 rpsH_gene flipped: 4
1180 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1181 rpsH_gene symmetric: 105,107
1186 rpsH_gene flipped: 25,78
1186 rpsH_gene normal: 81
1187 rpsH_gene flipped: 128
1189 rpsH_gene flipped: 28,57
1189 rpsH_gene normal: 29,30
1192 rpsH_gene normal: 28,57
1192 rpsH_gene flipped: 29,30
1194 rpsH_gene flipped: 23,70,119
πΈ Sticky loop 1182-1185 (4) with 23 candidates
1182 rpsH_gene normal: 4
1182 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1183 rpsH_gene flipped: 4
1183 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1184 rpsH_gene normal: 25,78
1184 rpsH_gene flipped: 81
βοΈ Belt 1207-1253 - (7-pair stem - open loops: π Bump-1 1214)
1207 rpsH_gene flipped: 12,26,55,106
1207 rpsH_gene normal: 66
1208 rpsH_gene flipped: 18,67,76,118
1208 rpsH_gene normal: 54
1209 rpsH_gene flipped: 35,102,115
1210 rpsH_gene symmetric: 80,84,117
1211 rpsH_gene normal: 23,70,119
1212 rpsH_gene flipped: 66
1213 rpsH_gene normal: 66
1214 rpsH_gene flipped: 28,57
1214 rpsH_gene normal: 29,30
π Short stem 1215-1256 - 3-pair stem - open loops: πΈ Sticky loop 1218-1223 (6), π± Sticky-3 1244-1246
1215 rpsH_gene flipped: 25,78
1215 rpsH_gene normal: 81
1217 rpsH_gene symmetric: 105,107
1246 rpsH_gene normal: 66
1247 rpsH_gene flipped: 62,112
1249 rpsH_gene flipped: 35,102,115
1250 rpsH_gene symmetric: 80,84,117
1251 rpsH_gene normal: 23,70,119
1252 rpsH_gene flipped: 66
πΈ Sticky loop 1218-1223 (6) with 13 candidates
1219 rpsH_gene flipped: 35,102,115
1220 rpsH_gene flipped: 2,74,79
1221 rpsH_gene flipped: 18,67,76,118
1221 rpsH_gene normal: 54
1222 rpsH_gene symmetric: 105,107
π± Sticky-3 1244-1246 with 3 candidates
1244 rpsH_gene symmetric: 105,107
1245 rpsH_gene flipped: 66
βοΈ Belt 1224-1243 - (8-pair stem - open loops: πΈ Sticky loop 1232-1235 (4))
1224 rpsH_gene normal: 62,112
1226 rpsH_gene flipped: 28,57
1226 rpsH_gene normal: 29,30
1227 rpsH_gene normal: 6,93
1228 rpsH_gene normal: 13,15,77,88,114
1228 rpsH_gene flipped: 127
1229 rpsH_gene flipped: 1,3,10,27,96,111
1229 rpsH_gene normal: 72,129
1230 rpsH_gene normal: 128
1231 rpsH_gene flipped: 35,102,115
1235 rpsH_gene normal: 28,57
1235 rpsH_gene flipped: 29,30
1237 rpsH_gene flipped: 28,57
1237 rpsH_gene normal: 29,30
1238 rpsH_gene flipped: 25,78
1238 rpsH_gene normal: 81
1239 rpsH_gene flipped: 128
1241 rpsH_gene flipped: 5,9,48,90,113
1243 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1243 rpsH_gene normal: 25,78
πΈ Sticky loop 1232-1235 (4) with 11 candidates
1232 rpsH_gene flipped: 2,74,79
1233 rpsH_gene flipped: 18,67,76,118
1233 rpsH_gene normal: 54
1234 rpsH_gene normal: 25,78
1234 rpsH_gene flipped: 81
π Medium stem 1271-2020 - (4-pair stem - open loops: π Bump-1 1275
1272 rpsH_gene symmetric: 65,86
1275 rpsH_gene normal: 66
π Medium stem 1276-2024 - (4-pair stem - open loops: πΈ Sticky five 1280-1284, π° Bump-2 1655-1656
1276 rpsH_gene flipped: 23,70,119
1277 rpsH_gene symmetric: 80,84,117
1278 rpsH_gene flipped: 6,93
1656 rpsH_gene symmetric: 91
πΈ Sticky five 1280-1284 with 6 candidates
1280 rpsH_gene flipped: 25,78
1280 rpsH_gene normal: 81
1282 rpsH_gene normal: 62,112
1283 rpsH_gene flipped: 66
π Medium stem 1285-1303 - (6-pair stem - open loops: πΈ Sticky loop 1291-1297 (7)
1286 rpsH_gene normal: 66
1287 rpsH_gene flipped: 23,70,119
1288 rpsH_gene flipped: 53,68,123
1290 rpsH_gene normal: 53,68,123
1297 rpsH_gene normal: 53,68,123
1298 rpsH_gene flipped: 6,93
1299 rpsH_gene normal: 28,57
1299 rpsH_gene flipped: 29,30
1300 rpsH_gene flipped: 66
1301 rpsH_gene normal: 66
1302 rpsH_gene symmetric: 105,107
1303 rpsH_gene normal: 11,32,40,59,63,83,92,99
1303 rpsH_gene flipped: 25,78
πΈ Sticky loop 1291-1297 (7) with 20 candidates
1291 rpsH_gene symmetric: 8,20,24,97,116
1292 rpsH_gene flipped: 2,74,79
1293 rpsH_gene symmetric: 91
1294 rpsH_gene normal: 2,74,79
1295 rpsH_gene symmetric: 8,20,24,97,116
1296 rpsH_gene flipped: 53,68,123
π Medium stem 1304-1654 - (4-pair stem - open loops: πΈ Sticky loop 1308-1311 (4), π Bump-1 1635, π° Bump-2 1649-1650
1304 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1304 rpsH_gene normal: 29,30
1305 rpsH_gene normal: 17,44,82,98,100,109,120,122
1305 rpsH_gene flipped: 29,30
1306 rpsH_gene normal: 51,71,95,103,104,110
1307 rpsH_gene normal: 66
1311 rpsH_gene normal: 4
1311 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1635 rpsH_gene symmetric: 65,86
1650 rpsH_gene symmetric: 105,107
1652 rpsH_gene symmetric: 105,107
1653 rpsH_gene flipped: 66
1654 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 1308-1311 (4) with 7 candidates
1308 rpsH_gene flipped: 28,57
1308 rpsH_gene normal: 29,30
1310 rpsH_gene flipped: 25,78
1310 rpsH_gene normal: 81
π Medium stem 1312-1634 - (4-pair stem - open loops: π° Bump-2 1316-1317, πΈ Sticky five 1615-1619, π Bump-1 1630
1312 rpsH_gene normal: 28,31,41,56,57,64
1313 rpsH_gene normal: 12,26,55,106
1313 rpsH_gene flipped: 66
1314 rpsH_gene flipped: 12,26,55,106
1314 rpsH_gene normal: 66
1315 rpsH_gene flipped: 18,67,76,118
1315 rpsH_gene normal: 54
1317 rpsH_gene normal: 18,67,76,118
1317 rpsH_gene flipped: 54
1619 rpsH_gene flipped: 25,78
1619 rpsH_gene normal: 81
1630 rpsH_gene symmetric: 105,107
1632 rpsH_gene symmetric: 105,107
1633 rpsH_gene flipped: 66
π° Bump-2 1316-1317 with 2 candidates
1316 rpsH_gene symmetric: 105,107
πΈ Sticky five 1615-1619 with 16 candidates
1615 rpsH_gene symmetric: 34,39
1617 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1617 rpsH_gene normal: 25,78
1618 rpsH_gene flipped: 28,57
1618 rpsH_gene normal: 29,30
π Short stem 1318-1613 - 2-pair stem - open loops: π° Bump-2 1320-1321
1318 rpsH_gene normal: 12,26,55,106
1318 rpsH_gene flipped: 66
1319 rpsH_gene normal: 17,44,82,98,100,109,120,122
1319 rpsH_gene flipped: 29,30
1321 rpsH_gene flipped: 51,71,95,103,104,110
π° Bump-2 1320-1321 with 6 candidates
1320 rpsH_gene normal: 51,71,95,103,104,110
βοΈ Belt 1322-1614 - (7-pair stem - open loops: π± Sticky-3 1329-1331, π Bump-1 1341, πΈ Sticky loop 1348-1353 (6), π Bump-1 1611)
1322 rpsH_gene flipped: 13,15,77,88,114
1322 rpsH_gene normal: 127
1323 rpsH_gene normal: 35,102,115
1324 rpsH_gene normal: 4
1324 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1328 rpsH_gene flipped: 5,9,48,90,113
1342 rpsH_gene flipped: 62,112
1343 rpsH_gene normal: 18,67,76,118
1343 rpsH_gene flipped: 54
1344 rpsH_gene normal: 2,74,79
1345 rpsH_gene normal: 23,70,119
1346 rpsH_gene normal: 11,32,40,59,63,83,92,99
1346 rpsH_gene flipped: 25,78
1347 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1347 rpsH_gene normal: 29,30
1353 rpsH_gene normal: 66
1600 rpsH_gene normal: 35,102,115
1601 rpsH_gene flipped: 128
1602 rpsH_gene normal: 1,3,10,27,96,111
1602 rpsH_gene flipped: 72,129
1603 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1603 rpsH_gene normal: 29,30
1606 rpsH_gene normal: 17,44,82,98,100,109,120,122
1606 rpsH_gene flipped: 29,30
1607 rpsH_gene normal: 51,71,95,103,104,110
1609 rpsH_gene flipped: 51,71,95,103,104,110
1610 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1610 rpsH_gene normal: 29,30
1611 rpsH_gene normal: 53,68,123
1612 rpsH_gene normal: 23,70,119
1613 rpsH_gene normal: 11,32,40,59,63,83,92,99
1613 rpsH_gene flipped: 25,78
π± Sticky-3 1329-1331 with 5 candidates
1329 rpsH_gene normal: 2,74,79
1330 rpsH_gene flipped: 6,93
πΈ Sticky loop 1348-1353 (6) with 10 candidates
1350 rpsH_gene flipped: 12,26,55,106
1350 rpsH_gene normal: 66
1351 rpsH_gene normal: 5,9,48,90,113
π Short stem 1332-1340 - 2-pair stem - open loops: πΈ Sticky five 1334-1338
1333 rpsH_gene normal: 6,93
1338 rpsH_gene flipped: 25,78
1338 rpsH_gene normal: 81
1340 rpsH_gene normal: 62,112
πΈ Sticky five 1334-1338 with 20 candidates
1334 rpsH_gene normal: 13,15,77,88,114
1334 rpsH_gene flipped: 127
1335 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1335 rpsH_gene normal: 25,78
1336 rpsH_gene flipped: 28,57
1336 rpsH_gene normal: 29,30
π Medium stem 1354-1599 - (4-pair stem - open loops: π Bump-1 1358, π± Sticky-3 1391-1393, π° Bump-2 1412-1413
1354 rpsH_gene flipped: 28,57
1354 rpsH_gene normal: 29,30
1355 rpsH_gene normal: 6,93
1356 rpsH_gene symmetric: 80,84,117
1357 rpsH_gene normal: 23,70,119
1393 rpsH_gene symmetric: 65,86
π° Bump-2 1412-1413 with 8 candidates
1412 rpsH_gene normal: 1,3,10,27,96,111
1412 rpsH_gene flipped: 72,129
π Short stem 1359-1390 - 2-pair stem - open loops: π± Sticky-3 1361-1363, π± Sticky-3 1386-1388
1359 rpsH_gene flipped: 28,57
1359 rpsH_gene normal: 29,30
1360 rpsH_gene normal: 6,93
1363 rpsH_gene normal: 23,70,119
1388 rpsH_gene flipped: 25,78
1388 rpsH_gene normal: 81
1389 rpsH_gene normal: 4
1389 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
π± Sticky-3 1361-1363 with 6 candidates
1361 rpsH_gene flipped: 53,68,123
1362 rpsH_gene normal: 53,68,123
π± Sticky-3 1386-1388 with 14 candidates
1386 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1386 rpsH_gene normal: 25,78
1387 rpsH_gene flipped: 28,57
1387 rpsH_gene normal: 29,30
π Short stem 1364-1385 - 3-pair stem - open loops: π Bump-1 1367, π Bump-1 1382
1364 rpsH_gene flipped: 66
1366 rpsH_gene normal: 66
1367 rpsH_gene flipped: 28,57
1367 rpsH_gene normal: 29,30
1382 rpsH_gene flipped: 66
1384 rpsH_gene flipped: 51,71,95,103,104,110
π Short stem 1368-1381 - 1-pair stem - open loops: π Bump-1 1369, π Bump-1 1380
1368 rpsH_gene normal: 6,93
1369 rpsH_gene symmetric: 80,84,117
1381 rpsH_gene normal: 28,57
1381 rpsH_gene flipped: 29,30
π Short stem 1370-1379 - 3-pair stem - open loops: πΈ Sticky loop 1373-1376 (4)
1370 rpsH_gene normal: 35,102,115
1371 rpsH_gene flipped: 128
1376 rpsH_gene normal: 23,70,119
1378 rpsH_gene normal: 128
1379 rpsH_gene normal: 25,78
1379 rpsH_gene flipped: 81
πΈ Sticky loop 1373-1376 (4) with 10 candidates
1373 rpsH_gene flipped: 62,112
1374 rpsH_gene normal: 18,67,76,118
1374 rpsH_gene flipped: 54
1375 rpsH_gene normal: 2,74,79
π Medium stem 1394-1411 - (5-pair stem - open loops: πΈ Sticky loop 1399-1406 (8)
1396 rpsH_gene normal: 28,31,41,56,57,64
1397 rpsH_gene normal: 12,26,55,106
1397 rpsH_gene flipped: 66
1398 rpsH_gene flipped: 12,26,55,106
1398 rpsH_gene normal: 66
1406 rpsH_gene normal: 25,78
1406 rpsH_gene flipped: 81
1407 rpsH_gene flipped: 25,78
1407 rpsH_gene normal: 81
1409 rpsH_gene symmetric: 105,107
1410 rpsH_gene normal: 4
1410 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
πΈ Sticky loop 1399-1406 (8) with 32 candidates
1399 rpsH_gene flipped: 18,67,76,118
1399 rpsH_gene normal: 54
1400 rpsH_gene symmetric: 105,107
1401 rpsH_gene flipped: 128
1402 rpsH_gene normal: 1,3,10,27,96,111
1402 rpsH_gene flipped: 72,129
1404 rpsH_gene flipped: 28,31,41,56,57,64
1405 rpsH_gene flipped: 4
1405 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
βοΈ Belt 1414-1610 - (13-pair stem - open loops: π° Bump-2 1427-1428, π° Bump-2 1588-1589, πΈ Sticky loop 1592-1595 (4))
1414 rpsH_gene flipped: 18,67,76,118
1414 rpsH_gene normal: 54
1415 rpsH_gene flipped: 35,102,115
1416 rpsH_gene symmetric: 80,84,117
1417 rpsH_gene normal: 23,70,119
1418 rpsH_gene flipped: 66
1419 rpsH_gene normal: 66
1420 rpsH_gene flipped: 28,57
1420 rpsH_gene normal: 29,30
1425 rpsH_gene normal: 28,57
1425 rpsH_gene flipped: 29,30
1426 rpsH_gene normal: 11,32,40,59,63,83,92,99
1426 rpsH_gene flipped: 25,78
1428 rpsH_gene flipped: 6,93
1590 rpsH_gene flipped: 51,71,95,103,104,110
1595 rpsH_gene normal: 51,71,95,103,104,110
1598 rpsH_gene flipped: 5,9,48,90,113
1599 rpsH_gene normal: 2,74,79
π° Bump-2 1427-1428 with 6 candidates
1427 rpsH_gene flipped: 13,15,77,88,114
1427 rpsH_gene normal: 127
π° Bump-2 1588-1589 with 1 candidates
1588 rpsH_gene flipped: 128
πΈ Sticky loop 1592-1595 (4) with 13 candidates
1592 rpsH_gene flipped: 1,3,10,27,96,111
1592 rpsH_gene normal: 72,129
1593 rpsH_gene flipped: 5,9,48,90,113
π Medium stem 1429-1587 - (6-pair stem - open loops: π± Sticky-3 1435-1437, πΈ Sticky loop 1574-1581 (8)
1429 rpsH_gene normal: 28,57
1429 rpsH_gene flipped: 29,30
1431 rpsH_gene symmetric: 105,107
1432 rpsH_gene flipped: 66
1433 rpsH_gene normal: 66
1434 rpsH_gene flipped: 28,57
1434 rpsH_gene normal: 29,30
1437 rpsH_gene normal: 5,9,48,90,113
1581 rpsH_gene normal: 13,15,77,88,114
1581 rpsH_gene flipped: 127
1582 rpsH_gene flipped: 1,3,10,27,96,111
1582 rpsH_gene normal: 72,129
1583 rpsH_gene flipped: 5,9,48,90,113
1585 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1585 rpsH_gene normal: 25,78
1586 rpsH_gene flipped: 28,57
1586 rpsH_gene normal: 29,30
1587 rpsH_gene flipped: 25,78
1587 rpsH_gene normal: 81
π± Sticky-3 1435-1437 with 5 candidates
1435 rpsH_gene normal: 6,93
1436 rpsH_gene flipped: 2,74,79
πΈ Sticky loop 1574-1581 (8) with 15 candidates
1574 rpsH_gene flipped: 12,26,55,106
1574 rpsH_gene normal: 66
1575 rpsH_gene symmetric: 91
1577 rpsH_gene normal: 5,9,48,90,113
1579 rpsH_gene normal: 66
1580 rpsH_gene flipped: 23,70,119
π Medium stem 1438-1573 - (4-pair stem - open loops: π° Bump-2 1442-1443, π± Sticky-3 1567-1569
1439 rpsH_gene normal: 128
1440 rpsH_gene symmetric: 105,107
1441 rpsH_gene normal: 4
1441 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1443 rpsH_gene normal: 25,78
1443 rpsH_gene flipped: 81
1571 rpsH_gene normal: 66
1572 rpsH_gene flipped: 23,70,119
1573 rpsH_gene flipped: 53,68,123
π° Bump-2 1442-1443 with 10 candidates
1442 rpsH_gene flipped: 4
1442 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
π± Sticky-3 1567-1569 with 5 candidates
1567 rpsH_gene normal: 28,57
1567 rpsH_gene flipped: 29,30
1568 rpsH_gene flipped: 66
π Short stem 1444-1566 - 3-pair stem - open loops: π° Bump-2 1447-1448, π± Sticky-3 1561-1563
1444 rpsH_gene normal: 6,93
1445 rpsH_gene flipped: 53,68,123
1446 rpsH_gene normal: 53,68,123
1563 rpsH_gene normal: 12,26,55,106
1563 rpsH_gene flipped: 66
1564 rpsH_gene normal: 17,44,82,98,100,109,120,122
1564 rpsH_gene flipped: 29,30
1565 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1565 rpsH_gene normal: 25,78
1566 rpsH_gene flipped: 28,57
1566 rpsH_gene normal: 29,30
π° Bump-2 1447-1448 with 2 candidates
1447 rpsH_gene flipped: 6,93
π± Sticky-3 1561-1563 with 12 candidates
1561 rpsH_gene flipped: 28,31,41,56,57,64
1562 rpsH_gene normal: 28,31,41,56,57,64
βοΈ Belt 1449-1560 - (11-pair stem - open loops: πΈ Sticky loop 1460-1469 (10), π Bump-1 1535, π° Bump-2 1554-1555)
1449 rpsH_gene normal: 6,93
1450 rpsH_gene symmetric: 80,84,117
1451 rpsH_gene normal: 23,70,119
1452 rpsH_gene normal: 11,32,40,59,63,83,92,99
1452 rpsH_gene flipped: 25,78
1453 rpsH_gene flipped: 13,15,77,88,114
1453 rpsH_gene normal: 127
1454 rpsH_gene flipped: 6,93
1455 rpsH_gene flipped: 25,78
1455 rpsH_gene normal: 81
1456 rpsH_gene normal: 4
1456 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1457 rpsH_gene flipped: 4
1457 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1458 rpsH_gene symmetric: 105,107
1459 rpsH_gene normal: 18,67,76,118
1459 rpsH_gene flipped: 54
1469 rpsH_gene normal: 66
1470 rpsH_gene flipped: 23,70,119
1471 rpsH_gene symmetric: 80,84,117
1472 rpsH_gene normal: 35,102,115
1474 rpsH_gene symmetric: 105,107
1475 rpsH_gene flipped: 128
1535 rpsH_gene flipped: 13,15,77,88,114
1535 rpsH_gene normal: 127
1555 rpsH_gene flipped: 53,68,123
1557 rpsH_gene flipped: 12,26,55,106
1557 rpsH_gene normal: 66
1558 rpsH_gene flipped: 18,67,76,118
1558 rpsH_gene normal: 54
1559 rpsH_gene flipped: 35,102,115
1560 rpsH_gene flipped: 2,74,79
πΈ Sticky loop 1460-1469 (10) with 23 candidates
1460 rpsH_gene normal: 12,26,55,106
1460 rpsH_gene flipped: 66
1462 rpsH_gene normal: 53,68,123
1463 rpsH_gene flipped: 6,93
1464 rpsH_gene flipped: 25,78
1464 rpsH_gene normal: 81
1465 rpsH_gene normal: 4
1465 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
π° Bump-2 1554-1555 with 3 candidates
1554 rpsH_gene flipped: 35,102,115
π Short stem 1476-1534 - 3-pair stem - open loops: π Bump-1 1479, π° Bump-2 1530-1531
1477 rpsH_gene flipped: 28,57
1477 rpsH_gene normal: 29,30
1478 rpsH_gene normal: 6,93
1479 rpsH_gene flipped: 2,74,79
1531 rpsH_gene symmetric: 34,39
1533 rpsH_gene normal: 5,9,48,90,113
1534 rpsH_gene normal: 1,3,10,27,96,111
1534 rpsH_gene flipped: 72,129
π° Bump-2 1530-1531 with 6 candidates
1530 rpsH_gene normal: 13,15,77,88,114
1530 rpsH_gene flipped: 127
π Medium stem 1480-1529 - (4-pair stem - open loops: π± Sticky-3 1484-1486, π± Sticky-3 1523-1525
1480 rpsH_gene flipped: 18,67,76,118
1480 rpsH_gene normal: 54
1481 rpsH_gene normal: 25,78
1481 rpsH_gene flipped: 81
1482 rpsH_gene flipped: 25,78
1482 rpsH_gene normal: 81
1483 rpsH_gene normal: 4
1483 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1486 rpsH_gene normal: 28,31,41,56,57,64
1525 rpsH_gene flipped: 13,15,77,88,114
1525 rpsH_gene normal: 127
1526 rpsH_gene normal: 23,70,119
1528 rpsH_gene flipped: 28,57
1528 rpsH_gene normal: 29,30
1529 rpsH_gene normal: 6,93
π± Sticky-3 1523-1525 with 12 candidates
1523 rpsH_gene normal: 62,112
1524 rpsH_gene normal: 11,32,40,59,63,83,92,99
1524 rpsH_gene flipped: 25,78
βοΈ Belt 1487-1522 - (12-pair stem - open loops: π Bump-1 1499, π° Bump-2 1518-1519)
1487 rpsH_gene normal: 12,26,55,106
1487 rpsH_gene flipped: 66
1488 rpsH_gene normal: 17,44,82,98,100,109,120,122
1488 rpsH_gene flipped: 29,30
1489 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1489 rpsH_gene normal: 25,78
1490 rpsH_gene flipped: 28,57
1490 rpsH_gene normal: 29,30
1491 rpsH_gene normal: 6,93
1492 rpsH_gene normal: 13,15,77,88,114
1492 rpsH_gene flipped: 127
1493 rpsH_gene normal: 51,71,95,103,104,110
1496 rpsH_gene flipped: 5,9,48,90,113
1497 rpsH_gene normal: 12,26,55,106
1497 rpsH_gene flipped: 66
1498 rpsH_gene normal: 53,68,123
1499 rpsH_gene flipped: 6,93
1520 rpsH_gene normal: 62,112
1522 rpsH_gene normal: 128
π° Bump-2 1518-1519 with 3 candidates
1518 rpsH_gene normal: 35,102,115
π Short stem 1500-1517 - 2-pair stem - open loops: πΈ Sticky five 1502-1506
1500 rpsH_gene normal: 28,57
1500 rpsH_gene flipped: 29,30
1501 rpsH_gene flipped: 66
1507 rpsH_gene normal: 51,71,95,103,104,110
1508 rpsH_gene normal: 66
1509 rpsH_gene flipped: 28,57
1509 rpsH_gene normal: 29,30
1510 rpsH_gene normal: 6,93
1511 rpsH_gene flipped: 2,74,79
1512 rpsH_gene flipped: 18,67,76,118
1512 rpsH_gene normal: 54
1513 rpsH_gene normal: 62,112
1515 rpsH_gene flipped: 28,57
1515 rpsH_gene normal: 29,30
1516 rpsH_gene normal: 6,93
1517 rpsH_gene symmetric: 80,84,117
πΈ Sticky five 1502-1506 with 5 candidates
1505 rpsH_gene flipped: 5,9,48,90,113
βοΈ Belt 1536-1553 - (7-pair stem - open loops: πΈ Sticky loop 1543-1546 (4))
1536 rpsH_gene flipped: 6,93
1537 rpsH_gene flipped: 25,78
1537 rpsH_gene normal: 81
1539 rpsH_gene flipped: 35,102,115
1540 rpsH_gene flipped: 2,74,79
1541 rpsH_gene flipped: 18,67,76,118
1541 rpsH_gene normal: 54
1542 rpsH_gene normal: 62,112
1546 rpsH_gene normal: 13,15,77,88,114
1546 rpsH_gene flipped: 127
1547 rpsH_gene normal: 51,71,95,103,104,110
1548 rpsH_gene flipped: 51,71,95,103,104,110
1550 rpsH_gene normal: 51,71,95,103,104,110
1553 rpsH_gene normal: 128
πΈ Sticky loop 1543-1546 (4) with 5 candidates
1543 rpsH_gene flipped: 66
1544 rpsH_gene normal: 66
1545 rpsH_gene flipped: 23,70,119
π Short stem 1620-1629 - 2-pair stem - open loops: πΈ Sticky loop 1622-1627 (6)
1621 rpsH_gene normal: 25,78
1621 rpsH_gene flipped: 81
1627 rpsH_gene flipped: 25,78
1627 rpsH_gene normal: 81
1628 rpsH_gene flipped: 128
πΈ Sticky loop 1622-1627 (6) with 22 candidates
1622 rpsH_gene flipped: 25,78
1622 rpsH_gene normal: 81
1623 rpsH_gene normal: 18,67,76,118
1623 rpsH_gene flipped: 54
1625 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1625 rpsH_gene normal: 25,78
1626 rpsH_gene flipped: 28,57
1626 rpsH_gene normal: 29,30
π Medium stem 1636-1648 - (4-pair stem - open loops: πΈ Sticky five 1640-1644
1636 rpsH_gene normal: 1,3,10,27,96,111
1636 rpsH_gene flipped: 72,129
1637 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1637 rpsH_gene normal: 29,30
1638 rpsH_gene normal: 17,44,82,98,100,109,120,122
1638 rpsH_gene flipped: 29,30
1639 rpsH_gene normal: 51,71,95,103,104,110
1644 rpsH_gene symmetric: 8,20,24,97,116
1645 rpsH_gene flipped: 2,74,79
1646 rpsH_gene flipped: 28,31,41,56,57,64
1647 rpsH_gene flipped: 4
1647 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1648 rpsH_gene normal: 62,112
πΈ Sticky five 1640-1644 with 10 candidates
1640 rpsH_gene normal: 66
1641 rpsH_gene flipped: 28,57
1641 rpsH_gene normal: 29,30
1642 rpsH_gene normal: 6,93
1643 rpsH_gene symmetric: 80,84,117
π Medium stem 1657-2028 - (4-pair stem - open loops: πΈ Sticky loop 1661-1664 (4), π Bump-1 2016
1657 rpsH_gene normal: 2,74,79
1658 rpsH_gene flipped: 6,93
1660 rpsH_gene flipped: 25,78
1660 rpsH_gene normal: 81
1664 rpsH_gene normal: 66
2016 rpsH_gene flipped: 4
2016 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2017 rpsH_gene normal: 62,112
2018 rpsH_gene flipped: 66
2019 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 1661-1664 (4) with 3 candidates
1662 rpsH_gene normal: 62,112
1663 rpsH_gene flipped: 66
βοΈ Belt 1665-2015 - (8-pair stem - open loops: π Bump-1 1673, π Bump-1 2007)
1665 rpsH_gene flipped: 28,57
1665 rpsH_gene normal: 29,30
1666 rpsH_gene normal: 28,57
1666 rpsH_gene flipped: 29,30
1667 rpsH_gene flipped: 66
1668 rpsH_gene flipped: 51,71,95,103,104,110
1670 rpsH_gene normal: 5,9,48,90,113
1672 rpsH_gene flipped: 28,57
1672 rpsH_gene normal: 29,30
1673 rpsH_gene normal: 6,93
2008 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2008 rpsH_gene normal: 25,78
2009 rpsH_gene flipped: 62,112
2011 rpsH_gene normal: 62,112
2012 rpsH_gene flipped: 66
π Medium stem 1674-2006 - (5-pair stem - open loops: π Sticky hub 1679-1690 (12), πΈ Sticky loop 1766-1772 (7), π° Bump-2 2000-2001
1674 rpsH_gene normal: 13,15,77,88,114
1674 rpsH_gene flipped: 127
1675 rpsH_gene normal: 51,71,95,103,104,110
1772 rpsH_gene flipped: 51,71,95,103,104,110
2001 rpsH_gene normal: 23,70,119
2003 rpsH_gene symmetric: 105,107
2004 rpsH_gene normal: 11,32,40,59,63,83,92,99
2004 rpsH_gene flipped: 25,78
2006 rpsH_gene symmetric: 91
π Sticky hub 1679-1690 (12) with 26 candidates
1679 rpsH_gene normal: 128
1680 rpsH_gene normal: 25,78
1680 rpsH_gene flipped: 81
1681 rpsH_gene flipped: 25,78
1681 rpsH_gene normal: 81
1683 rpsH_gene flipped: 35,102,115
1684 rpsH_gene flipped: 53,68,123
1685 rpsH_gene normal: 53,68,123
1686 rpsH_gene normal: 35,102,115
1687 rpsH_gene flipped: 128
1689 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 1766-1772 (7) with 25 candidates
1766 rpsH_gene normal: 6,93
1767 rpsH_gene flipped: 2,74,79
1768 rpsH_gene flipped: 18,67,76,118
1768 rpsH_gene normal: 54
1769 rpsH_gene flipped: 35,102,115
1770 rpsH_gene normal: 13,15,77,88,114
1770 rpsH_gene flipped: 127
1771 rpsH_gene normal: 51,71,95,103,104,110
π° Bump-2 2000-2001 with 3 candidates
2000 rpsH_gene normal: 53,68,123
π Medium stem 1691-1715 - (5-pair stem - open loops: π± Sticky-3 1696-1698, πΈ Sticky loop 1707-1710 (4)
1691 rpsH_gene flipped: 28,31,41,56,57,64
1692 rpsH_gene normal: 28,31,41,56,57,64
1693 rpsH_gene normal: 2,74,79
1694 rpsH_gene flipped: 6,93
1698 rpsH_gene symmetric: 105,107
1711 rpsH_gene symmetric: 65,86
1713 rpsH_gene normal: 128
1714 rpsH_gene symmetric: 105,107
1715 rpsH_gene flipped: 128
π± Sticky-3 1696-1698 with 4 candidates
1696 rpsH_gene normal: 28,57
1696 rpsH_gene flipped: 29,30
πΈ Sticky loop 1707-1710 (4) with 10 candidates
1707 rpsH_gene flipped: 2,74,79
1708 rpsH_gene flipped: 18,67,76,118
1708 rpsH_gene normal: 54
1709 rpsH_gene normal: 62,112
π Short stem 1699-1706 - 2-pair stem - open loops: πΈ Sticky loop 1701-1704 (4)
1699 rpsH_gene flipped: 66
1700 rpsH_gene normal: 66
1704 rpsH_gene symmetric: 34,39
1705 rpsH_gene flipped: 13,15,77,88,114
1705 rpsH_gene normal: 127
1706 rpsH_gene symmetric: 8,20,24,97,116
πΈ Sticky loop 1701-1704 (4) with 12 candidates
1701 rpsH_gene flipped: 28,57
1701 rpsH_gene normal: 29,30
1702 rpsH_gene normal: 6,93
1703 rpsH_gene normal: 13,15,77,88,114
1703 rpsH_gene flipped: 127
π Medium stem 1716-1760 - (6-pair stem - open loops: π± Sticky-3 1722-1724, π° Bump-2 1753-1754
1717 rpsH_gene flipped: 28,57
1717 rpsH_gene normal: 29,30
1718 rpsH_gene flipped: 25,78
1718 rpsH_gene normal: 81
1720 rpsH_gene normal: 62,112
1724 rpsH_gene normal: 18,67,76,118
1724 rpsH_gene flipped: 54
1754 rpsH_gene normal: 66
1755 rpsH_gene symmetric: 105,107
1757 rpsH_gene symmetric: 65,86
1758 rpsH_gene normal: 1,3,10,27,96,111
1758 rpsH_gene flipped: 72,129
1759 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1759 rpsH_gene normal: 29,30
1760 rpsH_gene normal: 17,44,82,98,100,109,120,122
1760 rpsH_gene flipped: 29,30
π± Sticky-3 1722-1724 with 7 candidates
1722 rpsH_gene flipped: 28,57
1722 rpsH_gene normal: 29,30
1723 rpsH_gene flipped: 25,78
1723 rpsH_gene normal: 81
π° Bump-2 1753-1754 with 1 candidates
1753 rpsH_gene flipped: 66
π Short stem 1725-1752 - 3-pair stem - open loops: πΈ Sticky five 1728-1732, πΈ Sticky loop 1746-1749 (4)
1725 rpsH_gene normal: 12,26,55,106
1725 rpsH_gene flipped: 66
1727 rpsH_gene flipped: 12,26,55,106
1727 rpsH_gene normal: 66
1732 rpsH_gene flipped: 6,93
1749 rpsH_gene flipped: 62,112
1750 rpsH_gene normal: 18,67,76,118
1750 rpsH_gene flipped: 54
1751 rpsH_gene normal: 2,74,79
1752 rpsH_gene normal: 23,70,119
πΈ Sticky five 1728-1732 with 12 candidates
1728 rpsH_gene symmetric: 91
1729 rpsH_gene normal: 2,74,79
1730 rpsH_gene symmetric: 8,20,24,97,116
1731 rpsH_gene symmetric: 80,84,117
πΈ Sticky loop 1746-1749 (4) with 15 candidates
1746 rpsH_gene flipped: 5,9,48,90,113
1748 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1748 rpsH_gene normal: 25,78
π Medium stem 1733-1745 - (4-pair stem - open loops: πΈ Sticky five 1737-1741
1733 rpsH_gene normal: 28,57
1733 rpsH_gene flipped: 29,30
1735 rpsH_gene normal: 128
1736 rpsH_gene normal: 25,78
1736 rpsH_gene flipped: 81
1741 rpsH_gene flipped: 18,67,76,118
1741 rpsH_gene normal: 54
1742 rpsH_gene normal: 62,112
1743 rpsH_gene flipped: 66
πΈ Sticky five 1737-1741 with 10 candidates
1737 rpsH_gene normal: 28,57
1737 rpsH_gene flipped: 29,30
1739 rpsH_gene flipped: 23,70,119
1740 rpsH_gene flipped: 2,74,79
π Short stem 1761-1765 - 1-pair stem - open loops: π± Sticky-3 1762-1764
1761 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1761 rpsH_gene normal: 25,78
1764 rpsH_gene flipped: 18,67,76,118
1764 rpsH_gene normal: 54
1765 rpsH_gene normal: 25,78
1765 rpsH_gene flipped: 81
π± Sticky-3 1762-1764 with 6 candidates
1762 rpsH_gene flipped: 23,70,119
1763 rpsH_gene flipped: 2,74,79
βοΈ Belt 1773-1999 - (9-pair stem - open loops: π° Bump-2 1782-1783, π° Bump-2 1799-1800, π° Bump-2 1837-1838, π± Sticky-3 1987-1989, π Bump-1 1992)
1774 rpsH_gene flipped: 18,67,76,118
1774 rpsH_gene normal: 54
1775 rpsH_gene symmetric: 105,107
1776 rpsH_gene normal: 4
1776 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1800 rpsH_gene normal: 51,71,95,103,104,110
1838 rpsH_gene flipped: 6,93
1989 rpsH_gene flipped: 2,74,79
1990 rpsH_gene flipped: 18,67,76,118
1990 rpsH_gene normal: 54
1991 rpsH_gene symmetric: 105,107
1992 rpsH_gene normal: 18,67,76,118
1992 rpsH_gene flipped: 54
1994 rpsH_gene symmetric: 91
1995 rpsH_gene normal: 12,26,55,106
1995 rpsH_gene flipped: 66
1996 rpsH_gene normal: 17,44,82,98,100,109,120,122
1996 rpsH_gene flipped: 29,30
1997 rpsH_gene symmetric: 34,39
1998 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1998 rpsH_gene normal: 29,30
π° Bump-2 1799-1800 with 6 candidates
1799 rpsH_gene normal: 13,15,77,88,114
1799 rpsH_gene flipped: 127
π° Bump-2 1837-1838 with 3 candidates
1837 rpsH_gene normal: 53,68,123
π± Sticky-3 1987-1989 with 6 candidates
1987 rpsH_gene flipped: 28,57
1987 rpsH_gene normal: 29,30
1988 rpsH_gene normal: 6,93
π Short stem 1784-1798 - 3-pair stem - open loops: πΈ Sticky loop 1787-1795 (9)
1786 rpsH_gene flipped: 51,71,95,103,104,110
1795 rpsH_gene flipped: 18,67,76,118
1795 rpsH_gene normal: 54
1796 rpsH_gene symmetric: 105,107
1798 rpsH_gene flipped: 35,102,115
πΈ Sticky loop 1787-1795 (9) with 23 candidates
1788 rpsH_gene symmetric: 34,39
1790 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1790 rpsH_gene normal: 25,78
1791 rpsH_gene flipped: 23,70,119
1792 rpsH_gene normal: 13,15,77,88,114
1792 rpsH_gene flipped: 127
1793 rpsH_gene symmetric: 34,39
βοΈ Belt 1801-1836 - (9-pair stem - open loops: π± Sticky-3 1810-1812, π± Sticky-3 1823-1825, π° Bump-2 1827-1828)
1802 rpsH_gene flipped: 51,71,95,103,104,110
1804 rpsH_gene symmetric: 34,39
1805 rpsH_gene flipped: 13,15,77,88,114
1805 rpsH_gene normal: 127
1806 rpsH_gene normal: 23,70,119
1807 rpsH_gene flipped: 66
1809 rpsH_gene normal: 66
1812 rpsH_gene normal: 25,78
1812 rpsH_gene flipped: 81
1825 rpsH_gene symmetric: 105,107
1828 rpsH_gene normal: 11,32,40,59,63,83,92,99
1828 rpsH_gene flipped: 25,78
1829 rpsH_gene flipped: 13,15,77,88,114
1829 rpsH_gene normal: 127
1830 rpsH_gene symmetric: 8,20,24,97,116
1831 rpsH_gene flipped: 53,68,123
1832 rpsH_gene flipped: 12,26,55,106
1832 rpsH_gene normal: 66
1833 rpsH_gene flipped: 18,67,76,118
1833 rpsH_gene normal: 54
1834 rpsH_gene flipped: 35,102,115
1835 rpsH_gene flipped: 53,68,123
π± Sticky-3 1810-1812 with 2 candidates
1810 rpsH_gene flipped: 62,112
π± Sticky-3 1823-1825 with 3 candidates
1823 rpsH_gene flipped: 25,78
1823 rpsH_gene normal: 81
π° Bump-2 1827-1828 with 2 candidates
1827 rpsH_gene normal: 62,112
π Short stem 1813-1822 - 3-pair stem - open loops: πΈ Sticky loop 1816-1819 (4)
1813 rpsH_gene normal: 28,57
1813 rpsH_gene flipped: 29,30
1814 rpsH_gene normal: 11,32,40,59,63,83,92,99
1814 rpsH_gene flipped: 25,78
1815 rpsH_gene flipped: 13,15,77,88,114
1815 rpsH_gene normal: 127
1819 rpsH_gene symmetric: 65,86
1820 rpsH_gene normal: 1,3,10,27,96,111
1820 rpsH_gene flipped: 72,129
1821 rpsH_gene flipped: 13,15,77,88,114
1821 rpsH_gene normal: 127
1822 rpsH_gene flipped: 6,93
πΈ Sticky loop 1816-1819 (4) with 4 candidates
1816 rpsH_gene normal: 35,102,115
1817 rpsH_gene flipped: 128
π Medium stem 1839-1986 - (4-pair stem - open loops: π Bump-1 1843, π Sticky hub 1936-1955 (20), πΈ Sticky loop 1973-1982 (10)
1839 rpsH_gene flipped: 25,78
1839 rpsH_gene normal: 81
1841 rpsH_gene flipped: 35,102,115
1842 rpsH_gene flipped: 53,68,123
1843 rpsH_gene normal: 53,68,123
1916 rpsH_gene symmetric: 65,86
1955 rpsH_gene normal: 28,31,41,56,57,64
1982 rpsH_gene normal: 25,78
1982 rpsH_gene flipped: 81
1983 rpsH_gene normal: 6,93
1984 rpsH_gene flipped: 53,68,123
1985 rpsH_gene normal: 17,44,82,98,100,109,120,122
1985 rpsH_gene flipped: 29,30
1986 rpsH_gene flipped: 11,32,40,59,63,83,92,99
1986 rpsH_gene normal: 25,78
π Sticky hub 1936-1955 (20) with 61 candidates
1939 rpsH_gene normal: 28,31,41,56,57,64
1940 rpsH_gene normal: 12,26,55,106
1940 rpsH_gene flipped: 66
1941 rpsH_gene flipped: 12,26,55,106
1941 rpsH_gene normal: 66
1942 rpsH_gene flipped: 28,31,41,56,57,64
1943 rpsH_gene flipped: 4
1943 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1944 rpsH_gene symmetric: 105,107
1945 rpsH_gene normal: 18,67,76,118
1945 rpsH_gene flipped: 54
1946 rpsH_gene normal: 2,74,79
1947 rpsH_gene flipped: 6,93
1949 rpsH_gene flipped: 25,78
1949 rpsH_gene normal: 81
1950 rpsH_gene flipped: 128
1952 rpsH_gene normal: 66
1953 rpsH_gene flipped: 62,112
1954 rpsH_gene normal: 4
1954 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
πΈ Sticky loop 1973-1982 (10) with 11 candidates
1973 rpsH_gene symmetric: 80,84,117
1974 rpsH_gene normal: 35,102,115
1975 rpsH_gene flipped: 128
1978 rpsH_gene normal: 128
1979 rpsH_gene normal: 62,112
1981 rpsH_gene normal: 128
π Short stem 1844-1914 - 3-pair stem - open loops: π° Bump-2 1847-1848
1844 rpsH_gene flipped: 6,93
1845 rpsH_gene normal: 28,57
1845 rpsH_gene flipped: 29,30
1846 rpsH_gene flipped: 66
1848 rpsH_gene flipped: 28,57
1848 rpsH_gene normal: 29,30
π° Bump-2 1847-1848 with 1 candidates
1847 rpsH_gene normal: 66
βοΈ Belt 1849-1916 - (7-pair stem - open loops: π° Bump-2 1856-1857, π° Bump-2 1910-1911)
1849 rpsH_gene flipped: 25,78
1849 rpsH_gene normal: 81
1850 rpsH_gene normal: 4
1850 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1855 rpsH_gene flipped: 4
1855 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
1912 rpsH_gene flipped: 51,71,95,103,104,110
1914 rpsH_gene normal: 5,9,48,90,113
π° Bump-2 1856-1857 with 2 candidates
1856 rpsH_gene normal: 62,112
π° Bump-2 1910-1911 with 1 candidates
1910 rpsH_gene flipped: 128
π Short stem 1858-1909 - 3-pair stem - open loops: π± Sticky-3 1861-1863, π± Sticky-3 1899-1901
1858 rpsH_gene normal: 128
1859 rpsH_gene normal: 25,78
1859 rpsH_gene flipped: 81
1863 rpsH_gene normal: 4
1863 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
1901 rpsH_gene flipped: 13,15,77,88,114
1901 rpsH_gene normal: 127
1902 rpsH_gene flipped: 6,93
1903 rpsH_gene normal: 6,93
1904 rpsH_gene symmetric: 80,84,117
1905 rpsH_gene flipped: 6,93
1906 rpsH_gene normal: 6,93
1907 rpsH_gene flipped: 53,68,123
1908 rpsH_gene normal: 53,68,123
1909 rpsH_gene normal: 35,102,115
π± Sticky-3 1861-1863 with 3 candidates
1862 rpsH_gene flipped: 25,78
1862 rpsH_gene normal: 81
π± Sticky-3 1899-1901 with 6 candidates
1900 rpsH_gene flipped: 51,71,95,103,104,110
π Short stem 1864-1898 - 2-pair stem - open loops: π Bump-1 1866, π Bump-1 1896
1866 rpsH_gene flipped: 23,70,119
1896 rpsH_gene flipped: 25,78
1896 rpsH_gene normal: 81
1897 rpsH_gene flipped: 128
βοΈ Belt 1867-1895 - (7-pair stem - open loops: π° Bump-2 1874-1875, π± Sticky-3 1886-1888)
1867 rpsH_gene symmetric: 80,84,117
1868 rpsH_gene symmetric: 8,20,24,97,116
1869 rpsH_gene normal: 13,15,77,88,114
1869 rpsH_gene flipped: 127
1870 rpsH_gene normal: 51,71,95,103,104,110
1871 rpsH_gene normal: 66
1872 rpsH_gene flipped: 23,70,119
1873 rpsH_gene symmetric: 80,84,117
1875 rpsH_gene flipped: 66
1888 rpsH_gene flipped: 66
1889 rpsH_gene normal: 66
1890 rpsH_gene flipped: 23,70,119
1891 rpsH_gene flipped: 53,68,123
1894 rpsH_gene normal: 53,68,123
1895 rpsH_gene flipped: 6,93
π° Bump-2 1874-1875 with 3 candidates
1874 rpsH_gene normal: 23,70,119
π± Sticky-3 1886-1888 with 6 candidates
1886 rpsH_gene normal: 2,74,79
1887 rpsH_gene normal: 23,70,119
π Short stem 1876-1885 - 2-pair stem - open loops: πΈ Sticky loop 1878-1883 (6)
1876 rpsH_gene normal: 66
1877 rpsH_gene flipped: 23,70,119
1883 rpsH_gene normal: 62,112
1885 rpsH_gene flipped: 5,9,48,90,113
πΈ Sticky loop 1878-1883 (6) with 20 candidates
1878 rpsH_gene flipped: 2,74,79
1879 rpsH_gene symmetric: 91
1881 rpsH_gene flipped: 28,31,41,56,57,64
1882 rpsH_gene flipped: 4
1882 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
π Medium stem 1917-1935 - (6-pair stem - open loops: πΈ Sticky loop 1923-1929 (7)
1918 rpsH_gene flipped: 51,71,95,103,104,110
1919 rpsH_gene flipped: 13,15,77,88,114
1919 rpsH_gene normal: 127
1920 rpsH_gene flipped: 6,93
1921 rpsH_gene flipped: 25,78
1921 rpsH_gene normal: 81
1922 rpsH_gene normal: 18,67,76,118
1922 rpsH_gene flipped: 54
1929 rpsH_gene flipped: 25,78
1929 rpsH_gene normal: 81
1930 rpsH_gene flipped: 128
1932 rpsH_gene flipped: 23,70,119
1933 rpsH_gene symmetric: 80,84,117
1934 rpsH_gene normal: 23,70,119
1935 rpsH_gene flipped: 66
πΈ Sticky loop 1923-1929 (7) with 20 candidates
1923 rpsH_gene normal: 12,26,55,106
1923 rpsH_gene flipped: 66
1924 rpsH_gene flipped: 12,26,55,106
1924 rpsH_gene normal: 66
1925 rpsH_gene normal: 5,9,48,90,113
1927 rpsH_gene normal: 66
1928 rpsH_gene flipped: 28,57
1928 rpsH_gene normal: 29,30
π Medium stem 1956-1972 - (6-pair stem - open loops: πΈ Sticky five 1962-1966
1956 rpsH_gene normal: 12,26,55,106
1956 rpsH_gene flipped: 66
1957 rpsH_gene normal: 53,68,123
1958 rpsH_gene normal: 23,70,119
1959 rpsH_gene normal: 11,32,40,59,63,83,92,99
1959 rpsH_gene flipped: 25,78
1960 rpsH_gene flipped: 17,44,82,98,100,109,120,122
1960 rpsH_gene normal: 29,30
1961 rpsH_gene flipped: 12,26,55,106
1961 rpsH_gene normal: 66
1966 rpsH_gene flipped: 13,15,77,88,114
1966 rpsH_gene normal: 127
1967 rpsH_gene normal: 23,70,119
1968 rpsH_gene flipped: 66
1970 rpsH_gene normal: 128
1971 rpsH_gene normal: 25,78
1971 rpsH_gene flipped: 81
1972 rpsH_gene normal: 6,93
πΈ Sticky five 1962-1966 with 16 candidates
1962 rpsH_gene flipped: 18,67,76,118
1962 rpsH_gene normal: 54
1963 rpsH_gene flipped: 35,102,115
1964 rpsH_gene normal: 13,15,77,88,114
1964 rpsH_gene flipped: 127
1965 rpsH_gene symmetric: 34,39
π Medium stem 2034-2051 - (5-pair stem - open loops: πΈ Sticky loop 2039-2046 (8)
2034 rpsH_gene flipped: 35,102,115
2035 rpsH_gene normal: 13,15,77,88,114
2035 rpsH_gene flipped: 127
2036 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2036 rpsH_gene normal: 25,78
2037 rpsH_gene flipped: 62,112
2046 rpsH_gene symmetric: 80,84,117
2047 rpsH_gene flipped: 6,93
2048 rpsH_gene normal: 6,93
2049 rpsH_gene normal: 13,15,77,88,114
2049 rpsH_gene flipped: 127
2050 rpsH_gene normal: 51,71,95,103,104,110
2051 rpsH_gene normal: 66
πΈ Sticky loop 2039-2046 (8) with 29 candidates
2039 rpsH_gene symmetric: 105,107
2040 rpsH_gene flipped: 128
2041 rpsH_gene normal: 1,3,10,27,96,111
2041 rpsH_gene flipped: 72,129
2042 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2042 rpsH_gene normal: 29,30
2044 rpsH_gene normal: 53,68,123
2045 rpsH_gene symmetric: 8,20,24,97,116
βοΈ Belt 2054-2633 - (8-pair stem - open loops: π Bump-1 2062)
2054 rpsH_gene flipped: 13,15,77,88,114
2054 rpsH_gene normal: 127
2055 rpsH_gene flipped: 6,93
2056 rpsH_gene normal: 28,57
2056 rpsH_gene flipped: 29,30
2057 rpsH_gene flipped: 66
2059 rpsH_gene normal: 66
2060 rpsH_gene symmetric: 105,107
2061 rpsH_gene normal: 11,32,40,59,63,83,92,99
2061 rpsH_gene flipped: 25,78
2062 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2062 rpsH_gene normal: 29,30
π Short stem 2063-2636 - 3-pair stem - open loops: π Bump-1 2066, π° Bump-2 2624-2625
2065 rpsH_gene normal: 53,68,123
2066 rpsH_gene normal: 35,102,115
2625 rpsH_gene symmetric: 80,84,117
2626 rpsH_gene symmetric: 8,20,24,97,116
2627 rpsH_gene flipped: 2,74,79
2628 rpsH_gene flipped: 18,67,76,118
2628 rpsH_gene normal: 54
2629 rpsH_gene normal: 25,78
2629 rpsH_gene flipped: 81
2630 rpsH_gene normal: 28,57
2630 rpsH_gene flipped: 29,30
2632 rpsH_gene symmetric: 105,107
2633 rpsH_gene flipped: 66
π° Bump-2 2624-2625 with 2 candidates
2624 rpsH_gene normal: 6,93
π Short stem 2067-2623 - 2-pair stem - open loops: πΈ Sticky loop 2069-2074 (6), πΈ Sticky loop 2458-2463 (6), πΈ Sticky loop 2511-2517 (7), πΈ Sticky five 2594-2598, πΈ Sticky loop 2618-2621 (4)
2068 rpsH_gene normal: 62,112
2456 rpsH_gene flipped: 18,67,76,118
2456 rpsH_gene normal: 54
2457 rpsH_gene normal: 62,112
2463 rpsH_gene symmetric: 8,20,24,97,116
2517 rpsH_gene flipped: 1,3,10,27,96,111
2517 rpsH_gene normal: 72,129
2598 rpsH_gene symmetric: 105,107
2622 rpsH_gene normal: 25,78
2622 rpsH_gene flipped: 81
πΈ Sticky loop 2069-2074 (6) with 28 candidates
2069 rpsH_gene flipped: 66
2070 rpsH_gene flipped: 51,71,95,103,104,110
2071 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2071 rpsH_gene normal: 29,30
2072 rpsH_gene flipped: 12,26,55,106
2072 rpsH_gene normal: 66
2073 rpsH_gene flipped: 28,31,41,56,57,64
πΈ Sticky loop 2458-2463 (6) with 23 candidates
2459 rpsH_gene symmetric: 65,86
2460 rpsH_gene normal: 1,3,10,27,96,111
2460 rpsH_gene flipped: 72,129
2461 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2461 rpsH_gene normal: 29,30
2462 rpsH_gene normal: 53,68,123
πΈ Sticky loop 2511-2517 (7) with 15 candidates
2512 rpsH_gene flipped: 1,3,10,27,96,111
2512 rpsH_gene normal: 72,129
2513 rpsH_gene flipped: 5,9,48,90,113
2515 rpsH_gene symmetric: 34,39
πΈ Sticky five 2594-2598 with 5 candidates
2594 rpsH_gene normal: 35,102,115
2596 rpsH_gene normal: 62,112
πΈ Sticky loop 2618-2621 (4) with 9 candidates
2618 rpsH_gene flipped: 53,68,123
2619 rpsH_gene normal: 53,68,123
2620 rpsH_gene normal: 35,102,115
π Medium stem 2075-2455 - (4-pair stem - open loops: π Bump-1 2079
2076 rpsH_gene normal: 1,3,10,27,96,111
2076 rpsH_gene flipped: 72,129
2078 rpsH_gene normal: 5,9,48,90,113
βοΈ Belt 2080-2457 - (7-pair stem - open loops: π Bump-1 2087, π° Bump-2 2255-2256, π° Bump-2 2293-2294, πΈ Sticky loop 2396-2405 (10), π Sticky hub 2433-2444 (12), π° Bump-2 2450-2451)
2080 rpsH_gene symmetric: 65,86
2082 rpsH_gene flipped: 23,70,119
2083 rpsH_gene flipped: 2,74,79
2084 rpsH_gene flipped: 28,31,41,56,57,64
2085 rpsH_gene flipped: 4
2085 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2086 rpsH_gene normal: 62,112
2087 rpsH_gene normal: 11,32,40,59,63,83,92,99
2087 rpsH_gene flipped: 25,78
2256 rpsH_gene normal: 18,67,76,118
2256 rpsH_gene flipped: 54
2294 rpsH_gene flipped: 2,74,79
2405 rpsH_gene flipped: 66
2446 rpsH_gene normal: 28,57
2446 rpsH_gene flipped: 29,30
2448 rpsH_gene symmetric: 65,86
2452 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2452 rpsH_gene normal: 25,78
2453 rpsH_gene flipped: 28,57
2453 rpsH_gene normal: 29,30
2454 rpsH_gene normal: 6,93
2455 rpsH_gene flipped: 2,74,79
π° Bump-2 2255-2256 with 3 candidates
2255 rpsH_gene flipped: 25,78
2255 rpsH_gene normal: 81
π° Bump-2 2293-2294 with 2 candidates
2293 rpsH_gene normal: 6,93
πΈ Sticky loop 2396-2405 (10) with 32 candidates
2396 rpsH_gene flipped: 25,78
2396 rpsH_gene normal: 81
2398 rpsH_gene normal: 25,78
2398 rpsH_gene flipped: 81
2399 rpsH_gene flipped: 25,78
2399 rpsH_gene normal: 81
2400 rpsH_gene normal: 4
2400 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2401 rpsH_gene normal: 28,31,41,56,57,64
2403 rpsH_gene flipped: 18,67,76,118
2403 rpsH_gene normal: 54
2404 rpsH_gene normal: 62,112
π Sticky hub 2433-2444 (12) with 28 candidates
2434 rpsH_gene normal: 66
2435 rpsH_gene flipped: 28,57
2435 rpsH_gene normal: 29,30
2436 rpsH_gene flipped: 25,78
2436 rpsH_gene normal: 81
2437 rpsH_gene flipped: 128
2438 rpsH_gene normal: 1,3,10,27,96,111
2438 rpsH_gene flipped: 72,129
2440 rpsH_gene symmetric: 91
2441 rpsH_gene normal: 12,26,55,106
2441 rpsH_gene flipped: 66
2442 rpsH_gene normal: 53,68,123
2443 rpsH_gene flipped: 6,93
π° Bump-2 2450-2451 with 6 candidates
2450 rpsH_gene flipped: 51,71,95,103,104,110
βοΈ Belt 2088-2254 - (14-pair stem - open loops: π° Bump-2 2102-2103, π± Sticky-3 2208-2210, πΈ Sticky five 2235-2239, π Bump-1 2249)
2089 rpsH_gene symmetric: 34,39
2091 rpsH_gene flipped: 18,67,76,118
2091 rpsH_gene normal: 54
2092 rpsH_gene normal: 62,112
2093 rpsH_gene flipped: 66
2094 rpsH_gene flipped: 51,71,95,103,104,110
2096 rpsH_gene flipped: 1,3,10,27,96,111
2096 rpsH_gene normal: 72,129
2098 rpsH_gene flipped: 4
2098 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2099 rpsH_gene normal: 62,112
2101 rpsH_gene flipped: 23,70,119
2103 rpsH_gene flipped: 12,26,55,106
2103 rpsH_gene normal: 66
2203 rpsH_gene normal: 62,112
2204 rpsH_gene normal: 11,32,40,59,63,83,92,99
2204 rpsH_gene flipped: 25,78
2205 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2205 rpsH_gene normal: 29,30
2207 rpsH_gene normal: 53,68,123
2229 rpsH_gene symmetric: 105,107
2230 rpsH_gene normal: 18,67,76,118
2230 rpsH_gene flipped: 54
2232 rpsH_gene flipped: 18,67,76,118
2232 rpsH_gene normal: 54
2233 rpsH_gene normal: 25,78
2233 rpsH_gene flipped: 81
2234 rpsH_gene flipped: 25,78
2234 rpsH_gene normal: 81
2239 rpsH_gene flipped: 128
2241 rpsH_gene flipped: 62,112
2242 rpsH_gene normal: 4
2242 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2244 rpsH_gene flipped: 4
2244 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2245 rpsH_gene normal: 62,112
2246 rpsH_gene normal: 11,32,40,59,63,83,92,99
2246 rpsH_gene flipped: 25,78
2248 rpsH_gene flipped: 18,67,76,118
2248 rpsH_gene normal: 54
2249 rpsH_gene normal: 25,78
2249 rpsH_gene flipped: 81
2252 rpsH_gene normal: 6,93
2253 rpsH_gene symmetric: 80,84,117
2254 rpsH_gene flipped: 6,93
π° Bump-2 2102-2103 with 3 candidates
2102 rpsH_gene flipped: 53,68,123
π± Sticky-3 2208-2210 with 4 candidates
2208 rpsH_gene normal: 35,102,115
2209 rpsH_gene flipped: 128
πΈ Sticky five 2235-2239 with 6 candidates
2236 rpsH_gene normal: 25,78
2236 rpsH_gene flipped: 81
2238 rpsH_gene flipped: 25,78
2238 rpsH_gene normal: 81
βοΈ Belt 2104-2202 - (18-pair stem - open loops: πΈ Sticky loop 2122-2130 (9))
2104 rpsH_gene flipped: 28,31,41,56,57,64
2105 rpsH_gene flipped: 4
2105 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2106 rpsH_gene normal: 62,112
2108 rpsH_gene normal: 128
2109 rpsH_gene symmetric: 105,107
2111 rpsH_gene symmetric: 105,107
2112 rpsH_gene flipped: 128
2114 rpsH_gene flipped: 28,57
2114 rpsH_gene normal: 29,30
2115 rpsH_gene normal: 28,57
2115 rpsH_gene flipped: 29,30
2117 rpsH_gene symmetric: 65,86
2119 rpsH_gene flipped: 28,57
2119 rpsH_gene normal: 29,30
2120 rpsH_gene flipped: 25,78
2120 rpsH_gene normal: 81
πΈ Sticky loop 2122-2130 (9) with 22 candidates
2122 rpsH_gene normal: 25,78
2122 rpsH_gene flipped: 81
2124 rpsH_gene normal: 28,57
2124 rpsH_gene flipped: 29,30
2126 rpsH_gene flipped: 28,57
2126 rpsH_gene normal: 29,30
2127 rpsH_gene normal: 6,93
2128 rpsH_gene flipped: 2,74,79
2129 rpsH_gene flipped: 28,31,41,56,57,64
π Medium stem 2131-2207 - (5-pair stem - open loops: π° Bump-2 2136-2137, π Sticky hub 2173-2184 (12)
2131 rpsH_gene flipped: 4
2131 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2132 rpsH_gene normal: 62,112
2133 rpsH_gene flipped: 66
2134 rpsH_gene normal: 66
2135 rpsH_gene flipped: 62,112
2137 rpsH_gene symmetric: 105,107
2184 rpsH_gene normal: 128
2185 rpsH_gene symmetric: 105,107
2186 rpsH_gene normal: 4
2186 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2188 rpsH_gene flipped: 4
2188 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2189 rpsH_gene normal: 62,112
2191 rpsH_gene normal: 128
2192 rpsH_gene symmetric: 105,107
2193 rpsH_gene normal: 4
2193 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2194 rpsH_gene normal: 28,31,41,56,57,64
2196 rpsH_gene normal: 5,9,48,90,113
2198 rpsH_gene flipped: 51,71,95,103,104,110
2199 rpsH_gene flipped: 13,15,77,88,114
2199 rpsH_gene normal: 127
2200 rpsH_gene normal: 35,102,115
2201 rpsH_gene normal: 4
2201 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2202 rpsH_gene flipped: 4
2202 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
π Sticky hub 2173-2184 (12) with 43 candidates
2173 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2173 rpsH_gene normal: 29,30
2174 rpsH_gene normal: 17,44,82,98,100,109,120,122
2174 rpsH_gene flipped: 29,30
2175 rpsH_gene symmetric: 34,39
2176 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2176 rpsH_gene normal: 29,30
2178 rpsH_gene flipped: 12,26,55,106
2178 rpsH_gene normal: 66
2179 rpsH_gene flipped: 28,31,41,56,57,64
π Short stem 2138-2172 - 3-pair stem - open loops: πΈ Sticky loop 2141-2146 (6), π± Sticky-3 2167-2169
2139 rpsH_gene normal: 25,78
2139 rpsH_gene flipped: 81
2140 rpsH_gene normal: 28,57
2140 rpsH_gene flipped: 29,30
2146 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2146 rpsH_gene normal: 25,78
2171 rpsH_gene symmetric: 65,86
2172 rpsH_gene normal: 1,3,10,27,96,111
2172 rpsH_gene flipped: 72,129
πΈ Sticky loop 2141-2146 (6) with 34 candidates
2141 rpsH_gene normal: 11,32,40,59,63,83,92,99
2141 rpsH_gene flipped: 25,78
2142 rpsH_gene flipped: 13,15,77,88,114
2142 rpsH_gene normal: 127
2143 rpsH_gene symmetric: 8,20,24,97,116
2144 rpsH_gene flipped: 53,68,123
2145 rpsH_gene normal: 17,44,82,98,100,109,120,122
2145 rpsH_gene flipped: 29,30
π± Sticky-3 2167-2169 with 3 candidates
2167 rpsH_gene normal: 62,112
2168 rpsH_gene flipped: 66
βοΈ Belt 2147-2166 - (8-pair stem - open loops: πΈ Sticky loop 2155-2158 (4))
2147 rpsH_gene flipped: 62,112
2148 rpsH_gene normal: 18,67,76,118
2148 rpsH_gene flipped: 54
2150 rpsH_gene flipped: 18,67,76,118
2150 rpsH_gene normal: 54
2151 rpsH_gene flipped: 35,102,115
2152 rpsH_gene normal: 13,15,77,88,114
2152 rpsH_gene flipped: 127
2153 rpsH_gene flipped: 1,3,10,27,96,111
2153 rpsH_gene normal: 72,129
2154 rpsH_gene normal: 128
2158 rpsH_gene flipped: 23,70,119
2159 rpsH_gene flipped: 53,68,123
2160 rpsH_gene normal: 53,68,123
2161 rpsH_gene normal: 23,70,119
2162 rpsH_gene normal: 11,32,40,59,63,83,92,99
2162 rpsH_gene flipped: 25,78
2163 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2163 rpsH_gene normal: 29,30
2164 rpsH_gene flipped: 12,26,55,106
2164 rpsH_gene normal: 66
2165 rpsH_gene flipped: 28,31,41,56,57,64
2166 rpsH_gene flipped: 4
2166 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
πΈ Sticky loop 2155-2158 (4) with 7 candidates
2155 rpsH_gene normal: 25,78
2155 rpsH_gene flipped: 81
2156 rpsH_gene normal: 28,57
2156 rpsH_gene flipped: 29,30
π Short stem 2211-2228 - 3-pair stem - open loops: π Bump-1 2214
2212 rpsH_gene flipped: 5,9,48,90,113
2213 rpsH_gene normal: 12,26,55,106
2213 rpsH_gene flipped: 66
2214 rpsH_gene normal: 53,68,123
π Medium stem 2215-2234 - (6-pair stem - open loops: πΈ Sticky five 2221-2225
2215 rpsH_gene flipped: 6,93
2217 rpsH_gene flipped: 25,78
2217 rpsH_gene normal: 81
2218 rpsH_gene normal: 4
2218 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2219 rpsH_gene flipped: 4
2219 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2220 rpsH_gene flipped: 35,102,115
2226 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2226 rpsH_gene normal: 25,78
2227 rpsH_gene flipped: 62,112
πΈ Sticky five 2221-2225 with 19 candidates
2221 rpsH_gene symmetric: 80,84,117
2222 rpsH_gene flipped: 6,93
2223 rpsH_gene normal: 28,57
2223 rpsH_gene flipped: 29,30
2224 rpsH_gene normal: 11,32,40,59,63,83,92,99
2224 rpsH_gene flipped: 25,78
π Medium stem 2257-2269 - (5-pair stem - open loops: π± Sticky-3 2262-2264
2258 rpsH_gene symmetric: 91
2259 rpsH_gene normal: 12,26,55,106
2259 rpsH_gene flipped: 66
2260 rpsH_gene flipped: 12,26,55,106
2260 rpsH_gene normal: 66
2261 rpsH_gene symmetric: 91
2264 rpsH_gene normal: 5,9,48,90,113
2267 rpsH_gene normal: 66
2268 rpsH_gene symmetric: 105,107
π± Sticky-3 2262-2264 with 10 candidates
2262 rpsH_gene normal: 12,26,55,106
2262 rpsH_gene flipped: 66
2263 rpsH_gene flipped: 12,26,55,106
2263 rpsH_gene normal: 66
π Medium stem 2270-2292 - (6-pair stem - open loops: π Sticky hub 2276-2286 (11)
2270 rpsH_gene flipped: 62,112
2271 rpsH_gene flipped: 128
2273 rpsH_gene flipped: 51,71,95,103,104,110
2274 rpsH_gene flipped: 13,15,77,88,114
2274 rpsH_gene normal: 127
2275 rpsH_gene flipped: 6,93
2286 rpsH_gene flipped: 66
2287 rpsH_gene normal: 66
2288 rpsH_gene flipped: 28,57
2288 rpsH_gene normal: 29,30
2289 rpsH_gene flipped: 25,78
2289 rpsH_gene normal: 81
2290 rpsH_gene normal: 4
2290 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2291 rpsH_gene flipped: 4
2291 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2292 rpsH_gene normal: 25,78
2292 rpsH_gene flipped: 81
π Sticky hub 2276-2286 (11) with 32 candidates
2276 rpsH_gene normal: 28,57
2276 rpsH_gene flipped: 29,30
2278 rpsH_gene flipped: 28,57
2278 rpsH_gene normal: 29,30
2279 rpsH_gene normal: 28,57
2279 rpsH_gene flipped: 29,30
2281 rpsH_gene flipped: 23,70,119
2282 rpsH_gene normal: 13,15,77,88,114
2282 rpsH_gene flipped: 127
2283 rpsH_gene symmetric: 34,39
2284 rpsH_gene flipped: 13,15,77,88,114
2284 rpsH_gene normal: 127
2285 rpsH_gene normal: 23,70,119
π Short stem 2295-2395 - 2-pair stem - open loops: π° Bump-2 2297-2298, π° Bump-2 2356-2357, π Bump-1 2382, π Bump-1 2393
2295 rpsH_gene normal: 5,9,48,90,113
2298 rpsH_gene flipped: 5,9,48,90,113
2357 rpsH_gene normal: 11,32,40,59,63,83,92,99
2357 rpsH_gene flipped: 25,78
2382 rpsH_gene flipped: 25,78
2382 rpsH_gene normal: 81
2393 rpsH_gene normal: 12,26,55,106
2393 rpsH_gene flipped: 66
2394 rpsH_gene normal: 53,68,123
2395 rpsH_gene flipped: 6,93
π° Bump-2 2356-2357 with 2 candidates
2356 rpsH_gene normal: 62,112
βοΈ Belt 2299-2355 - (10-pair stem - open loops: π Bump-1 2309, π± Sticky-3 2329-2331, π Sticky hub 2334-2347 (14))
2299 rpsH_gene normal: 12,26,55,106
2299 rpsH_gene flipped: 66
2300 rpsH_gene flipped: 12,26,55,106
2300 rpsH_gene normal: 66
2301 rpsH_gene flipped: 18,67,76,118
2301 rpsH_gene normal: 54
2302 rpsH_gene normal: 25,78
2302 rpsH_gene flipped: 81
2303 rpsH_gene flipped: 25,78
2303 rpsH_gene normal: 81
2304 rpsH_gene normal: 18,67,76,118
2304 rpsH_gene flipped: 54
2305 rpsH_gene normal: 2,74,79
2306 rpsH_gene flipped: 6,93
2307 rpsH_gene normal: 28,57
2307 rpsH_gene flipped: 29,30
2308 rpsH_gene normal: 11,32,40,59,63,83,92,99
2308 rpsH_gene flipped: 25,78
2331 rpsH_gene normal: 13,15,77,88,114
2331 rpsH_gene flipped: 127
2332 rpsH_gene flipped: 1,3,10,27,96,111
2332 rpsH_gene normal: 72,129
2333 rpsH_gene symmetric: 65,86
2347 rpsH_gene flipped: 18,67,76,118
2347 rpsH_gene normal: 54
2348 rpsH_gene flipped: 35,102,115
2349 rpsH_gene symmetric: 80,84,117
2350 rpsH_gene normal: 23,70,119
2352 rpsH_gene flipped: 23,70,119
2353 rpsH_gene symmetric: 80,84,117
2354 rpsH_gene normal: 35,102,115
π± Sticky-3 2329-2331 with 5 candidates
2329 rpsH_gene normal: 25,78
2329 rpsH_gene flipped: 81
2330 rpsH_gene normal: 6,93
π Sticky hub 2334-2347 (14) with 61 candidates
2335 rpsH_gene normal: 66
2336 rpsH_gene flipped: 23,70,119
2337 rpsH_gene flipped: 53,68,123
2338 rpsH_gene normal: 17,44,82,98,100,109,120,122
2338 rpsH_gene flipped: 29,30
2339 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2339 rpsH_gene normal: 25,78
2340 rpsH_gene flipped: 23,70,119
2341 rpsH_gene flipped: 2,74,79
2342 rpsH_gene flipped: 28,31,41,56,57,64
2343 rpsH_gene flipped: 4
2343 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2344 rpsH_gene normal: 62,112
2345 rpsH_gene normal: 11,32,40,59,63,83,92,99
2345 rpsH_gene flipped: 25,78
π Medium stem 2310-2328 - (6-pair stem - open loops: πΈ Sticky loop 2316-2322 (7)
2310 rpsH_gene flipped: 1,3,10,27,96,111
2310 rpsH_gene normal: 72,129
2311 rpsH_gene flipped: 5,9,48,90,113
2313 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2313 rpsH_gene normal: 25,78
2314 rpsH_gene flipped: 28,57
2314 rpsH_gene normal: 29,30
2315 rpsH_gene normal: 28,57
2315 rpsH_gene flipped: 29,30
2322 rpsH_gene flipped: 62,112
2324 rpsH_gene flipped: 35,102,115
2325 rpsH_gene normal: 13,15,77,88,114
2325 rpsH_gene flipped: 127
2326 rpsH_gene normal: 51,71,95,103,104,110
2328 rpsH_gene normal: 128
πΈ Sticky loop 2316-2322 (7) with 17 candidates
2317 rpsH_gene flipped: 28,57
2317 rpsH_gene normal: 29,30
2318 rpsH_gene flipped: 25,78
2318 rpsH_gene normal: 81
2319 rpsH_gene normal: 4
2319 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
βοΈ Belt 2358-2381 - (9-pair stem - open loops: πΈ Sticky loop 2367-2372 (6))
2358 rpsH_gene flipped: 13,15,77,88,114
2358 rpsH_gene normal: 127
2359 rpsH_gene flipped: 6,93
2360 rpsH_gene normal: 6,93
2361 rpsH_gene symmetric: 80,84,117
2362 rpsH_gene symmetric: 8,20,24,97,116
2363 rpsH_gene symmetric: 80,84,117
2364 rpsH_gene normal: 23,70,119
2366 rpsH_gene flipped: 23,70,119
2372 rpsH_gene flipped: 35,102,115
2373 rpsH_gene symmetric: 80,84,117
2374 rpsH_gene normal: 23,70,119
2375 rpsH_gene flipped: 66
2377 rpsH_gene normal: 66
2378 rpsH_gene flipped: 23,70,119
2379 rpsH_gene normal: 13,15,77,88,114
2379 rpsH_gene flipped: 127
2380 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2380 rpsH_gene normal: 25,78
2381 rpsH_gene flipped: 28,57
2381 rpsH_gene normal: 29,30
πΈ Sticky loop 2367-2372 (6) with 23 candidates
2367 rpsH_gene normal: 13,15,77,88,114
2367 rpsH_gene flipped: 127
2368 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2368 rpsH_gene normal: 25,78
2369 rpsH_gene flipped: 28,57
2369 rpsH_gene normal: 29,30
2370 rpsH_gene flipped: 25,78
2370 rpsH_gene normal: 81
π Short stem 2383-2392 - 3-pair stem - open loops: πΈ Sticky loop 2386-2389 (4)
2383 rpsH_gene normal: 18,67,76,118
2383 rpsH_gene flipped: 54
2385 rpsH_gene flipped: 1,3,10,27,96,111
2385 rpsH_gene normal: 72,129
2390 rpsH_gene normal: 62,112
2392 rpsH_gene flipped: 5,9,48,90,113
πΈ Sticky loop 2386-2389 (4) with 4 candidates
2386 rpsH_gene symmetric: 65,86
2388 rpsH_gene flipped: 62,112
βοΈ Belt 2406-2430 - (7-pair stem - open loops: π Bump-1 2413)
2407 rpsH_gene normal: 128
2408 rpsH_gene normal: 25,78
2408 rpsH_gene flipped: 81
2409 rpsH_gene normal: 28,57
2409 rpsH_gene flipped: 29,30
2410 rpsH_gene flipped: 66
2411 rpsH_gene normal: 66
2412 rpsH_gene flipped: 28,57
2412 rpsH_gene normal: 29,30
π Short stem 2414-2432 - 2-pair stem - open loops: πΈ Sticky loop 2416-2423 (8)
2414 rpsH_gene normal: 6,93
2415 rpsH_gene flipped: 53,68,123
2424 rpsH_gene normal: 51,71,95,103,104,110
2425 rpsH_gene flipped: 51,71,95,103,104,110
2426 rpsH_gene flipped: 13,15,77,88,114
2426 rpsH_gene normal: 127
2427 rpsH_gene flipped: 6,93
2428 rpsH_gene normal: 28,57
2428 rpsH_gene flipped: 29,30
2430 rpsH_gene symmetric: 65,86
πΈ Sticky loop 2416-2423 (8) with 35 candidates
2416 rpsH_gene normal: 17,44,82,98,100,109,120,122
2416 rpsH_gene flipped: 29,30
2417 rpsH_gene flipped: 1,3,10,27,96,111
2417 rpsH_gene normal: 72,129
2418 rpsH_gene flipped: 5,9,48,90,113
2419 rpsH_gene normal: 2,74,79
2420 rpsH_gene symmetric: 8,20,24,97,116
2421 rpsH_gene flipped: 2,74,79
2422 rpsH_gene symmetric: 91
π Medium stem 2464-2510 - (5-pair stem - open loops: π Bump-1 2469, π° Bump-2 2503-2504, π Bump-1 2508
2464 rpsH_gene flipped: 53,68,123
2466 rpsH_gene normal: 17,44,82,98,100,109,120,122
2466 rpsH_gene flipped: 29,30
2467 rpsH_gene normal: 51,71,95,103,104,110
2468 rpsH_gene normal: 66
2469 rpsH_gene symmetric: 105,107
2504 rpsH_gene symmetric: 105,107
2505 rpsH_gene normal: 18,67,76,118
2505 rpsH_gene flipped: 54
2506 rpsH_gene normal: 2,74,79
2507 rpsH_gene flipped: 6,93
2508 rpsH_gene normal: 6,93
2509 rpsH_gene flipped: 2,74,79
2510 rpsH_gene symmetric: 91
π° Bump-2 2503-2504 with 1 candidates
2503 rpsH_gene normal: 128
βοΈ Belt 2470-2502 - (8-pair stem - open loops: π± Sticky-3 2478-2480, π± Sticky-3 2492-2494)
2471 rpsH_gene flipped: 62,112
2472 rpsH_gene normal: 4
2472 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2473 rpsH_gene normal: 28,31,41,56,57,64
2475 rpsH_gene flipped: 1,3,10,27,96,111
2475 rpsH_gene normal: 72,129
2476 rpsH_gene symmetric: 65,86
2480 rpsH_gene normal: 23,70,119
2494 rpsH_gene normal: 6,93
2495 rpsH_gene normal: 13,15,77,88,114
2495 rpsH_gene flipped: 127
2496 rpsH_gene symmetric: 34,39
2497 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2497 rpsH_gene normal: 29,30
2498 rpsH_gene flipped: 12,26,55,106
2498 rpsH_gene normal: 66
2499 rpsH_gene symmetric: 91
2500 rpsH_gene normal: 2,74,79
2501 rpsH_gene normal: 23,70,119
π± Sticky-3 2478-2480 with 8 candidates
2478 rpsH_gene flipped: 5,9,48,90,113
2479 rpsH_gene normal: 2,74,79
π± Sticky-3 2492-2494 with 13 candidates
2492 rpsH_gene flipped: 4
2492 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2493 rpsH_gene normal: 25,78
2493 rpsH_gene flipped: 81
π Short stem 2481-2491 - 2-pair stem - open loops: πΈ Sticky loop 2483-2489 (7)
2481 rpsH_gene normal: 11,32,40,59,63,83,92,99
2481 rpsH_gene flipped: 25,78
2482 rpsH_gene flipped: 13,15,77,88,114
2482 rpsH_gene normal: 127
2489 rpsH_gene symmetric: 105,107
2490 rpsH_gene normal: 4
2490 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
πΈ Sticky loop 2483-2489 (7) with 12 candidates
2483 rpsH_gene flipped: 6,93
2484 rpsH_gene normal: 6,93
2485 rpsH_gene symmetric: 80,84,117
2486 rpsH_gene flipped: 6,93
2487 rpsH_gene flipped: 25,78
2487 rpsH_gene normal: 81
βοΈ Belt 2518-2593 - (11-pair stem - open loops: π° Bump-2 2529-2530, π Bump-1 2557, πΈ Sticky five 2573-2577, π° Bump-2 2583-2584, π° Bump-2 2586-2587, π Bump-1 2592)
2518 rpsH_gene flipped: 5,9,48,90,113
2519 rpsH_gene normal: 12,26,55,106
2519 rpsH_gene flipped: 66
2520 rpsH_gene flipped: 12,26,55,106
2520 rpsH_gene normal: 66
2521 rpsH_gene flipped: 18,67,76,118
2521 rpsH_gene normal: 54
2522 rpsH_gene normal: 25,78
2522 rpsH_gene flipped: 81
2525 rpsH_gene normal: 6,93
2526 rpsH_gene flipped: 2,74,79
2527 rpsH_gene flipped: 18,67,76,118
2527 rpsH_gene normal: 54
2528 rpsH_gene normal: 62,112
2530 rpsH_gene normal: 66
2557 rpsH_gene flipped: 53,68,123
2577 rpsH_gene flipped: 23,70,119
2578 rpsH_gene flipped: 2,74,79
2579 rpsH_gene flipped: 18,67,76,118
2579 rpsH_gene normal: 54
2580 rpsH_gene normal: 25,78
2580 rpsH_gene flipped: 81
2582 rpsH_gene flipped: 25,78
2582 rpsH_gene normal: 81
2587 rpsH_gene symmetric: 105,107
2588 rpsH_gene flipped: 66
2589 rpsH_gene flipped: 51,71,95,103,104,110
2590 rpsH_gene flipped: 13,15,77,88,114
2590 rpsH_gene normal: 127
2591 rpsH_gene normal: 35,102,115
2592 rpsH_gene normal: 18,67,76,118
2592 rpsH_gene flipped: 54
2593 rpsH_gene normal: 2,74,79
π° Bump-2 2529-2530 with 1 candidates
2529 rpsH_gene flipped: 66
πΈ Sticky five 2573-2577 with 11 candidates
2573 rpsH_gene symmetric: 8,20,24,97,116
2574 rpsH_gene symmetric: 80,84,117
2575 rpsH_gene normal: 23,70,119
π° Bump-2 2583-2584 with 10 candidates
2583 rpsH_gene normal: 4
2583 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
βοΈ Belt 2531-2556 - (10-pair stem - open loops: πΈ Sticky loop 2541-2544 (4), π° Bump-2 2553-2554)
2531 rpsH_gene flipped: 62,112
2532 rpsH_gene flipped: 128
2534 rpsH_gene flipped: 28,57
2534 rpsH_gene normal: 29,30
2535 rpsH_gene flipped: 25,78
2535 rpsH_gene normal: 81
2536 rpsH_gene normal: 18,67,76,118
2536 rpsH_gene flipped: 54
2537 rpsH_gene normal: 12,26,55,106
2537 rpsH_gene flipped: 66
2539 rpsH_gene normal: 17,44,82,98,100,109,120,122
2539 rpsH_gene flipped: 29,30
2540 rpsH_gene normal: 51,71,95,103,104,110
2544 rpsH_gene flipped: 25,78
2544 rpsH_gene normal: 81
2545 rpsH_gene flipped: 128
2547 rpsH_gene normal: 128
2548 rpsH_gene normal: 25,78
2548 rpsH_gene flipped: 81
2549 rpsH_gene normal: 6,93
2550 rpsH_gene flipped: 2,74,79
2551 rpsH_gene flipped: 18,67,76,118
2551 rpsH_gene normal: 54
2552 rpsH_gene symmetric: 105,107
2554 rpsH_gene normal: 28,31,41,56,57,64
2555 rpsH_gene normal: 2,74,79
2556 rpsH_gene symmetric: 8,20,24,97,116
πΈ Sticky loop 2541-2544 (4) with 5 candidates
2541 rpsH_gene normal: 66
2542 rpsH_gene flipped: 28,57
2542 rpsH_gene normal: 29,30
π° Bump-2 2553-2554 with 10 candidates
2553 rpsH_gene normal: 4
2553 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
π Medium stem 2558-2572 - (5-pair stem - open loops: πΈ Sticky five 2563-2567
2558 rpsH_gene normal: 17,44,82,98,100,109,120,122
2558 rpsH_gene flipped: 29,30
2559 rpsH_gene flipped: 1,3,10,27,96,111
2559 rpsH_gene normal: 72,129
2568 rpsH_gene normal: 25,78
2568 rpsH_gene flipped: 81
2569 rpsH_gene flipped: 25,78
2569 rpsH_gene normal: 81
2570 rpsH_gene flipped: 128
2571 rpsH_gene normal: 1,3,10,27,96,111
2571 rpsH_gene flipped: 72,129
2572 rpsH_gene flipped: 13,15,77,88,114
2572 rpsH_gene normal: 127
πΈ Sticky five 2563-2567 with 3 candidates
2565 rpsH_gene normal: 66
2566 rpsH_gene flipped: 62,112
βοΈ Belt 2599-2617 - (7-pair stem - open loops: πΈ Sticky loop 2606-2609 (4), π Bump-1 2613)
2599 rpsH_gene normal: 11,32,40,59,63,83,92,99
2599 rpsH_gene flipped: 25,78
2601 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2601 rpsH_gene normal: 25,78
2602 rpsH_gene flipped: 62,112
2603 rpsH_gene normal: 4
2603 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2604 rpsH_gene normal: 28,31,41,56,57,64
2605 rpsH_gene normal: 2,74,79
2609 rpsH_gene normal: 12,26,55,106
2609 rpsH_gene flipped: 66
2611 rpsH_gene flipped: 12,26,55,106
2611 rpsH_gene normal: 66
2612 rpsH_gene normal: 5,9,48,90,113
2614 rpsH_gene flipped: 5,9,48,90,113
2616 rpsH_gene flipped: 18,67,76,118
2616 rpsH_gene normal: 54
2617 rpsH_gene flipped: 35,102,115
πΈ Sticky loop 2606-2609 (4) with 10 candidates
2606 rpsH_gene flipped: 6,93
2607 rpsH_gene flipped: 25,78
2607 rpsH_gene normal: 81
2608 rpsH_gene normal: 18,67,76,118
2608 rpsH_gene flipped: 54
βοΈ Belt 2641-2799 - (8-pair stem - open loops: π° Bump-2 2649-2650, πΈ Sticky loop 2786-2791 (6))
2644 rpsH_gene normal: 6,93
2645 rpsH_gene flipped: 2,74,79
2646 rpsH_gene flipped: 18,67,76,118
2646 rpsH_gene normal: 54
2647 rpsH_gene flipped: 35,102,115
2648 rpsH_gene flipped: 2,74,79
2650 rpsH_gene normal: 12,26,55,106
2650 rpsH_gene flipped: 66
2791 rpsH_gene normal: 11,32,40,59,63,83,92,99
2791 rpsH_gene flipped: 25,78
2792 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2792 rpsH_gene normal: 29,30
2794 rpsH_gene flipped: 12,26,55,106
2794 rpsH_gene normal: 66
2795 rpsH_gene flipped: 28,31,41,56,57,64
2799 rpsH_gene normal: 66
π° Bump-2 2649-2650 with 1 candidates
2649 rpsH_gene symmetric: 91
πΈ Sticky loop 2786-2791 (6) with 17 candidates
2786 rpsH_gene normal: 12,26,55,106
2786 rpsH_gene flipped: 66
2788 rpsH_gene flipped: 12,26,55,106
2788 rpsH_gene normal: 66
2789 rpsH_gene flipped: 18,67,76,118
2789 rpsH_gene normal: 54
2790 rpsH_gene normal: 62,112
π Medium stem 2651-2785 - (4-pair stem - open loops: π° Bump-2 2655-2656, π° Bump-2 2744-2745, π Bump-1 2781
2651 rpsH_gene flipped: 12,26,55,106
2651 rpsH_gene normal: 66
2652 rpsH_gene normal: 5,9,48,90,113
2654 rpsH_gene flipped: 62,112
2656 rpsH_gene normal: 1,3,10,27,96,111
2656 rpsH_gene flipped: 72,129
2745 rpsH_gene flipped: 18,67,76,118
2745 rpsH_gene normal: 54
2781 rpsH_gene flipped: 62,112
2782 rpsH_gene normal: 4
2782 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2783 rpsH_gene normal: 28,31,41,56,57,64
2785 rpsH_gene symmetric: 91
π° Bump-2 2655-2656 with 1 candidates
2655 rpsH_gene flipped: 128
π° Bump-2 2744-2745 with 3 candidates
2744 rpsH_gene flipped: 2,74,79
βοΈ Belt 2657-2685 - (7-pair stem - open loops: π± Sticky-3 2664-2666, π° Bump-2 2677-2678)
2657 rpsH_gene flipped: 13,15,77,88,114
2657 rpsH_gene normal: 127
2658 rpsH_gene normal: 23,70,119
2660 rpsH_gene symmetric: 105,107
2662 rpsH_gene flipped: 28,57
2662 rpsH_gene normal: 29,30
2663 rpsH_gene normal: 28,57
2663 rpsH_gene flipped: 29,30
2666 rpsH_gene normal: 53,68,123
2678 rpsH_gene flipped: 1,3,10,27,96,111
2678 rpsH_gene normal: 72,129
2679 rpsH_gene flipped: 5,9,48,90,113
2681 rpsH_gene symmetric: 34,39
2683 rpsH_gene flipped: 18,67,76,118
2683 rpsH_gene normal: 54
2684 rpsH_gene normal: 25,78
2684 rpsH_gene flipped: 81
2685 rpsH_gene flipped: 25,78
2685 rpsH_gene normal: 81
π± Sticky-3 2664-2666 with 20 candidates
2664 rpsH_gene normal: 11,32,40,59,63,83,92,99
2664 rpsH_gene flipped: 25,78
2665 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2665 rpsH_gene normal: 29,30
π° Bump-2 2677-2678 with 6 candidates
2677 rpsH_gene normal: 13,15,77,88,114
2677 rpsH_gene flipped: 127
π Short stem 2667-2676 - 3-pair stem - open loops: πΈ Sticky loop 2670-2673 (4)
2667 rpsH_gene flipped: 6,93
2668 rpsH_gene normal: 28,57
2668 rpsH_gene flipped: 29,30
2673 rpsH_gene normal: 28,57
2673 rpsH_gene flipped: 29,30
2674 rpsH_gene normal: 11,32,40,59,63,83,92,99
2674 rpsH_gene flipped: 25,78
2675 rpsH_gene flipped: 13,15,77,88,114
2675 rpsH_gene normal: 127
2676 rpsH_gene symmetric: 8,20,24,97,116
πΈ Sticky loop 2670-2673 (4) with 5 candidates
2670 rpsH_gene flipped: 62,112
2672 rpsH_gene normal: 25,78
2672 rpsH_gene flipped: 81
π Medium stem 2686-2743 - (6-pair stem - open loops: π± Sticky-3 2692-2694, π Bump-1 2737
2687 rpsH_gene symmetric: 105,107
2688 rpsH_gene normal: 4
2688 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2689 rpsH_gene normal: 28,31,41,56,57,64
2690 rpsH_gene normal: 2,74,79
2691 rpsH_gene flipped: 6,93
2694 rpsH_gene normal: 4
2694 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2738 rpsH_gene symmetric: 65,86
2740 rpsH_gene normal: 66
2741 rpsH_gene flipped: 62,112
2743 rpsH_gene flipped: 35,102,115
π± Sticky-3 2692-2694 with 3 candidates
2693 rpsH_gene flipped: 25,78
2693 rpsH_gene normal: 81
π Short stem 2695-2736 - 3-pair stem - open loops: πΈ Sticky loop 2698-2701 (4), πΈ Sticky loop 2730-2733 (4)
2695 rpsH_gene flipped: 4
2695 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2696 rpsH_gene symmetric: 105,107
2697 rpsH_gene normal: 18,67,76,118
2697 rpsH_gene flipped: 54
2701 rpsH_gene flipped: 35,102,115
2733 rpsH_gene normal: 66
2734 rpsH_gene symmetric: 105,107
2736 rpsH_gene symmetric: 105,107
πΈ Sticky loop 2698-2701 (4) with 9 candidates
2699 rpsH_gene flipped: 1,3,10,27,96,111
2699 rpsH_gene normal: 72,129
2700 rpsH_gene normal: 128
πΈ Sticky loop 2730-2733 (4) with 7 candidates
2730 rpsH_gene flipped: 6,93
2731 rpsH_gene normal: 28,57
2731 rpsH_gene flipped: 29,30
2732 rpsH_gene flipped: 66
βοΈ Belt 2702-2729 - (11-pair stem - open loops: πΈ Sticky loop 2713-2716 (4), π° Bump-2 2723-2724)
2702 rpsH_gene flipped: 53,68,123
2703 rpsH_gene normal: 17,44,82,98,100,109,120,122
2703 rpsH_gene flipped: 29,30
2704 rpsH_gene normal: 51,71,95,103,104,110
2706 rpsH_gene normal: 128
2707 rpsH_gene normal: 25,78
2707 rpsH_gene flipped: 81
2708 rpsH_gene normal: 6,93
2709 rpsH_gene normal: 13,15,77,88,114
2709 rpsH_gene flipped: 127
2710 rpsH_gene symmetric: 34,39
2712 rpsH_gene flipped: 18,67,76,118
2712 rpsH_gene normal: 54
2716 rpsH_gene normal: 53,68,123
2717 rpsH_gene flipped: 6,93
2718 rpsH_gene flipped: 25,78
2718 rpsH_gene normal: 81
2719 rpsH_gene flipped: 128
2721 rpsH_gene flipped: 23,70,119
2722 rpsH_gene flipped: 2,74,79
2727 rpsH_gene normal: 128
2728 rpsH_gene flipped: 35,102,115
2729 rpsH_gene symmetric: 80,84,117
πΈ Sticky loop 2713-2716 (4) with 6 candidates
2713 rpsH_gene flipped: 35,102,115
2714 rpsH_gene flipped: 53,68,123
π° Bump-2 2723-2724 with 5 candidates
2723 rpsH_gene normal: 5,9,48,90,113
π Short stem 2746-2780 - 3-pair stem - open loops: πΈ Sticky loop 2749-2752 (4), πΈ Sticky loop 2774-2777 (4)
2746 rpsH_gene normal: 62,112
2747 rpsH_gene flipped: 66
2752 rpsH_gene flipped: 1,3,10,27,96,111
2752 rpsH_gene normal: 72,129
2778 rpsH_gene normal: 128
2779 rpsH_gene normal: 62,112
πΈ Sticky loop 2749-2752 (4) with 10 candidates
2749 rpsH_gene normal: 66
2750 rpsH_gene flipped: 23,70,119
2751 rpsH_gene normal: 13,15,77,88,114
2751 rpsH_gene flipped: 127
πΈ Sticky loop 2774-2777 (4) with 5 candidates
2774 rpsH_gene normal: 23,70,119
2776 rpsH_gene symmetric: 105,107
π Medium stem 2753-2773 - (5-pair stem - open loops: π Sticky hub 2758-2768 (11)
2753 rpsH_gene flipped: 5,9,48,90,113
2755 rpsH_gene normal: 5,9,48,90,113
2757 rpsH_gene normal: 66
2768 rpsH_gene flipped: 4
2768 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2769 rpsH_gene flipped: 35,102,115
2770 rpsH_gene flipped: 53,68,123
2773 rpsH_gene normal: 53,68,123
π Sticky hub 2758-2768 (11) with 33 candidates
2758 rpsH_gene flipped: 23,70,119
2759 rpsH_gene normal: 13,15,77,88,114
2759 rpsH_gene flipped: 127
2760 rpsH_gene symmetric: 34,39
2761 rpsH_gene flipped: 13,15,77,88,114
2761 rpsH_gene normal: 127
2762 rpsH_gene normal: 23,70,119
2763 rpsH_gene flipped: 66
2765 rpsH_gene flipped: 51,71,95,103,104,110
2767 rpsH_gene flipped: 28,31,41,56,57,64
π Medium stem 2802-2816 - (6-pair stem - open loops: π± Sticky-3 2808-2810
2802 rpsH_gene flipped: 25,78
2802 rpsH_gene normal: 81
2803 rpsH_gene normal: 18,67,76,118
2803 rpsH_gene flipped: 54
2804 rpsH_gene normal: 12,26,55,106
2804 rpsH_gene flipped: 66
2805 rpsH_gene flipped: 12,26,55,106
2805 rpsH_gene normal: 66
2806 rpsH_gene flipped: 18,67,76,118
2806 rpsH_gene normal: 54
2807 rpsH_gene normal: 62,112
2810 rpsH_gene flipped: 28,57
2810 rpsH_gene normal: 29,30
2811 rpsH_gene normal: 28,57
2811 rpsH_gene flipped: 29,30
2812 rpsH_gene flipped: 66
2813 rpsH_gene flipped: 51,71,95,103,104,110
2814 rpsH_gene flipped: 13,15,77,88,114
2814 rpsH_gene normal: 127
2815 rpsH_gene normal: 35,102,115
2816 rpsH_gene normal: 4
2816 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
π± Sticky-3 2808-2810 with 2 candidates
2808 rpsH_gene flipped: 66
2809 rpsH_gene normal: 66
βοΈ Belt 2822-2900 - (9-pair stem - open loops: πΈ Sticky loop 2831-2837 (7), πΈ Sticky loop 2843-2846 (4), π± Sticky-3 2894-2896)
2822 rpsH_gene normal: 11,32,40,59,63,83,92,99
2822 rpsH_gene flipped: 25,78
2823 rpsH_gene flipped: 13,15,77,88,114
2823 rpsH_gene normal: 127
2824 rpsH_gene normal: 23,70,119
2825 rpsH_gene normal: 11,32,40,59,63,83,92,99
2825 rpsH_gene flipped: 25,78
2826 rpsH_gene flipped: 13,15,77,88,114
2826 rpsH_gene normal: 127
2827 rpsH_gene normal: 23,70,119
2828 rpsH_gene normal: 11,32,40,59,63,83,92,99
2828 rpsH_gene flipped: 25,78
2829 rpsH_gene flipped: 13,15,77,88,114
2829 rpsH_gene normal: 127
2830 rpsH_gene normal: 35,102,115
2837 rpsH_gene flipped: 28,57
2837 rpsH_gene normal: 29,30
2838 rpsH_gene normal: 6,93
2839 rpsH_gene flipped: 53,68,123
2840 rpsH_gene normal: 53,68,123
2841 rpsH_gene flipped: 6,93
2896 rpsH_gene flipped: 28,31,41,56,57,64
2899 rpsH_gene flipped: 51,71,95,103,104,110
2900 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2900 rpsH_gene normal: 29,30
πΈ Sticky loop 2831-2837 (7) with 24 candidates
2831 rpsH_gene normal: 4
2831 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2832 rpsH_gene flipped: 4
2832 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2833 rpsH_gene normal: 62,112
2835 rpsH_gene symmetric: 65,86
πΈ Sticky loop 2843-2846 (4) with 5 candidates
2843 rpsH_gene flipped: 25,78
2843 rpsH_gene normal: 81
2845 rpsH_gene symmetric: 105,107
π± Sticky-3 2894-2896 with 5 candidates
2894 rpsH_gene normal: 6,93
2895 rpsH_gene flipped: 2,74,79
βοΈ Belt 2847-2893 - (11-pair stem - open loops: π° Bump-2 2858-2859, π± Sticky-3 2878-2880, π Bump-1 2884, π Bump-1 2890)
2847 rpsH_gene symmetric: 105,107
2848 rpsH_gene flipped: 128
2850 rpsH_gene normal: 66
2851 rpsH_gene flipped: 23,70,119
2852 rpsH_gene symmetric: 80,84,117
2853 rpsH_gene symmetric: 8,20,24,97,116
2854 rpsH_gene normal: 13,15,77,88,114
2854 rpsH_gene flipped: 127
2855 rpsH_gene flipped: 11,32,40,59,63,83,92,99
2855 rpsH_gene normal: 25,78
2856 rpsH_gene flipped: 23,70,119
2857 rpsH_gene symmetric: 80,84,117
2873 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2873 rpsH_gene normal: 29,30
2874 rpsH_gene normal: 53,68,123
2875 rpsH_gene flipped: 6,93
2876 rpsH_gene flipped: 25,78
2876 rpsH_gene normal: 81
2877 rpsH_gene flipped: 128
2880 rpsH_gene normal: 5,9,48,90,113
2883 rpsH_gene normal: 128
2884 rpsH_gene normal: 62,112
2885 rpsH_gene flipped: 66
2886 rpsH_gene flipped: 51,71,95,103,104,110
2887 rpsH_gene flipped: 17,44,82,98,100,109,120,122
2887 rpsH_gene normal: 29,30
2888 rpsH_gene normal: 53,68,123
2889 rpsH_gene normal: 35,102,115
2891 rpsH_gene normal: 62,112
2893 rpsH_gene flipped: 28,57
2893 rpsH_gene normal: 29,30
π° Bump-2 2858-2859 with 3 candidates
2858 rpsH_gene normal: 23,70,119
π± Sticky-3 2878-2880 with 8 candidates
2878 rpsH_gene normal: 1,3,10,27,96,111
2878 rpsH_gene flipped: 72,129
π Short stem 2860-2872 - 1-pair stem - open loops: π° Bump-2 2861-2862
2860 rpsH_gene normal: 128
2862 rpsH_gene symmetric: 80,84,117
π° Bump-2 2861-2862 with 3 candidates
2861 rpsH_gene flipped: 35,102,115
π Medium stem 2863-2877 - (5-pair stem - open loops: πΈ Sticky loop 2868-2871 (4)
2863 rpsH_gene normal: 35,102,115
2864 rpsH_gene normal: 4
2864 rpsH_gene flipped: 16,21,38,51,71,95,103,104,110
2865 rpsH_gene flipped: 4
2865 rpsH_gene normal: 16,21,38,51,71,95,103,104,110
2866 rpsH_gene normal: 62,112
2872 rpsH_gene flipped: 51,71,95,103,104,110
πΈ Sticky loop 2868-2871 (4) with 11 candidates
2868 rpsH_gene flipped: 23,70,119
2869 rpsH_gene flipped: 2,74,79
2870 rpsH_gene normal: 5,9,48,90,113
============================================================
π JOURNEY SUMMARY:
π Bridge structures (stem pairs): 155
π Terminal stations (loops): 311
ποΈ Longest bridge: 18 base pairs
π Largest terminal: 20 nucleotides
π― POTENTIAL BINDING HOTSPOTS:
π Look for terminals >10 nt (protein landing zones)
π Check bulges 1-3 nt (fine-tuning sites)
π Monitor bridge intersections (assembly checkpoints)Free Open Source
Download the genetic rhythm analyzer, a Python program using the codon mapping model.
Rendered with Quarto from a template generated by the analyzer.
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